FFCP PHASE1:Hg19::chr22:22901399..22901408,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9336 | |||
|TSSclassifier=strong | |||
|UniProt=E7EMH2 | |||
|association_with_transcript=81bp_to_ENST00000420709_5end | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_6_at_PRAME_5end | |||
|id=chr22:22901399..22901408,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.23e-08;2!CL:0000242;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.87e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.19e-33!239;DOID:162!6.98e-32!235;DOID:0050687!3.13e-24!143;DOID:305!2.03e-15!106;DOID:0050686!2.32e-14!137;DOID:1036!1.43e-11!8;DOID:8692!4.52e-09!31;DOID:1240!6.85e-08!39;DOID:1909!5.79e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.92e-29;2!DOID:1036;5.51e-17;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.08e-29,2;DOID:1036,5.67e-17,8 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.25e-20!9;UBERON:0001557!9.63e-09!19;UBERON:0008947!4.21e-08!38;UBERON:0003258!4.21e-08!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.98e-15;15!UBERON:0007376;1.98e-15;15!UBERON:0010371;3.06e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.84e-15,15;UBERON:0007376,1.84e-15,15;UBERON:0007383,1.84e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.485442086998054,0,0.568272293612826,0,0,0,0,0,0,0,1.26675244876796,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,2.03036094555463,3.13700054908383,5.53811237020281,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0,0.529536760149002,0,0.822251547880505,0.19871461170299,0,0,0.320635281006135,0,0.19980960958213,0.144090417154106,1.03082936549324,1.20116498503375,0,0,0,0.543616824294456,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.082092520749339,0,1.69968137280189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.830091809617385,0,2.57803499820801,1.7127920012698,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0.33946505990805,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0.207216164163037,0,0,0,0.473328002922261,0.340853619036631,0,0.4582137370881,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0.356760272332706,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p6@PRAME | |||
}} |
Revision as of 14:48, 21 January 2014
Short description: | p6@PRAME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRAME_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 81bp_to_ENST00000420709_5end |
EntrezGene: | PRAME |
HGNC: | 9336 |
UniProt: | E7EMH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.84e-15 | 15 |
outer epithelium | 1.84e-15 | 15 |
enveloping layer of ectoderm | 1.84e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.08e-29 | 2 |
chronic leukemia | 5.67e-17 | 8 |