FFCP PHASE1:Hg19::chr4:22694628..22694639,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19069 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H227,A8K9N1 | |||
|association_with_transcript=80bp_to_ENST00000503442,NM_001128432,NM_020973,uc003gqp.3,uc010iep.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_GBA3_5end | |||
|id=chr4:22694628..22694639,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.98e-07!12;CL:0000417!2.98e-07!12;CL:0000668!2.98e-07!12;CL:0000414!2.98e-07!12;CL:0000412!2.98e-07!12;CL:0000182!2.98e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.71e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.85e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.87e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.38e-11!19;UBERON:0006925!1.38e-11!19;UBERON:0008836!1.38e-11!19;UBERON:0000160!8.04e-11!27;UBERON:0008835!5.53e-10!22;UBERON:0003894!5.53e-10!22;UBERON:0001301!8.99e-10!1;UBERON:0002336!9.82e-10!1;UBERON:0001018!9.82e-10!1;UBERON:0002473!9.82e-10!1;UBERON:0005340!9.82e-10!1;UBERON:0002316!9.82e-10!1;UBERON:0003544!9.82e-10!1;UBERON:0001020!9.82e-10!1;UBERON:0005970!9.82e-10!1;UBERON:0002437!9.82e-10!1;UBERON:0009854!1.53e-09!23;UBERON:0005172!3.51e-09!55;UBERON:0005173!3.51e-09!55;UBERON:0007499!9.18e-09!25;UBERON:0009497!9.18e-09!25;UBERON:0000015!9.18e-09!25;UBERON:0002423!9.18e-09!25;UBERON:0006235!9.18e-09!25;UBERON:0004161!9.18e-09!25;UBERON:0005057!2.03e-08!26;UBERON:0009856!2.03e-08!26;UBERON:0005409!2.60e-08!35;UBERON:0002417!3.55e-08!61;UBERON:0000916!3.55e-08!61;UBERON:0002365!4.99e-07!31;UBERON:0002330!4.99e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-15;19!UBERON:0006925;1.36e-15;19!UBERON:0002108;2.25e-15;4!UBERON:0002423;6.12e-12;25!UBERON:0000160;1.19e-09;17!UBERON:0002365;1.31e-09;31!UBERON:0002330;1.31e-09;31!UBERON:0002368;3.86e-08;33!UBERON:0005409;1.12e-07;22!UBERON:0001007;4.02e-07;81!UBERON:0005172;6.32e-07;52!UBERON:0005173;6.32e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.50e-15,19;UBERON:0006925,1.50e-15,19;UBERON:0008836,1.50e-15,19;UBERON:0002108,2.34e-15,4;UBERON:0008835,1.75e-13,22;UBERON:0003894,1.75e-13,22;UBERON:0009854,6.50e-13,23;UBERON:0007499,6.57e-12,25;UBERON:0009497,6.57e-12,25;UBERON:0000015,6.57e-12,25;UBERON:0002423,6.57e-12,25;UBERON:0006235,6.57e-12,25;UBERON:0004161,6.57e-12,25;UBERON:0009856,1.83e-11,26;UBERON:0002365,1.15e-09,31;UBERON:0002330,1.15e-09,31;UBERON:0000160,1.21e-09,17;UBERON:0002368,1.35e-08,35;UBERON:0005172,1.99e-08,54;UBERON:0005173,1.99e-08,54;UBERON:0002417,1.38e-07,60;UBERON:0000916,1.38e-07,60;UBERON:0004921,4.39e-07,118;UBERON:0005409,7.56e-07,25;UBERON:0000949,9.63e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,0.982827216677626,5.31710916013264,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74277184738353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81253126788156,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,5.47936522566407,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@GBA3 | |||
}} |
Revision as of 00:28, 22 January 2014
Short description: | p6@GBA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GBA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 80bp_to_ENST00000503442, NM_001128432, NM_020973, uc003gqp.3, uc010iep.2_5end |
EntrezGene: | GBA3 |
HGNC: | 19069 |
UniProt: | Q9H227A8K9N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.85e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.50e-15 | 19 |
digestive gland | 1.50e-15 | 19 |
liver bud | 1.50e-15 | 19 |
small intestine | 2.34e-15 | 4 |
hepatic diverticulum | 1.75e-13 | 22 |
liver primordium | 1.75e-13 | 22 |
digestive tract diverticulum | 6.50e-13 | 23 |
epithelial sac | 6.57e-12 | 25 |
epithelium of foregut-midgut junction | 6.57e-12 | 25 |
anatomical boundary | 6.57e-12 | 25 |
hepatobiliary system | 6.57e-12 | 25 |
foregut-midgut junction | 6.57e-12 | 25 |
septum transversum | 6.57e-12 | 25 |
sac | 1.83e-11 | 26 |
exocrine gland | 1.15e-09 | 31 |
exocrine system | 1.15e-09 | 31 |
intestine | 1.21e-09 | 17 |
endocrine gland | 1.35e-08 | 35 |
abdomen element | 1.99e-08 | 54 |
abdominal segment element | 1.99e-08 | 54 |
abdominal segment of trunk | 1.38e-07 | 60 |
abdomen | 1.38e-07 | 60 |
subdivision of digestive tract | 4.39e-07 | 118 |
gastrointestinal system | 7.56e-07 | 25 |
endocrine system | 9.63e-07 | 45 |