FFCP PHASE1:Hg19::chr3:58200737..58200748,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |||
|TSSclassifier=weak | |||
|UniProt=E9PES0,Q59F48 | |||
|association_with_transcript=104bp_to_ENST00000450710,uc003djq.1_5end | |||
|coexpression_cluster_id=C2310 | |||
|description=CAGE_peak_14_at_DNASE1L3_5end | |||
|id=chr3:58200737..58200748,- | |||
|ontology_enrichment_celltype=CL:0000945!5.83e-21!24;CL:0000826!5.83e-21!24;CL:0000784!2.42e-15!3;CL:0000946!5.05e-12!1;CL:0000786!5.05e-12!1;CL:0000980!5.05e-12!1;CL:0000838!2.53e-09!52;CL:0000451!2.74e-09!10;CL:0000542!3.90e-09!53;CL:0000051!3.90e-09!53;CL:0000840!5.17e-08!5;CL:0001029!5.17e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.03e-17;3!CL:0000840;1.50e-09;5!CL:0000945;2.61e-09;24!CL:0000990;8.61e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.46e-18,3;CL:0000840,1.44e-09,5;CL:0001029,1.44e-09,5;CL:0000945,2.67e-09,24;CL:0000826,2.67e-09,24;CL:0000990,8.37e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:2355!2.93e-12!1;DOID:0060058!2.92e-10!10;DOID:74!9.44e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2355;2.42e-50;1!DOID:74;5.56e-26;2!DOID:0060058;6.99e-21;10!DOID:1287;1.00e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.42e-50,1;DOID:74,5.56e-26,2;DOID:0060058,6.99e-21,10;DOID:1287,1.00e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.32e-32!3;UBERON:0004854!3.32e-32!3;UBERON:0009034!3.32e-32!3;UBERON:0002095!3.32e-32!3;UBERON:0004782!3.32e-32!3;UBERON:0003281!3.32e-32!3;UBERON:0009664!3.32e-32!3;UBERON:0002296!3.32e-32!3;UBERON:0005602!3.32e-32!3;UBERON:0001179!3.32e-32!3;UBERON:0006293!3.32e-32!3;UBERON:0004177!3.47e-14!7;UBERON:0000945!1.74e-12!8;UBERON:0010039!1.74e-12!8;UBERON:0006834!1.47e-11!1;UBERON:0002372!1.81e-11!1;UBERON:0001961!1.81e-11!1;UBERON:0001744!1.81e-11!1;UBERON:0001735!1.81e-11!1;UBERON:0004457!1.68e-08!12;UBERON:0000042!1.68e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.76e-18;3!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.76e-18,3;UBERON:0004854,6.76e-18,3;UBERON:0009034,6.76e-18,3;UBERON:0002095,6.76e-18,3;UBERON:0004782,6.76e-18,3;UBERON:0003281,6.76e-18,3;UBERON:0009664,6.76e-18,3;UBERON:0002296,6.76e-18,3;UBERON:0005602,6.76e-18,3;UBERON:0001179,6.76e-18,3;UBERON:0006293,6.76e-18,3;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.57470412614962,1.10195093839151,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31833993535501,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563903507879121,0.128915775947154,5.1969401080963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p14@DNASE1L3 | |||
}} |
Revision as of 19:25, 21 January 2014
Short description: | p14@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_DNASE1L3_5end |
Coexpression cluster: | C2310_splenic_hereditary_thyroid_B_lymphangiectasia_plasma_throat |
Association with transcript: | 104bp_to_ENST00000450710, uc003djq.1_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | E9PES0Q59F48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.46e-18 | 3 |
immature conventional dendritic cell | 1.44e-09 | 5 |
common dendritic progenitor | 1.44e-09 | 5 |
lymphocyte of B lineage | 2.67e-09 | 24 |
pro-B cell | 2.67e-09 | 24 |
conventional dendritic cell | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.76e-18 | 3 |
gastrointestinal system mesentery | 6.76e-18 | 3 |
stomach region | 6.76e-18 | 3 |
mesentery | 6.76e-18 | 3 |
gastrointestinal system serosa | 6.76e-18 | 3 |
mesentery of stomach | 6.76e-18 | 3 |
gut mesentery | 6.76e-18 | 3 |
dorsal mesentery | 6.76e-18 | 3 |
dorsal mesogastrium | 6.76e-18 | 3 |
peritoneal cavity | 6.76e-18 | 3 |
spleen primordium | 6.76e-18 | 3 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.42e-50 | 1 |
hematopoietic system disease | 5.56e-26 | 2 |
lymphoma | 6.99e-21 | 10 |
cardiovascular system disease | 1.00e-13 | 4 |