FFCP PHASE1:Hg19::chr3:45985001..45985010,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16647 | |||
|TSSclassifier=weak | |||
|UniProt=A0N0N3,O00574 | |||
|association_with_transcript=28bp_to_NM_006564,uc003cpc.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_CXCR6_5end | |||
|id=chr3:45985001..45985010,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.12e-30!18;CL:0000789!6.12e-30!18;CL:0002420!6.12e-30!18;CL:0002419!6.12e-30!18;CL:0000790!6.12e-30!18;CL:0000625!8.03e-28!11;CL:0000084!7.39e-26!25;CL:0000827!7.39e-26!25;CL:0000838!2.35e-14!52;CL:0000542!5.55e-14!53;CL:0000051!5.55e-14!53;CL:0000738!7.39e-12!140;CL:0002087!1.55e-10!119;CL:0002031!9.16e-10!124;CL:0000898!9.20e-09!3;CL:0000037!4.42e-08!172;CL:0000566!4.42e-08!172;CL:0002032!4.81e-08!165;CL:0000837!4.81e-08!165;CL:0002619!8.32e-08!3;CL:0000623!8.72e-08!3;CL:0000825!8.72e-08!3;CL:0000988!3.38e-07!182;CL:0000624!4.68e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.68e-68;11!CL:0000791;2.65e-58;18!CL:0000789;2.65e-58;18!CL:0002419;2.65e-58;18!CL:0000084;2.70e-41;25!CL:0000542;9.56e-12;53!CL:0000898;3.59e-10;3!CL:0000895;3.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.75e-68,11;CL:0000791,2.79e-58,18;CL:0000789,2.79e-58,18;CL:0002420,2.79e-58,18;CL:0002419,2.79e-58,18;CL:0000790,2.79e-58,18;CL:0000084,2.81e-41,25;CL:0000827,2.81e-41,25;CL:0000838,1.40e-21,52;CL:0000542,4.02e-21,53;CL:0000051,4.02e-21,53;CL:0000898,3.68e-10,3;CL:0000810,3.32e-08,1;CL:0000895,3.32e-08,1;CL:0002436,3.32e-08,1;CL:0002427,3.32e-08,1;CL:0002428,3.32e-08,1;CL:0002429,3.32e-08,1;CL:0002433,3.32e-08,1;CL:0002431,3.32e-08,1;CL:0002432,3.32e-08,1;CL:0002087,3.57e-08,115;CL:0002031,1.00e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-58;18!CL:0000051;9.56e-12;53!CL:0002427;3.20e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.82e-12!15;UBERON:0000179!2.82e-12!15;UBERON:0000463!2.82e-12!15;UBERON:0007023!3.10e-12!115;UBERON:0002193!5.79e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.19e-10;15!UBERON:0000179;2.19e-10;15!UBERON:0000463;2.19e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.63e-10,15;UBERON:0000179,2.63e-10,15;UBERON:0000463,2.63e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,3.8452893939856,0.32592226663359,0,0,5.01347055983281,7.36514768687093,5.98141515375777,2.70803863765016,2.43373507478783,2.9913649938772,6.9063919933544,6.63240042686036,6.37566788617116,0,0,0,4.75899239329778,6.51474839123266,2.40539211837841,1.51811815211702,2.54852331459277,2.60433381542567,4.75226022224187,2.86092726247768,3.71161172347813,2.49861453104692,2.8413270245282,4.10563998460523,2.21767417547206,1.06976078313403,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,2.29391162142713,1.13929437434833,0.714695326373367,0.411362273086194,2.59389324477087,1.08006287447623,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.926089897295336,0.218559560503957,0,0,0,0,0,0,0,0.751871343838829,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p4@CXCR6 | |||
}} |
Revision as of 18:34, 21 January 2014
Short description: | p4@CXCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CXCR6_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 28bp_to_NM_006564, uc003cpc.1_5end |
EntrezGene: | CXCR6 |
HGNC: | 16647 |
UniProt: | A0N0N3O00574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.75e-68 | 11 |
mature alpha-beta T cell | 2.79e-58 | 18 |
alpha-beta T cell | 2.79e-58 | 18 |
immature T cell | 2.79e-58 | 18 |
mature T cell | 2.79e-58 | 18 |
immature alpha-beta T cell | 2.79e-58 | 18 |
T cell | 2.81e-41 | 25 |
pro-T cell | 2.81e-41 | 25 |
lymphoid lineage restricted progenitor cell | 1.40e-21 | 52 |
lymphocyte | 4.02e-21 | 53 |
common lymphoid progenitor | 4.02e-21 | 53 |
naive T cell | 3.68e-10 | 3 |
CD4-positive, alpha-beta thymocyte | 3.32e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.32e-08 | 1 |
mature CD4 single-positive thymocyte | 3.32e-08 | 1 |
resting double-positive thymocyte | 3.32e-08 | 1 |
double-positive blast | 3.32e-08 | 1 |
CD69-positive double-positive thymocyte | 3.32e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.32e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.32e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.32e-08 | 1 |
nongranular leukocyte | 3.57e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.00e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 2.63e-10 | 15 |
haemolymphatic fluid | 2.63e-10 | 15 |
organism substance | 2.63e-10 | 15 |