FFCP PHASE1:Hg19::chr4:1873216..1873238,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12766 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000514045_5end | |||
|description=CAGE_peak_5_at_WHSC1_5end | |||
|id=chr4:1873216..1873238,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.63e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.24e-10;25!CL:0000333;6.22e-08;5!CL:0002321;1.10e-07;15!CL:0000095;5.22e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.55e-11,59;CL:0002319,3.15e-10,25;CL:0000333,2.46e-09,41;CL:0000221,1.32e-08,72;CL:0000095,5.73e-07,17;CL:0000123,5.73e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.68e-08!239;DOID:162!4.08e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.83e-11!94;UBERON:0001016!4.83e-11!94;UBERON:0001017!9.71e-09!82;UBERON:0005743!1.41e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.22e-08;5!UBERON:0002410;6.22e-08;5!UBERON:0000010;2.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.14e-08,5;UBERON:0002410,4.14e-08,5;UBERON:0000010,1.54e-07,8;UBERON:0001016,2.61e-07,89 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0.982935746006035,0,0.655324116390517,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,1.47745269692145,0.408001382488506,1.25381888591235,2.57612388417951,0.821246550437305,2.25976751270645,0.382067028739756,0.410502947249729,0.472264687882075,0,0,0,0,0,0,1.00707360754392,0.568676929949686,0,0,0,0,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,1.31692042387539,0.196709770113833,0,0,0.167186495390678,0,0.946895611469467,0,1.00269411196656,0.883817722424512,0.664601683750863,0,0,0.650296737799391,0.493313713811028,0.552700035571697,0,0,0,0,0.566546713487831,0.383220493601921,0,0,0.637130828648193,0,0,0,0.127986611154418,1.24930726552346,0,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0.12786256184353,2.53007406669196,0.50133791063589,0.289693037921647,1.5905718941022,0,1.41802225746102,0.221729397462564,1.40535657109002,1.37528029272598,0,0,0,0,0,1.19245312152671,0,2.60020250930695,0.993812036833525,1.72046919021225,0,0.56530794192401,0,0.275118041940067,1.25396979922086,0,0.71153252537342,0.33472061276467,0,0,0.976248230192678,0.367663080345869,0,0.892997282840798,0.44905874525234,0.675668882899933,0,0,0.916008719652036,0,0,0,0.496971951695318,0.759783069987479,0.529636723252875,0.286836620748814,0.709336764396714,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.490385709340376,0.302714855289863,1.15235184896,0.468642863667593,0.312160076830321,0,0.149448680551801,0.469737994575059,0.647491777472526,0.842704840213491,0.408308342509787,0.737005903870608,0,0,0.247266929278557,0,0,0.505008341862199,0.625592599359821,0.277064115484183,1.31693286264251,0.612975591598039,1.05166641234618,0.567160915800105,1.4351170855109,0.427114777637135,0.635795703478686,2.70081986475962,0.92747276314595,1.03056216018252,0.37223371266318,2.19409231913646,1.07180705677318,0.504867548488229,0.368199594569197,0,1.77504796258307,1.30977727695932,1.52604533079439,0,0.272746120590835,0,0.609868530647977,1.72288698817931,1.51052125730374,1.55491582523056,1.00928340350251,1.09493207722749,0,1.28648187638577,0,0,0,0.828147600278907,1.34867752062481,0.482022059766964,1.10293972732394,0.653638332277218,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0.491953754172454,0.171567810298526,0.329250856225877,2.24803506515239,0.402115889646523,0.370353780634118,1.95484983186195,0,0,1.04337364477569,0.117408694235822,0.433099343283221,0.462985512576611,0.380508304469197,0,1.71697232418975,0,0,0.891786973732369,0,0,0.141775097242386,0.53735113621709,0.871901815541886,0.766765358330422,1.47798971368783,0.968532774145487,0,0.144119953416961,0.12624243342638,0.190493682876507,0,0,0,0,0.300343057843917,0,1.12131084345361,0.87192013766656,1.0267360014933,0.129271715757778,0,0,0,0,1.02882949704857,1.41849132023278,1.3321108950805,0.428933980974443,0,0,0.325736184293735,0,0,0,0,0.399891964728228,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.579125226670317,0.821905290201534,0.895304816199478,0.224170287987055,0.788123040807709,0.431255149719035,0.256686072559497,2.7950408664471,2.60279707715243,2.31986643833309,1.67516265334349,1.27587750330633,0,0,0,0.24538298343828,0,0.813795071099207,0.207970861530807,0.535286966391485,0,0.468565659970853,0.902838299183157,0,1.03473071292505,1.32845119707087,0.553107505625109,0.695068915744663,0.391602314925481,0.686286847621712,0.206768026122887,0.215714200818617,0.640365346820666,0.606255142892519,1.66435439510497,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0.308419387605311,0.355123450626254,1.23190734020714,0,0.581051892299796,0.966875596732978,0.200506470303285,0.276242966807689,0.68888668898764,1.0925470080403,0,0.902399225814824,0.770153371044148,0,2.92278449306521,0.844413031143006,0,0.340187410553031,0.215915916102139,0,1.08378575017541,0.501689773854853,0.764628819135115,0.831076008928724,0.671624264166535,0.219259876645935,0.261435451024901,0.512900250232778,0,0.325378394664303,0.309123034943167,1.28197250745681,1.40266149865,0,0,0,0.48335359146061,0.308097234229289,0.15350367472613,0.827019434907183,0.429680979473094,0.580066775656914,1.10794615640931,0.890320356467374,0.330569830721956,0.384380134730212,0.510450849978337,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,1.27948895655667,0,0.95460974377781,0,0,0,0.589062011728432,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0.818999468447914,0,1.13008116620243,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,1.00387946542836,0.294747123039363,0.7133421029625,0.709522128141196,0,0.329294892959902,1.13841952129715,0.699869440489966,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.6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| |||
|short_description=p5@WHSC1 | |||
}} |
Revision as of 23:50, 21 January 2014
Short description: | p5@WHSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WHSC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000514045_5end |
EntrezGene: | WHSC1 |
HGNC: | 12766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.55e-11 | 59 |
neural cell | 3.15e-10 | 25 |
migratory neural crest cell | 2.46e-09 | 41 |
ectodermal cell | 1.32e-08 | 72 |
neuron associated cell | 5.73e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.73e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.14e-08 | 5 |
autonomic nervous system | 4.14e-08 | 5 |
peripheral nervous system | 1.54e-07 | 8 |
nervous system | 2.61e-07 | 89 |