FFCP PHASE1:Hg19::chr22:29664248..29664294,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3508 | |||
|TSSclassifier=strong | |||
|UniProt=B0QYK0,Q96FE8,B0QYJ6,F8WC90 | |||
|association_with_transcript=0bp_to_ENST00000331029,ENST00000406548,ENST00000415761,ENST00000437155,ENST00000485037_5end | |||
|description=CAGE_peak_1_at_EWSR1_5end | |||
|id=chr22:29664248..29664294,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.35e-14!312;UBERON:0000483!1.68e-13!309;UBERON:0000924!1.80e-10!173;UBERON:0006601!1.80e-10!173;UBERON:0004121!1.98e-10!169;UBERON:0003075!6.20e-10!86;UBERON:0007284!6.20e-10!86;UBERON:0002346!7.46e-10!90;UBERON:0000064!1.28e-09!219;UBERON:0003056!2.39e-09!61;UBERON:0000475!9.07e-09!365;UBERON:0000073!2.33e-08!94;UBERON:0001016!2.33e-08!94;UBERON:0005743!3.26e-08!86;UBERON:0000033!5.68e-08!123;UBERON:0001017!6.04e-08!82;UBERON:0000481!1.63e-07!347;UBERON:0002616!3.61e-07!59;UBERON:0000153!6.47e-07!129;UBERON:0007811!6.47e-07!129;UBERON:0001049!7.00e-07!57;UBERON:0005068!7.00e-07!57;UBERON:0006241!7.00e-07!57;UBERON:0007135!7.00e-07!57;UBERON:0000025!8.60e-07!194;UBERON:0000955!8.70e-07!69;UBERON:0006238!8.70e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,7.23e-14,309;UBERON:0000483,5.01e-13,306;UBERON:0010371,2.14e-10,104;UBERON:0004121,3.62e-10,171;UBERON:0000924,3.62e-10,171;UBERON:0006601,3.62e-10,171;UBERON:0003075,5.88e-10,82;UBERON:0007284,5.88e-10,82;UBERON:0002346,7.29e-10,86;UBERON:0003056,1.06e-09,61;UBERON:0010314,3.06e-09,132;UBERON:0001016,2.16e-08,89;UBERON:0001017,2.88e-08,81;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001049,3.03e-07,56;UBERON:0005068,3.03e-07,56;UBERON:0006241,3.03e-07,56;UBERON:0007135,3.03e-07,56;UBERON:0000955,4.19e-07,68;UBERON:0006238,4.19e-07,68;UBERON:0000025,7.23e-07,192 | |||
|phase1_expression=20.1663000990318,31.2586764880835,25.3717927372748,33.024188456533,26.8176656656373,26.1701557230111,27.8629865985142,25.9005148105001,28.2080478455826,75.6860524424647,69.7801167972428,61.8189083128388,47.7418230593501,31.5604200048119,36.7851087057986,33.6162573225888,33.7508935693427,41.6276751520803,36.594959909288,100.836146564889,85.6802903225863,58.6160329164024,57.5334334133424,57.2135096804656,60.7626375638846,69.3069590133918,75.9430452411998,74.3816883414269,33.0425992553079,28.787204857291,50.7796884476729,40.4545338770728,63.2532429434325,56.9421175656853,51.7480899876415,55.8725083675567,24.3688364647923,37.6716877801677,34.4936449648644,37.7598915045582,11.6436046604761,8.74512898251245,16.4848363285879,35.3317720234342,36.2760905941257,39.2986179124262,33.0049232406072,41.9391245782262,46.7656620051606,35.0984718633024,52.2567841319365,39.4925323913937,51.3671064297562,54.8661981046252,74.484567626888,36.1425291921801,50.7605439107593,35.2815870578783,43.7699966090391,41.7207735198922,53.0649814413204,30.0164683169912,37.4991676328668,34.9504295436809,45.8530597033163,61.8449894913342,70.3789141365,33.4160724791469,39.6327017999353,40.8315028045619,38.1401686659022,50.8223137662839,50.9504443779824,19.0129757680748,15.0949052975181,17.820984868212,19.3205245571972,17.8710502481393,23.1444844843795,12.2555479808737,25.0635013270854,22.8330192205792,15.839662001519,12.561188059029,9.7846017924991,14.9355577898278,12.8126715851524,11.4950487990897,11.8988077101275,8.58648379081828,19.3532409497212,31.1235710366598,27.5236724250165,21.1474125726441,40.9171250976521,34.23993102076,22.8183333332046,11.7903228824749,13.7753004329671,18.2233279975839,11.7332015988093,13.7299863663073,19.4826728407911,18.1599044722833,13.5518717438425,14.8427709371026,14.3526047795458,19.9822458772053,21.0696143047003,18.5814832202154,14.3702009248641,14.2003512010176,11.8629250529648,15.5173680292034,24.0431704751447,21.0755377417473,10.3469533272519,11.3397057009268,22.2657328977163,11.4683549156675,5.85975108470777,7.60361635558699,20.1770659564216,20.2218845623981,11.2437653897111,13.969857870597,11.4957919568947,17.338179917327,20.5928950753301,20.7098897552403,39.0090986102339,44.9369576001436,39.3816690478073,52.4086770957621,22.560205978615,25.7826803750266,28.6302940938396,27.7381876072502,52.6558931603858,49.6673850316143,50.4171669878544,56.2555129262676,63.7516754511949,66.7411997011973,17.5255592573529,13.9303789839414,18.4811565121223,32.1962342812212,29.1717404497865,38.2601226369452,43.5289672133084,44.7321989455185,42.0040006945189,28.8307050381245,51.5984306538184,53.097782094433,46.8148725042456,36.4367630428754,30.9516648537438,37.4887086296431,56.7989337123897,34.2122447573331,33.4365018840992,65.8116913819105,34.8361037589157,46.0786597945852,45.5794626431125,51.4634465808783,64.392987735671,51.260345616679,44.3348220311586,38.2163210564583,38.7780264148325,49.7147219442489,30.3152890534144,43.3076349892863,94.8049734622647,89.7798622943787,51.4269154187618,34.2013336086807,33.0921886762085,36.0134620689054,46.0592332391654,38.9313842281398,59.6635946364124,63.1160473279364,42.0608424870399,101.929822847702,68.6752169026705,47.9196330097337,53.6520763180966,86.901528996386,68.6341284120878,75.5625340058097,53.6925470400369,55.5211114249191,42.3635702820638,30.8880742893334,24.4794259985771,56.4300044401576,47.4287973598717,61.6110177071882,65.8123414526532,58.7375924826468,61.4568669233173,30.0358039883039,26.5921364264676,45.4863054471684,109.427677770206,29.2573622681437,30.7301256681365,118.535982953339,49.2591089759738,78.0650836338256,27.5452947370753,135.527394789737,41.8004752141542,108.041655376481,21.4476263836557,36.6936548978703,102.242762644785,48.2602550510397,49.6812535469729,26.669997736535,48.5488094651686,49.6171950022977,71.2326443796837,63.8793483309559,58.6779411491068,61.3673445690993,66.6127046311659,75.5503133286968,57.8863269620319,46.3133475498877,35.9150795516449,42.7218493789421,23.1001434134267,54.539434818368,53.2727620646801,53.7454596640165,54.4852225298026,49.894392697161,58.3685723013298,52.9887041069446,53.7646814443448,62.3290394253152,70.1247681893416,103.77891261455,58.4435096090588,51.4530489849397,50.7020139287323,54.0554969172694,60.8513603881846,39.7316789473185,32.2229708982957,66.2251747752309,48.070625008978,43.8366837704716,63.735368508974,50.9236448371913,104.584466004614,93.5941306751621,49.0726562885929,67.8192869104199,47.0808863885645,38.5458415522067,26.3901742168668,29.2991394441281,45.831855081638,45.4997665910282,13.7881523408942,16.6143028248859,20.0652069089783,26.2454735162976,40.651675024124,48.7706334513809,41.2864789660131,45.0482604696641,46.7726868581558,35.4717531285079,29.4962253944307,39.5996700682875,41.218306677251,32.4443053905796,54.7986827741419,28.6491319168708,37.509583107215,30.7930402840869,45.6554067602756,32.4370502471431,44.017270625109,85.1074930181288,79.7806925964903,49.5766812149622,27.40560374064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| |||
|short_description=p1@EWSR1 | |||
}} |
Revision as of 15:09, 21 January 2014
Short description: | p1@EWSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EWSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331029, ENST00000406548, ENST00000415761, ENST00000437155, ENST00000485037_5end |
EntrezGene: | EWSR1 |
HGNC: | 3508 |
UniProt: | B0QYK0Q96FE8B0QYJ6F8WC90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 7.23e-14 | 309 |
epithelium | 5.01e-13 | 306 |
ecto-epithelium | 2.14e-10 | 104 |
ectoderm-derived structure | 3.62e-10 | 171 |
ectoderm | 3.62e-10 | 171 |
presumptive ectoderm | 3.62e-10 | 171 |
neural plate | 5.88e-10 | 82 |
presumptive neural plate | 5.88e-10 | 82 |
neurectoderm | 7.29e-10 | 86 |
pre-chordal neural plate | 1.06e-09 | 61 |
structure with developmental contribution from neural crest | 3.06e-09 | 132 |
nervous system | 2.16e-08 | 89 |
central nervous system | 2.88e-08 | 81 |
regional part of nervous system | 1.99e-07 | 53 |
regional part of brain | 1.99e-07 | 53 |
neural tube | 3.03e-07 | 56 |
neural rod | 3.03e-07 | 56 |
future spinal cord | 3.03e-07 | 56 |
neural keel | 3.03e-07 | 56 |
brain | 4.19e-07 | 68 |
future brain | 4.19e-07 | 68 |
tube | 7.23e-07 | 192 |