FFCP PHASE1:Hg19::chr3:129158696..129158703,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8930 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6919 | |||
|TSSclassifier=strong | |||
|UniProt=Q2MD36 | |||
|association_with_transcript=-20bp_to_ENST00000393278_5end | |||
|description=CAGE_peak_4_at_MBD4_5end | |||
|id=chr3:129158696..129158703,- | |||
|ontology_enrichment_celltype=CL:0000766!8.70e-18!76;CL:0000557!1.11e-15!71;CL:0000763!1.39e-15!112;CL:0000049!1.39e-15!112;CL:0000738!1.99e-15!140;CL:0002009!3.66e-15!65;CL:0000839!1.03e-14!70;CL:0002194!1.45e-14!63;CL:0000576!1.45e-14!63;CL:0000040!1.45e-14!63;CL:0000559!1.45e-14!63;CL:0002032!3.09e-14!165;CL:0000837!3.09e-14!165;CL:0000037!8.27e-14!172;CL:0000566!8.27e-14!172;CL:0000988!4.55e-13!182;CL:0002031!4.92e-13!124;CL:0002057!2.77e-12!42;CL:0000860!4.33e-12!45;CL:0002087!4.81e-12!119;CL:0002320!1.62e-11!365;CL:0000134!1.82e-11!358;CL:0000219!6.73e-11!390;CL:0000034!3.93e-10!444;CL:0000723!1.26e-09!436;CL:0000048!2.24e-09!430;CL:0000012!3.34e-07!682;CL:0000548!8.43e-07!679;CL:0000004!8.43e-07!679;CL:0000255!8.43e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.70e-10;8!CL:0000081;3.62e-09;11!CL:0000473;3.94e-09;39!CL:0000234;3.94e-09;39!CL:0000860;6.80e-08;33!CL:0002057;6.80e-08;33!CL:0000766;8.13e-08;69!CL:0000775;1.19e-07;3!CL:0000576;2.34e-07;48!CL:0000623;4.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.87e-17,72;CL:0000988,1.28e-14,177;CL:0002032,2.23e-14,161;CL:0000837,2.23e-14,161;CL:0000738,4.24e-14,136;CL:0000763,1.32e-13,108;CL:0000049,1.32e-13,108;CL:0000037,2.80e-13,168;CL:0000473,5.82e-13,48;CL:0000234,5.82e-13,48;CL:0000839,4.39e-12,66;CL:0000557,4.84e-12,67;CL:0002031,9.01e-12,120;CL:0002194,1.21e-11,59;CL:0000576,1.21e-11,59;CL:0000040,1.21e-11,59;CL:0000559,1.21e-11,59;CL:0002009,4.51e-11,61;CL:0002087,8.01e-11,115;CL:0000860,8.93e-11,42;CL:0002057,8.93e-11,42;CL:0000094,3.88e-10,8;CL:0000081,1.70e-09,11;CL:0000134,2.37e-09,354;CL:0002320,7.32e-09,361;CL:0000775,7.18e-08,3;CL:0000219,1.28e-07,386;CL:0000034,1.44e-07,441;CL:0000048,2.24e-07,427;CL:0000623,4.01e-07,3;CL:0000825,4.01e-07,3;CL:0000723,4.77e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.03e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.75e-14!80;UBERON:0002390!1.94e-13!102;UBERON:0003061!1.94e-13!102;UBERON:0001474!5.66e-13!86;UBERON:0002384!6.45e-12!375;UBERON:0002193!8.48e-11!112;UBERON:0004765!3.23e-10!101;UBERON:0001434!3.23e-10!101;UBERON:0002405!2.59e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.58e-13,76;UBERON:0002390,1.53e-12,98;UBERON:0003061,1.53e-12,98;UBERON:0001474,1.12e-11,82;UBERON:0002193,1.29e-10,108;UBERON:0004765,5.21e-10,90;UBERON:0002405,1.83e-09,93;UBERON:0002384,1.09e-08,371;UBERON:0001434,2.52e-08,100 | |||
|phase1_expression=0.726713517082227,0.428201047781966,1.40954404095971,1.0007329835313,0,0.872338524100369,5.06599756336621,0,0,0,0,0.436882744260345,0,0.37129905888014,0.662794751455832,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0.410623275218653,0,0.152826811495903,0.492603536699674,0.157421562627358,0.393364276848904,2.30297638858328,0.309632246632152,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,1.10799081706375,1.20326668482085,0.651032612147555,0.223915474239924,0,0.77272670290256,0.872389432677388,1.13362783106643,1.21292030593908,0.697287110717054,0.411167888021826,1.54853185447552,0,0.768482119587302,0.709446689665756,1.37898272294647,1.29096936716765,1.35426486594342,0.941211697713023,1.36453075028923,1.12361742222542,0.918251677112708,0.962787081228281,1.27867425159808,0,0.598390972864896,0.852449501065388,0.580418477257168,0.56738522469114,0,2.26123798731069,1.0429658368404,0.868755378820466,1.21079900526674,0.736555271975129,1.26584954976354,1.05627643155971,0.637812899895131,1.67726916406701,0.898629049171961,0.750884464207532,1.28580469357664,0.285012743741249,0,0.547992461293902,0,0,0.889509253863555,1.28019066769952,0.800791974072025,0,0.661044872784862,1.90810750907073,0,0.587237189370939,1.14681968437569,1.32171328579026,0,1.31692042387539,0.196709770113833,0.393010762749165,1.23360899399706,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0.164437904603676,0.552700035571697,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.403213486449465,1.06976078313403,0.868946423296794,4.87613732627923,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,2.3858578411533,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,0,0.370784442784429,0.649094787309367,0.870648686496336,0.664789802594326,0.476981248610684,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0,0.633152558322899,1.05927344650575,0.286836620748814,0,1.12135520028461,0,0,0.311211035399766,0.538842688278752,0.490385709340376,0,0,0.234321431833797,0.312160076830321,1.1409436430889,0.448346041655403,0.117434498643765,0.161872944368132,0,0.408308342509787,0.122834317311768,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0,0.250237039743928,0.554128230968366,0,0,0.45071417671979,0.113432183160021,0.717558542755448,0.213557388818567,0,0.600182192168805,0.618315175430633,1.03056216018252,0.37223371266318,0.337552664482532,0.974370051611986,0.757301322732344,0.460249493211497,0.323292113637624,0.710019185033229,0.10075209822764,0.169560592310488,0.386521706326594,0.272746120590835,0,0.487894824518382,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0.72995471815166,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,2.53510069643662,0,0,0.882926198829301,0.245976877086227,0,0.768251997860379,0,0.201057944823262,0.370353780634118,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0.738651018262192,1.40402559083543,0.297262324577456,0,0,0.425325291727159,0.358234090811393,1.16253575405585,0,3.94130590316755,0.176096868026452,0.207328115540772,0.432359860250884,0.25248486685276,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0.112131084345361,0,0.36669142910475,1.29271715757778,0,0,0.531876233169741,0,0,1.41849132023278,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,6.32501818449095,0.239624855491583,0,1.42636905040718,0.579125226670317,0.821905290201534,0.895304816199478,0.672510863961164,2.1673383622212,1.07813787429759,1.92514554419623,0,1.30139853857622,0.773288812777695,0.167516265334349,0,1.49801404789436,8.97484377612075,3.72973962092432,0.49076596687656,0.500170521059677,0.271265023699736,0.207970861530807,0,0.315404830067869,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0,0.173767228936166,0,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0.248107807818777,1.99500565274481,1.68396056659844,0.640695746278505,0.511707249066704,0.321707842287215,0,0.308419387605311,0.355123450626254,0.492762936082855,0.519254429183621,1.16210378459959,0.120859449591622,0,0.0920809889358963,0.34444334449382,0.728364672026868,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,1.0457418040996,0,0.328014645699706,0,0.618246069886334,0,0.082509499920588,0,0.650060246036521,1.6068392984416,0.676695028044854,0.308097234229289,0.767518373630648,0.275673144969061,0.644521469209642,0.580066775656914,0.59658639191270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| |||
|short_description=p4@MBD4 | |||
}} |
Revision as of 21:18, 21 January 2014
Short description: | p4@MBD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MBD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000393278_5end |
EntrezGene: | MBD4 |
HGNC: | 6919 |
UniProt: | Q2MD36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.58e-13 | 76 |
hematopoietic system | 1.53e-12 | 98 |
blood island | 1.53e-12 | 98 |
bone element | 1.12e-11 | 82 |
hemolymphoid system | 1.29e-10 | 108 |
skeletal element | 5.21e-10 | 90 |
immune system | 1.83e-09 | 93 |
connective tissue | 1.09e-08 | 371 |
skeletal system | 2.52e-08 | 100 |