FFCP PHASE1:Hg19::chr3:5021113..5021180,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1046 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000467610_5end | |||
|coexpression_cluster_id=C4335 | |||
|description=CAGE_peak_1_at_BHLHE40_5end | |||
|id=chr3:5021113..5021180,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.38e-19!76;CL:0002057!5.54e-18!42;CL:0000557!1.80e-16!71;CL:0000860!7.48e-16!45;CL:0000738!4.85e-14!140;CL:0000839!6.44e-14!70;CL:0002009!7.08e-14!65;CL:0002194!8.28e-13!63;CL:0000576!8.28e-13!63;CL:0000040!8.28e-13!63;CL:0000559!8.28e-13!63;CL:0000763!1.32e-10!112;CL:0000049!1.32e-10!112;CL:0002031!2.42e-08!124;CL:0000037!1.75e-07!172;CL:0000566!1.75e-07!172;CL:0000988!1.82e-07!182;CL:0002087!2.81e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-17;33!CL:0002057;8.29e-17;33!CL:0000473;2.55e-15;39!CL:0000234;2.55e-15;39!CL:0000766;4.23e-10;69!CL:0000576;5.96e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.23e-21,72;CL:0000473,1.80e-19,48;CL:0000234,1.80e-19,48;CL:0000860,5.54e-18,42;CL:0002057,5.54e-18,42;CL:0000557,8.96e-18,67;CL:0002009,4.37e-15,61;CL:0000839,4.72e-15,66;CL:0000738,1.12e-14,136;CL:0002194,5.77e-14,59;CL:0000576,5.77e-14,59;CL:0000040,5.77e-14,59;CL:0000559,5.77e-14,59;CL:0000763,3.30e-11,108;CL:0000049,3.30e-11,108;CL:0002031,8.49e-09,120;CL:0000988,6.41e-08,177;CL:0000037,8.28e-08,168;CL:0002087,1.07e-07,115;CL:0002032,5.61e-07,161;CL:0000837,5.61e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.28e-15!102;UBERON:0003061!8.28e-15!102;UBERON:0002371!3.92e-14!80;UBERON:0002193!1.41e-12!112;UBERON:0001474!1.56e-12!86;UBERON:0002405!4.91e-11!115;UBERON:0003081!5.89e-10!216;UBERON:0004765!2.15e-08!101;UBERON:0001434!2.15e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.13e-15,98;UBERON:0003061,1.13e-15,98;UBERON:0002371,3.71e-15,76;UBERON:0001474,2.12e-13,82;UBERON:0002193,2.84e-13,108;UBERON:0002405,5.60e-12,93;UBERON:0004765,4.00e-11,90;UBERON:0003081,5.66e-09,203;UBERON:0001434,7.77e-08,100 | |||
|phase1_expression=32.1570731308885,46.8880147321253,30.5871056888257,15.0109947529696,18.7723659659461,46.2339417773195,45.5939780702959,42.3252315195977,2.61185628199839,155.795315741957,209.340350391728,164.70479458615,203.628107192366,25.2483360038495,13.5872924048445,25.5483555651675,19.8889194247912,34.3245742482065,20.9811103479918,33.4889277968863,28.7640974654397,59.5563970808367,38.6418582626927,37.6404668950432,56.8708157364457,200.66160349412,177.911977338032,183.632252804814,1091.58586825571,683.983987409233,651.156614667416,103.894598366119,174.097021053829,137.918245792212,0,1.84820002233648,33.4704500841726,729.611953036483,878.585224366691,616.310872833019,43.6635174767852,41.1344955844104,45.8484510388852,180.003019609101,351.046751686904,294.739634343197,385.599772226531,610.995481600433,637.066004931228,434.703204798769,515.907662949609,501.578809593689,624.679173494753,749.407717640822,812.558919566051,342.789300307083,424.096157189892,336.635779698737,455.146747955532,566.118803762229,660.43525095041,200.219739213337,343.47641842445,330.750406413371,269.314173447326,285.962153244334,317.639346987743,380.641727863966,623.172087512141,562.519107786252,153.771473668876,360.543805631826,265.511943062902,188.22846010394,186.028762469413,159.759887877382,173.547735121335,143.869463342163,141.920693053522,37.3366694301036,18.4992509795154,19.7277286065805,12.3197371122926,18.5687127829125,10.6741110463627,8.53460445133014,8.80871171479227,10.3455439191807,12.5598525829124,10.494591299889,62.0442136329299,245.465145157052,176.992504621981,567.014999604021,627.76959053932,15.8030450865046,71.0122270110937,207.509682731559,257.824279745385,100.311897234407,4.23698946623668,0.946895611469467,0,242.651975095908,27.3983493951599,17.5011776721061,5.41607727530031,91.9695675630348,123.946558224564,217.38690988606,183.496411809803,251.549078418026,4.15202376853769,1.07016331235885,1.04535523804977,142.656462456236,173.215663108068,64.2583323052518,99.4367389636646,27.7151910461964,27.996588515826,28.5135613334512,37.794354888521,39.9318226801785,48.7229833554149,35.7533650586466,50.9099358091049,519.74218403336,652.554077711758,236.353427136728,60.9517165784904,24.1452309493309,61.6297548085816,40.1197459146869,64.6725904720298,80.8243575801396,347.53995886133,301.226984717332,91.4151681976536,92.9046175368143,111.198838687498,143.094639981251,165.754356173107,131.257692745688,35.0511185147058,38.4826719431381,69.5370133513665,587.879388912668,622.902457839559,547.528356959779,51.6782259153433,35.2696183993511,71.5109433311644,25.4388573865804,30.6234588433231,39.3418799974296,17.5555771890921,29.4595105453035,23.1248070746362,43.1789590466425,16.516002001475,18.2465305372443,8.29810995663776,18.0154909369476,84.254762579703,19.5566404942135,24.9227603615048,23.1979649795644,21.4643292452237,41.7676890209977,30.594691236378,694.482799888053,445.947303770574,162.663081449165,156.546164784025,39.0021975926906,43.8274388491754,75.7248678776868,70.9336764396714,25.7911696065461,109.951465601596,91.020325365932,16.4941848761876,34.8900640660492,16.6731141175728,28.4551963972471,46.0940739583999,2.10889288650417,34.9619286049959,21.1074573971446,23.7623402077364,7.39837341455719,8.90301194024723,8.56749920883716,14.9032545016072,6.38738450021193,36.7839780985725,28.5120685747693,19.0395535544489,85.5551680221745,116.416138974231,3.19838616512726,8.50805935129356,18.0091675064719,30.2894558407778,19.3087311353382,28.9959453689732,55.8086341147303,39.6451094872385,26.4811162135024,32.425580877413,25.2076520710898,34.522597294877,57.1961998901297,29.7786970130544,32.2362794580819,42.9697192760886,20.1947019395292,15.2802831746217,10.345347636404,36.2109784366947,13.4000290642762,26.4514524004361,111.898033981549,124.09948486883,110.419769224766,9.14802795971965,2.25300606146525,60.8856260636276,42.9156767763634,37.343485929593,5.10968302706162,15.6449532329816,39.237697229766,23.4829366299217,14.3954057689914,15.1594691150613,92.7525312312376,124.246916587561,62.9038787995888,126.617480696788,161.666547516565,82.5701754506616,73.8875568717701,74.3679352825062,80.0274086448492,19.9301972748655,143.046609279515,42.8036971784656,69.0940943512047,141.965639000451,244.723976952729,164.23959405743,2.6487785964879,25.8275720940538,103.283821799712,169.783691527144,93.2934552038242,140.640032403872,127.957231209088,11.4032906858614,48.8769349081402,59.175850230362,48.227048469632,127.271024551631,19.9225697910282,40.2797395941651,14.2690614175949,33.1885847142896,29.1885295112257,82.2364800331907,133.850439659644,115.486413098342,60.926992091405,155.383468583945,123.202559503634,42.0029471476359,61.6143949649599,109.64744624125,1594.25823783127,735.996859916557,1118.94983957355,539.873345499937,1031.7794083938,33.7173818691418,67.6119513238151,62.1252470213249,80.4040496306715,46.2723717164956,63.9730713207544,57.7369393913768,24.8931007246701,46.647727365161,17.2344971679233,173.35337083118,57.2250313363012,81.994366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| |||
|short_description=p1@BHLHE40 | |||
}} |
Revision as of 17:03, 21 January 2014
Short description: | p1@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BHLHE40_5end |
Coexpression cluster: | C4335_Mast_Basophils_immature_CD14_Eosinophils_serous_CD8 |
Association with transcript: | 0bp_to_ENST00000467610_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.23e-21 | 72 |
defensive cell | 1.80e-19 | 48 |
phagocyte | 1.80e-19 | 48 |
classical monocyte | 5.54e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.54e-18 | 42 |
granulocyte monocyte progenitor cell | 8.96e-18 | 67 |
macrophage dendritic cell progenitor | 4.37e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.72e-15 | 66 |
leukocyte | 1.12e-14 | 136 |
monopoietic cell | 5.77e-14 | 59 |
monocyte | 5.77e-14 | 59 |
monoblast | 5.77e-14 | 59 |
promonocyte | 5.77e-14 | 59 |
myeloid cell | 3.30e-11 | 108 |
common myeloid progenitor | 3.30e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
hematopoietic cell | 6.41e-08 | 177 |
hematopoietic stem cell | 8.28e-08 | 168 |
nongranular leukocyte | 1.07e-07 | 115 |
hematopoietic oligopotent progenitor cell | 5.61e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.61e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.13e-15 | 98 |
blood island | 1.13e-15 | 98 |
bone marrow | 3.71e-15 | 76 |
bone element | 2.12e-13 | 82 |
hemolymphoid system | 2.84e-13 | 108 |
immune system | 5.60e-12 | 93 |
skeletal element | 4.00e-11 | 90 |
lateral plate mesoderm | 5.66e-09 | 203 |
skeletal system | 7.77e-08 | 100 |