FFCP PHASE1:Hg19::chr22:43026936..43026976,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2873 | |||
|TSSclassifier=strong | |||
|UniProt=P00387 | |||
|association_with_transcript=-15bp_to_AJ310899,AJ310900_5end | |||
|coexpression_cluster_id=C2647 | |||
|description=CAGE_peak_4_at_CYB5R3_5end | |||
|id=chr22:43026936..43026976,- | |||
|ontology_enrichment_celltype=CL:0000055!5.06e-16!180;CL:0002371!1.09e-14!591;CL:0000144!4.48e-13!625;CL:0000057!2.33e-11!75;CL:0000222!1.15e-10!119;CL:0000220!3.32e-09!246;CL:0002321!4.47e-09!248;CL:0000723!7.97e-09!436;CL:0000183!8.89e-09!59;CL:0000548!1.15e-08!679;CL:0000004!1.15e-08!679;CL:0000255!1.15e-08!679;CL:0000048!2.00e-08!430;CL:0000034!2.71e-08!444;CL:0000012!3.55e-08!682;CL:0000136!6.02e-08!15;CL:0000680!6.12e-08!57;CL:0000056!6.12e-08!57;CL:0000355!6.12e-08!57;CL:0000192!7.82e-08!42;CL:0000514!7.82e-08!42;CL:0000187!2.92e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.40e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.54e-12,76;CL:0000222,1.37e-10,121;CL:0000723,6.99e-10,433;CL:0000048,1.92e-09,427;CL:0000034,3.14e-09,441;CL:0000136,2.56e-08,15;CL:0000680,6.26e-08,58;CL:0000056,6.26e-08,58;CL:0000355,6.26e-08,58;CL:0002321,8.50e-08,250;CL:0000192,1.34e-07,43;CL:0000514,1.34e-07,43;CL:0000187,3.16e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!8.64e-12!143;UBERON:0003914!2.71e-10!118;UBERON:0002049!4.06e-10!79;UBERON:0007798!4.06e-10!79;UBERON:0000055!1.19e-09!69;UBERON:0000914!4.16e-09!83;UBERON:0002329!4.16e-09!83;UBERON:0003077!4.16e-09!83;UBERON:0003059!4.16e-09!83;UBERON:0007282!4.16e-09!83;UBERON:0009618!4.16e-09!83;UBERON:0007285!4.16e-09!83;UBERON:0004290!8.16e-09!70;UBERON:0001981!1.06e-08!60;UBERON:0007500!1.06e-08!60;UBERON:0004537!1.06e-08!60;UBERON:0006965!1.06e-08!60;UBERON:0004872!2.64e-08!84;UBERON:0000468!3.25e-08!659;UBERON:0000486!5.33e-08!82;UBERON:0001134!2.83e-07!61;UBERON:0002036!2.83e-07!61;UBERON:0003082!2.83e-07!61;UBERON:0002385!3.24e-07!63;UBERON:0001015!3.24e-07!63;UBERON:0000383!3.24e-07!63;UBERON:0003102!3.51e-07!95;UBERON:0000926!5.18e-07!448;UBERON:0004120!5.18e-07!448;UBERON:0006603!5.18e-07!448;UBERON:0002100!5.61e-07!216;UBERON:0001637!6.21e-07!42;UBERON:0003509!6.21e-07!42;UBERON:0004572!6.21e-07!42;UBERON:0001009!6.57e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.84e-11,78;UBERON:0005256,6.63e-11,122;UBERON:0003914,4.97e-10,117;UBERON:0000926,1.00e-09,315;UBERON:0004120,1.00e-09,315;UBERON:0006603,1.00e-09,315;UBERON:0002049,1.90e-09,78;UBERON:0007798,1.90e-09,78;UBERON:0003104,3.50e-09,160;UBERON:0009142,3.50e-09,160;UBERON:0002329,5.38e-09,71;UBERON:0003059,5.38e-09,71;UBERON:0007282,5.38e-09,71;UBERON:0004290,5.38e-09,71;UBERON:0009618,5.38e-09,71;UBERON:0000055,5.46e-09,68;UBERON:0007524,7.85e-09,73;UBERON:0003077,8.04e-09,72;UBERON:0007285,8.04e-09,72;UBERON:0007500,5.50e-08,59;UBERON:0001981,5.50e-08,59;UBERON:0004537,5.50e-08,59;UBERON:0006965,5.50e-08,59;UBERON:0000486,6.17e-08,83;UBERON:0004872,1.18e-07,83;UBERON:0002199,1.80e-07,46;UBERON:0002416,1.80e-07,46;UBERON:0000490,3.03e-07,148;UBERON:0001134,3.18e-07,62;UBERON:0002036,3.18e-07,62;UBERON:0003082,3.18e-07,62;UBERON:0002385,3.58e-07,64;UBERON:0001015,3.58e-07,64;UBERON:0000383,3.58e-07,64 | |||
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| |||
|short_description=p4@CYB5R3 | |||
}} |
Revision as of 16:23, 21 January 2014
Short description: | p4@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYB5R3_5end |
Coexpression cluster: | C2647_Adipocyte_Preadipocyte_tenocyte_Osteoblast_basal_Mesenchymal_Olfactory |
Association with transcript: | -15bp_to_AJ310899, AJ310900_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | P00387 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.54e-12 | 76 |
mesodermal cell | 1.37e-10 | 121 |
somatic stem cell | 6.99e-10 | 433 |
multi fate stem cell | 1.92e-09 | 427 |
stem cell | 3.14e-09 | 441 |
fat cell | 2.56e-08 | 15 |
muscle precursor cell | 6.26e-08 | 58 |
myoblast | 6.26e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.26e-08 | 58 |
embryonic cell | 8.50e-08 | 250 |
smooth muscle cell | 1.34e-07 | 43 |
smooth muscle myoblast | 1.34e-07 | 43 |
muscle cell | 3.16e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.84e-11 | 78 |
trunk mesenchyme | 6.63e-11 | 122 |
epithelial tube | 4.97e-10 | 117 |
mesoderm | 1.00e-09 | 315 |
mesoderm-derived structure | 1.00e-09 | 315 |
presumptive mesoderm | 1.00e-09 | 315 |
vasculature | 1.90e-09 | 78 |
vascular system | 1.90e-09 | 78 |
mesenchyme | 3.50e-09 | 160 |
entire embryonic mesenchyme | 3.50e-09 | 160 |
somite | 5.38e-09 | 71 |
presomitic mesoderm | 5.38e-09 | 71 |
presumptive segmental plate | 5.38e-09 | 71 |
dermomyotome | 5.38e-09 | 71 |
trunk paraxial mesoderm | 5.38e-09 | 71 |
vessel | 5.46e-09 | 68 |
dense mesenchyme tissue | 7.85e-09 | 73 |
paraxial mesoderm | 8.04e-09 | 72 |
presumptive paraxial mesoderm | 8.04e-09 | 72 |
epithelial tube open at both ends | 5.50e-08 | 59 |
blood vessel | 5.50e-08 | 59 |
blood vasculature | 5.50e-08 | 59 |
vascular cord | 5.50e-08 | 59 |
multilaminar epithelium | 6.17e-08 | 83 |
splanchnic layer of lateral plate mesoderm | 1.18e-07 | 83 |
integument | 1.80e-07 | 46 |
integumental system | 1.80e-07 | 46 |
unilaminar epithelium | 3.03e-07 | 148 |
skeletal muscle tissue | 3.18e-07 | 62 |
striated muscle tissue | 3.18e-07 | 62 |
myotome | 3.18e-07 | 62 |
muscle tissue | 3.58e-07 | 64 |
musculature | 3.58e-07 | 64 |
musculature of body | 3.58e-07 | 64 |