FFCP PHASE1:Hg19::chr3:112335269..112335281,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2713 | |||
|description=CAGE_peak_at_chr3:112335269..112335281,- | |||
|id=chr3:112335269..112335281,- | |||
|ontology_enrichment_celltype=CL:0000055!2.53e-11!180;CL:0000057!2.49e-10!75;CL:0002620!1.25e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.62e-11;4!CL:0002547;1.62e-11;4!CL:0002620;7.84e-09;23!CL:0002579;2.82e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.72e-11,4;CL:0002547,1.72e-11,4;CL:0000057,4.41e-10,76;CL:0002620,6.68e-09,23;CL:0002579,4.27e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.00e-08;5!DOID:450;3.00e-08;5!DOID:66;3.00e-08;5!DOID:423;3.00e-08;5!DOID:0080000;3.00e-08;5!DOID:11722;3.00e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.93e-08,5;DOID:450,2.93e-08,5;DOID:66,2.93e-08,5;DOID:423,2.93e-08,5;DOID:0080000,2.93e-08,5;DOID:11722,2.93e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.62e-11;4!UBERON:0000415;1.62e-11;4!UBERON:0007240;1.62e-11;4!UBERON:0005742;1.62e-11;4!UBERON:0005734;1.62e-11;4!UBERON:0004664;1.62e-11;4!UBERON:0004663;1.62e-11;4!UBERON:0003688;8.84e-07;6!UBERON:0002358;8.84e-07;6!UBERON:0003684;8.84e-07;6!UBERON:0001178;8.84e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.72e-11,4;UBERON:0007240,1.72e-11,4;UBERON:0005742,1.72e-11,4;UBERON:0005734,1.72e-11,4;UBERON:0004664,1.72e-11,4;UBERON:0004663,1.72e-11,4;UBERON:0004797,1.06e-09,7;UBERON:0003688,8.27e-07,6;UBERON:0002358,8.27e-07,6;UBERON:0003684,8.27e-07,6;UBERON:0001178,8.27e-07,6 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.83240725324762,0,0.893922188854576,0.872338524100369,0,0,0.783556884599516,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.492484232307152,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,1.0843174571537,1.00267582127178,0.579386075843295,0,0.486634870302636,0.189069634328136,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,1.98788780678127,2.27934920996244,7.54732330635347,28.3968254541326,4.61068896857864,1.68203280042692,0,0.24666754841716,4.04574346019696,0.134710672069688,0.326923806226917,0,0,0,0,0,0.149448680551801,0.704606991862589,0.647491777472526,0.280901613404497,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,8.9694817844431,2.34913127700424,0.423863802319124,1.80054657650641,1.13357782162283,2.57640540045629,0.744467425326359,6.41350062516812,0.487185025805993,3.02920529092937,1.47279837827679,1.2931684545505,1.77504796258307,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.904902010304444,0,0.845302752556,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0.977208552881205,0.710783897485092,0,0.301439377059586,0,0.699810938274399,0,0,0,0.239624855491583,0,0,2.60606352001643,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.630809660135739,0.937131319941706,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.604780586659361,0.744323423456331,1.68808170616869,0.841980283299221,2.94720043288112,1.02341449813341,3.53878626515936,0,0.308419387605311,0.887808626565635,0.492762936082855,0.519254429183621,0.116210378459959,0,0,0,0.34444334449382,1.27463817604702,0.655622074797121,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.82509499920588,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.767518373630648,1.10269257987624,0.322260734604821,0.290033387828457,0.511359764496605,0.623224249527161,0,0.192190067365106,0.127612712494584,0.10115778085555,0,4.40737285562896,0,0,0,0,0,0.572499546967965,0.372158369359667,1.2655176988749,1.14378116354295,0,0,0.318203247925937,0,0.539617372749944,2.19629623788844,0.471249609382746,0,0,0,0,0.243713489631284,0,0.409499734223957,1.83827061539827,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0,0.196498082026242,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0.593929361665277,0,0,0,0.890469640183247,0,1.47787785689595,1.9924798825107,0.276283915531148,0,0,0,1.55519793830904,0.898683511473268,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.331737779793674,0,0,0.10893846351899,0.41827123283581,0.769502585037971,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0.282706142867882,0.649165919226273,0,0.176915129006678,0,0,0.247127877893006,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,1.48000651186684,1.04836000945218,1.54787429224455,0,0,0,0.0969890164884194,0,0.225980740780532,0.411125773940253,0,0.0633107959558787,0,0.400794101257669,0.213452994739353,0.599428828746391,0,0.229073192331831,0,0.14405479798815,0.745515213392595,0,0.407712618220842,0.104602846312333,2.44795722327172,0.288950589901519,0,0,0,0.429765441419957,0,2.51354161145029,0.916641696046735,0.717873024576814,0,0,0,0.134366944973453,1.44119953416961,0,0,0,0,0.295282444544246,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,1.5840050477911,0,1.72723677587501,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,1.19730191562487,0,1.02232813071253,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0.638341257770182,1.08803560673895,0.2506898940227,1.22538230705385,0.655745261419609,0,0,0,0.1251909307065,1.14681839138014,0.221858103073705,0,0.276697269872462,0,0.758245587708239,0,0.470531639396343,0,0,0.447764408660622,3.50569964770837,3.32883516901568,0.378806010550178,0.50313580350515,2.66943366478961,0.228840068396924,2.26846385644859,0.466311601748341,0.443565449968902,0.318593534327405,0,0.155262956876259,1.65882483136342,0.265841714557995,0.521745061811734,0.450772826991655,4.18885733385675,0.406870733204662,0.181848659202559,0,2.32016879939247,2.3885753321917,0,1.37358282073117,0.336749488765919,1.26184898228651,0.57785949122191,3.85994864474866,0.260994291965212,1.81364740409818,0.231522474323834,0.244736704506468,0.358177682162975,0.308801447160972,3.0699766941019,1.06013487567529,1.3503982678964,0,0,0,0,0,0,0.132864840313363,0,1.96565909307848,1.47463745252232,0.422624246717254,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0.123935764259002,0,4.13405655849444,0.0788617450012534,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,1.61735932610474,0,0.690359926060101,0.397832444232549,0.601682626794058,1.41193548092464,0,0,0.49131575253029,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0.177404740325278,0.115233987555779,0.685952037749674,0,0,1.06374456795571,0.222462803784138,0.078493092850514,0,0,1.82631744101899,0.215927591218621,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0.473328002922261,0.511280428554946,0.423387050190929,0,0,0,0,0,0,0,0,0,4.37139893753226,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,2.113278637917,1.35941691750254,0,0.128915775947154,0,0.357107877211315,1.41157948686277,0.320965466756673,0.730336388246517,0,0.286679166302903,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0.865253124247578,0.126166424835079,0.109265571963696,0.380095503034311,0.203977659483963,0,0,0.250707539292375,0.0757786982182394,0,0,0.20686599172379,0.639701945702943,0.476128862927481,0,0,1.23345048838675,0.0636471582781649,1.41482032270754,0.653150243690884,0.342233301085281,0.202056159043763,0.143444410785353,3.99192427855216,1.87227517805241,0.426909383510862,0,0.0898252021065869,2.34640942403454,1.58913877437726,1.22068853494722,0,0.603821380773079,0 | |||
|short_description=p@chr3:112335269..112335281,- | |||
}} |
Revision as of 20:31, 21 January 2014
Short description: | p@chr3:112335269..112335281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:112335269..112335281, - |
Coexpression cluster: | C2713_Fibroblast_Smooth_Cardiac_Preadipocyte_uterus_Adipocyte_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.72e-11 | 4 |
fibroblast of the aortic adventitia | 1.72e-11 | 4 |
fibroblast | 4.41e-10 | 76 |
skin fibroblast | 6.68e-09 | 23 |
omentum preadipocyte | 4.27e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.72e-11 | 4 |
tunica adventitia of artery | 1.72e-11 | 4 |
adventitia | 1.72e-11 | 4 |
tunica adventitia of blood vessel | 1.72e-11 | 4 |
aorta tunica adventitia | 1.72e-11 | 4 |
aorta wall | 1.72e-11 | 4 |
blood vessel layer | 1.06e-09 | 7 |
omentum | 8.27e-07 | 6 |
peritoneum | 8.27e-07 | 6 |
abdominal cavity | 8.27e-07 | 6 |
visceral peritoneum | 8.27e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.93e-08 | 5 |
myotonic disease | 2.93e-08 | 5 |
muscle tissue disease | 2.93e-08 | 5 |
myopathy | 2.93e-08 | 5 |
muscular disease | 2.93e-08 | 5 |
myotonic dystrophy | 2.93e-08 | 5 |