FFCP PHASE1:Hg19::chr3:14166625..14166649,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28472 | |||
|TSSclassifier=strong | |||
|UniProt=F8WDL3 | |||
|association_with_transcript=110bp_to_ENST00000432444_5end | |||
|coexpression_cluster_id=C4288 | |||
|description=CAGE_peak_1_at_TMEM43_5end | |||
|id=chr3:14166625..14166649,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.83e-23!180;CL:0000057!2.63e-17!75;CL:0002371!9.58e-13!591;CL:0000144!1.05e-12!625;CL:0000548!1.05e-11!679;CL:0000004!1.05e-11!679;CL:0000255!1.05e-11!679;CL:0000012!5.11e-11!682;CL:0000222!2.76e-10!119;CL:0000136!1.32e-09!15;CL:0000048!7.05e-09!430;CL:0002620!1.80e-08!23;CL:0000723!2.92e-08!436;CL:0000680!7.59e-08!57;CL:0000056!7.59e-08!57;CL:0000355!7.59e-08!57;CL:0000220!2.78e-07!246;CL:0000187!3.48e-07!54;CL:0000183!4.17e-07!59;CL:0000192!8.44e-07!42;CL:0000514!8.44e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.76e-08;23!CL:0000136;1.95e-08;13!CL:0000057;3.77e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.37e-17,76;CL:0000222,1.94e-10,121;CL:0000048,1.18e-09,427;CL:0000136,1.31e-09,15;CL:0000723,5.32e-09,433;CL:0002620,1.79e-08,23;CL:0000680,4.11e-08,58;CL:0000056,4.11e-08,58;CL:0000355,4.11e-08,58;CL:0000187,1.91e-07,55;CL:0000034,2.86e-07,441;CL:0000192,4.52e-07,43;CL:0000514,4.52e-07,43;CL:0002321,6.99e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.03e-14!448;UBERON:0004120!1.03e-14!448;UBERON:0006603!1.03e-14!448;UBERON:0000468!3.69e-12!659;UBERON:0004872!5.03e-11!84;UBERON:0002204!3.60e-10!167;UBERON:0003102!5.66e-10!95;UBERON:0000467!1.68e-09!625;UBERON:0002049!1.93e-09!79;UBERON:0007798!1.93e-09!79;UBERON:0000480!3.24e-09!626;UBERON:0000055!5.37e-09!69;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0000914!1.17e-08!83;UBERON:0002329!1.17e-08!83;UBERON:0003077!1.17e-08!83;UBERON:0003059!1.17e-08!83;UBERON:0007282!1.17e-08!83;UBERON:0009618!1.17e-08!83;UBERON:0007285!1.17e-08!83;UBERON:0002385!2.63e-08!63;UBERON:0001015!2.63e-08!63;UBERON:0000383!2.63e-08!63;UBERON:0001134!2.79e-08!61;UBERON:0002036!2.79e-08!61;UBERON:0003082!2.79e-08!61;UBERON:0003081!3.20e-08!216;UBERON:0004290!5.63e-08!70;UBERON:0001637!7.21e-08!42;UBERON:0003509!7.21e-08!42;UBERON:0004572!7.21e-08!42;UBERON:0000486!1.29e-07!82;UBERON:0004573!2.37e-07!33;UBERON:0004571!2.37e-07!33;UBERON:0002199!2.60e-07!45;UBERON:0002416!2.60e-07!45;UBERON:0004535!4.46e-07!110;UBERON:0001009!6.16e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.97e-07;33!UBERON:0004571;7.97e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.75e-18,315;UBERON:0004120,5.75e-18,315;UBERON:0006603,5.75e-18,315;UBERON:0002204,5.68e-12,167;UBERON:0004872,5.21e-11,83;UBERON:0003102,2.02e-10,99;UBERON:0003081,3.74e-10,203;UBERON:0002049,2.02e-09,78;UBERON:0007798,2.02e-09,78;UBERON:0000055,5.68e-09,68;UBERON:0007500,1.12e-08,59;UBERON:0001981,1.12e-08,59;UBERON:0004537,1.12e-08,59;UBERON:0006965,1.12e-08,59;UBERON:0002385,1.43e-08,64;UBERON:0001015,1.43e-08,64;UBERON:0000383,1.43e-08,64;UBERON:0001134,1.51e-08,62;UBERON:0002036,1.51e-08,62;UBERON:0003082,1.51e-08,62;UBERON:0002329,3.13e-08,71;UBERON:0003059,3.13e-08,71;UBERON:0007282,3.13e-08,71;UBERON:0004290,3.13e-08,71;UBERON:0009618,3.13e-08,71;UBERON:0007524,4.36e-08,73;UBERON:0001637,7.16e-08,42;UBERON:0003509,7.16e-08,42;UBERON:0004572,7.16e-08,42;UBERON:0007503,7.26e-08,78;UBERON:0000486,7.38e-08,83;UBERON:0003077,8.63e-08,72;UBERON:0007285,8.63e-08,72;UBERON:0002199,9.97e-08,46;UBERON:0002416,9.97e-08,46;UBERON:0005256,2.13e-07,122;UBERON:0004573,2.35e-07,33;UBERON:0004571,2.35e-07,33;UBERON:0004535,4.85e-07,109;UBERON:0001009,6.71e-07,112 | |||
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| |||
|short_description=p1@TMEM43 | |||
}} |
Revision as of 17:32, 21 January 2014
Short description: | p1@TMEM43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM43_5end |
Coexpression cluster: | C4288_Fibroblast_amniotic_Smooth_Synoviocyte_salivary_gastric_Chondrocyte |
Association with transcript: | 110bp_to_ENST00000432444_5end |
EntrezGene: | TMEM43 |
HGNC: | 28472 |
UniProt: | F8WDL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.37e-17 | 76 |
mesodermal cell | 1.94e-10 | 121 |
multi fate stem cell | 1.18e-09 | 427 |
fat cell | 1.31e-09 | 15 |
somatic stem cell | 5.32e-09 | 433 |
skin fibroblast | 1.79e-08 | 23 |
muscle precursor cell | 4.11e-08 | 58 |
myoblast | 4.11e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 58 |
muscle cell | 1.91e-07 | 55 |
stem cell | 2.86e-07 | 441 |
smooth muscle cell | 4.52e-07 | 43 |
smooth muscle myoblast | 4.52e-07 | 43 |
embryonic cell | 6.99e-07 | 250 |