FFCP PHASE1:Hg19::chr3:77089684..77089699,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |||
|TSSclassifier=weak | |||
|UniProt=F8W703,F8WBR3 | |||
|association_with_transcript=-181bp_to_ENST00000332191,ENST00000473767_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_30_at_ROBO2_5end | |||
|id=chr3:77089684..77089699,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.07e-35!86;UBERON:0001017!5.65e-34!82;UBERON:0001049!3.85e-33!57;UBERON:0005068!3.85e-33!57;UBERON:0006241!3.85e-33!57;UBERON:0007135!3.85e-33!57;UBERON:0000073!4.22e-31!94;UBERON:0001016!4.22e-31!94;UBERON:0002020!9.43e-30!34;UBERON:0003528!9.43e-30!34;UBERON:0000955!7.12e-29!69;UBERON:0006238!7.12e-29!69;UBERON:0002346!3.01e-28!90;UBERON:0002616!7.12e-26!59;UBERON:0003075!6.67e-25!86;UBERON:0007284!6.67e-25!86;UBERON:0002780!1.37e-24!41;UBERON:0001890!1.37e-24!41;UBERON:0006240!1.37e-24!41;UBERON:0003080!6.25e-24!42;UBERON:0002791!2.53e-23!33;UBERON:0001893!1.44e-22!34;UBERON:0001869!1.09e-20!32;UBERON:0003056!4.09e-20!61;UBERON:0000924!1.84e-18!173;UBERON:0006601!1.84e-18!173;UBERON:0002619!4.30e-18!22;UBERON:0002308!1.00e-17!9;UBERON:0000125!1.00e-17!9;UBERON:0000153!1.03e-17!129;UBERON:0007811!1.03e-17!129;UBERON:0001950!3.32e-16!20;UBERON:0004121!3.95e-16!169;UBERON:0000956!8.72e-16!25;UBERON:0000203!8.72e-16!25;UBERON:0000033!1.21e-15!123;UBERON:0006331!3.50e-14!3;UBERON:0007023!6.52e-14!115;UBERON:0001905!3.94e-11!2;UBERON:0002757!3.94e-11!2;UBERON:0010134!3.94e-11!2;UBERON:0002784!3.94e-11!2;UBERON:0005408!3.94e-11!2;UBERON:0001899!3.94e-11!2;UBERON:0009663!1.06e-10!7;UBERON:0003076!2.93e-10!15;UBERON:0003057!2.93e-10!15;UBERON:0002148!5.58e-10!2;UBERON:0009662!5.58e-10!2;UBERON:0002298!4.18e-09!8;UBERON:0000025!5.15e-09!194;UBERON:0001872!6.00e-09!5;UBERON:0002420!2.44e-08!9;UBERON:0007245!2.44e-08!9;UBERON:0010009!2.44e-08!9;UBERON:0010011!2.44e-08!9;UBERON:0000454!2.44e-08!9;UBERON:0000475!6.99e-08!365;UBERON:0000483!2.00e-07!309;UBERON:0000064!2.69e-07!219;UBERON:0000119!2.72e-07!312;UBERON:0002240!3.77e-07!3;UBERON:0000988!6.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0002780;3.40e-07;41!UBERON:0001890;3.40e-07;41!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0002780,2.59e-09,41;UBERON:0001890,2.59e-09,41;UBERON:0003080,2.59e-09,41;UBERON:0006240,2.59e-09,41;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0001049,4.68e-07,56;UBERON:0005068,4.68e-07,56;UBERON:0006241,4.68e-07,56;UBERON:0007135,4.68e-07,56;UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0,6.42842203053944,15.8053349442847,0,0,0,0,0,0,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.571812353413251,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0.219881033490858,0,0,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@ROBO2 | |||
}} |
Revision as of 19:53, 21 January 2014
Short description: | p30@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ROBO2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -181bp_to_ENST00000332191, ENST00000473767_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | F8W703F8WBR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
regional part of forebrain | 2.59e-09 | 41 |
forebrain | 2.59e-09 | 41 |
anterior neural tube | 2.59e-09 | 41 |
future forebrain | 2.59e-09 | 41 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |
temporal lobe | 6.39e-07 | 6 |