FFCP PHASE1:Hg19::chr3:46607722..46607747,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79442 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14676 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469912_5end | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_2_at_LRRC2_5end | |||
|id=chr3:46607722..46607747,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.75e-08;2!CL:0000558;5.75e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.98e-08,2;CL:0000765,5.98e-08,2;CL:0000050,5.98e-08,2;CL:0000038,5.98e-08,2;CL:0000558,5.98e-08,2;CL:0000547,5.98e-08,2;CL:0000549,5.98e-08,2;CL:0000550,5.98e-08,2;CL:0000552,5.98e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;1.30e-07;2!DOID:114;1.41e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.36e-08,2;DOID:3350,9.55e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-36!115;UBERON:0001049!5.61e-09!57;UBERON:0005068!5.61e-09!57;UBERON:0006241!5.61e-09!57;UBERON:0007135!5.61e-09!57;UBERON:0002616!4.27e-07!59;UBERON:0003080!8.98e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.28e-08;2!UBERON:0001630;3.28e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.11e-19,114;UBERON:0005090,3.24e-08,2;UBERON:0001630,3.24e-08,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.501559486172034,0,0,0,0.334231370655521,2.06224135232386,0.664601683750863,1.35401931882508,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.529636723252875,0.573673241497627,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0,0,1.05965950579781,0,0.309157587715317,0,0.558350568994769,0,0.0974370051611986,0.252433774244115,0.828449087780694,0,0,0,0.339121184620975,0.193260853163297,0,0,0.243947412259191,1.06023814657188,0.813357600086629,0.310983165046111,0,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,2.36315962672562,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,0.381988425558278,2.34434894420094,0,0.205654985406647,0,0.857479297891735,0.112131084345361,0,0,0.646358578788889,0,0,1.32969058292435,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0.718874566474748,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.512556597022804,0,0.64341568457443,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94667777962682,3.39866086332371,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,1.75809815126273,0,0,0,0,0,0,0.994147647766298,2.2507106625682,0,0,0,0,0,0,3.98847861758404,0,3.42143546427988,0.0898683511473268,0,0,1.08507746200627,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,1.43753037910592,0.591095237907095,0.438770794307945,0,0,1.61595542857974,0.227884111694002,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.134802265961354,5.61804353109152,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,7.56738542875113,0,0,0,0.387956065953678,0,1.12990370390266,0,0,1.13959432720582,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,4.35404805622199,0,1.79711100449092,5.57993862577542,10.9354014146518,6.98708113861953,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0.803765742325096,2.20063098555574,1.24632101408756,0,0,1.09349201984444,0,0.86686278029118,0.734364233889974,0,0,0,2.85878130549347,11.9176554665778,0,1.08599920350743,0,0.979762080328227,0,0,0,0,0.879313402068495,2.65013777824443,0.517131825446202,0.39669780522807,0,0,0.640724475406168,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0.886068179966986,0.488105059607853,1.251909307065,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0.907385542579434,0,0,0.318593534327405,0,0.310525913752519,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0.406870733204662,1.09109195521536,0.322231671127465,1.39210127963548,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0.877136198314828,0,0.38582807654183,0,0,0,0,0.967809053062115,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.215649622793364,0,0.655257829152084,0.169732529954025,0.212574920101683,0,0,0.318004350653419,0.315446980005013,0,0,0.918736432059601,0.513833800771676,0,0.638535436228605,0.82046545696302,0,0.345786262321089,1.13032951942296,0,0,0,0,0,0,0,0,1.35378591028663,0,0.781514011233092,0,0.163771917510097,0,0.607838261565552,0,0.206686796501184,0.380494861163441,0,0,3.47347824872506,0,0,1.07140367175657,0.672567444437648,0.6069656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| |||
|short_description=p2@LRRC2 | |||
}} |
Revision as of 18:40, 21 January 2014
Short description: | p2@LRRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC2_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000469912_5end |
EntrezGene: | LRRC2 |
HGNC: | 14676 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.98e-08 | 2 |
erythroblast | 5.98e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 5.98e-08 | 2 |
erythroid progenitor cell | 5.98e-08 | 2 |
reticulocyte | 5.98e-08 | 2 |
proerythroblast | 5.98e-08 | 2 |
basophilic erythroblast | 5.98e-08 | 2 |
polychromatophilic erythroblast | 5.98e-08 | 2 |
orthochromatic erythroblast | 5.98e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.11e-19 | 114 |
muscle structure | 3.24e-08 | 2 |
muscle organ | 3.24e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.36e-08 | 2 |
mesenchymal cell neoplasm | 9.55e-08 | 2 |