FFCP PHASE1:Hg19::chr3:100494130..100494141,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100494130..100494141,- | |||
|id=chr3:100494130..100494141,- | |||
|ontology_enrichment_celltype=CL:0000057!2.27e-09!75;CL:0000569!4.06e-07!4;CL:0000011!4.06e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.18e-31;3!CL:0000388;1.18e-31;3!CL:0000499;3.49e-13;28!CL:0000569;1.55e-11;4!CL:0000153;2.55e-11;9!CL:0000447;2.55e-11;9!CL:0000138;5.08e-08;6!CL:0000327;5.46e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.32e-31,3;CL:0000388,1.32e-31,3;CL:0000499,3.69e-13,28;CL:0000569,1.33e-11,4;CL:0000011,1.33e-11,4;CL:0000153,2.69e-11,9;CL:0000447,2.69e-11,9;CL:0000058,5.36e-08,6;CL:0000138,5.36e-08,6;CL:0000327,5.64e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000011;1.55e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.09e-12;1!DOID:3369;9.60e-12;1!DOID:4235;9.60e-12;1!DOID:3451;9.69e-07;2!DOID:4159;9.69e-07;2!DOID:0060122;9.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.93e-12,1;DOID:3369,8.64e-12,1;DOID:4235,1.32e-11,1;DOID:3451,9.44e-07,2;DOID:4159,9.44e-07,2;DOID:0060122,9.44e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.18e-31;3!UBERON:0000043;1.18e-31;3!UBERON:0007845;1.18e-31;3!UBERON:0002426;9.60e-12;1!UBERON:0003831;9.60e-12;1!UBERON:0003898;9.60e-12;1!UBERON:0004830;9.60e-12;1!UBERON:0003830;9.60e-12;1!UBERON:0005175;9.60e-12;1!UBERON:0001774;9.60e-12;1!UBERON:0001103;9.60e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.32e-31,3;UBERON:0000043,1.32e-31,3;UBERON:0007845,1.32e-31,3;UBERON:0002426,7.76e-12,1;UBERON:0003831,7.76e-12,1;UBERON:0003898,7.76e-12,1;UBERON:0004830,7.76e-12,1;UBERON:0003830,7.76e-12,1;UBERON:0005175,7.76e-12,1;UBERON:0001774,7.76e-12,1;UBERON:0001103,7.76e-12,1;UBERON:0010084,7.76e-12,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,3.0417768981773,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.25326102332916,2.38336525463794,0.573673241497627,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0,0.61246251376468,0,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0.877955241761676,0.612975591598039,0.45071417671979,0,0.89694817844431,0,0,0,0.103052529238439,0,0,0,0,0,0,0.646584227275248,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,1.44781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.841980283299221,0.640695746278505,0,0.321707842287215,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.929691098594572,2.83331112147576,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,4.61012850143863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,3.11039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0.568209015825267,0.50313580350515,0.889811221596536,2.28840068396924,1.66354016139563,0.310874401165561,0.295710299979268,0.318593534327405,0,0,0.414706207840855,0.53168342911599,0,0.300515217994437,0,0.406870733204662,0.363697318405119,0,1.85613503951397,0,0,0,0,0,0,0,0,0,0,0.244736704506468,1.61179956973339,0,0.219284049578707,1.06013487567529,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.443511850813194,0,0.171488009437418,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.8453114551668,1.18948980281472,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,1.11598505450025,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr3:100494130..100494141,- | |||
}} |
Revision as of 20:12, 21 January 2014
Short description: | p@chr3:100494130..100494141, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100494130..100494141, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.32e-31 | 3 |
tendon cell | 1.32e-31 | 3 |
stromal cell | 3.69e-13 | 28 |
cardiac mesenchymal cell | 1.33e-11 | 4 |
migratory trunk neural crest cell | 1.33e-11 | 4 |
GAG secreting cell | 2.69e-11 | 9 |
carbohydrate secreting cell | 2.69e-11 | 9 |
chondroblast | 5.36e-08 | 6 |
chondrocyte | 5.36e-08 | 6 |
extracellular matrix secreting cell | 5.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.32e-31 | 3 |
tendon | 1.32e-31 | 3 |
regular connective tissue | 1.32e-31 | 3 |
chest muscle | 7.76e-12 | 1 |
respiratory system muscle | 7.76e-12 | 1 |
skeletal muscle of trunk | 7.76e-12 | 1 |
respiratory system skeletal muscle | 7.76e-12 | 1 |
thoracic segment muscle | 7.76e-12 | 1 |
chest organ | 7.76e-12 | 1 |
muscle of trunk | 7.76e-12 | 1 |
diaphragm | 7.76e-12 | 1 |
future diaphragm | 7.76e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.93e-12 | 1 |
peripheral primitive neuroectodermal tumor | 8.64e-12 | 1 |
spindle cell sarcoma | 1.32e-11 | 1 |
skin carcinoma | 9.44e-07 | 2 |
skin cancer | 9.44e-07 | 2 |
integumentary system cancer | 9.44e-07 | 2 |