FFCP PHASE1:Hg19::chr4:89680105..89680115,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=201bp_to_ENST00000515155_5end | |||
|description=CAGE_peak_35_at_FAM13A_5end | |||
|id=chr4:89680105..89680115,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.34e-08,6;CL:0000031,6.34e-08,6;CL:0000404,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.31e-14;3!CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.68e-65!22;UBERON:0001950!1.67e-62!20;UBERON:0000956!4.23e-57!25;UBERON:0000203!4.23e-57!25;UBERON:0001869!2.21e-56!32;UBERON:0001049!6.32e-56!57;UBERON:0005068!6.32e-56!57;UBERON:0006241!6.32e-56!57;UBERON:0007135!6.32e-56!57;UBERON:0005743!4.24e-53!86;UBERON:0001893!6.00e-53!34;UBERON:0001017!6.23e-52!82;UBERON:0002616!3.05e-49!59;UBERON:0002780!1.27e-48!41;UBERON:0001890!1.27e-48!41;UBERON:0006240!1.27e-48!41;UBERON:0002791!1.72e-48!33;UBERON:0000073!1.10e-47!94;UBERON:0001016!1.10e-47!94;UBERON:0003080!2.12e-47!42;UBERON:0002020!5.25e-47!34;UBERON:0003528!5.25e-47!34;UBERON:0003075!6.68e-46!86;UBERON:0007284!6.68e-46!86;UBERON:0000955!1.02e-44!69;UBERON:0006238!1.02e-44!69;UBERON:0002346!1.17e-43!90;UBERON:0003056!3.37e-35!61;UBERON:0007023!2.39e-30!115;UBERON:0000033!7.74e-28!123;UBERON:0004121!1.37e-26!169;UBERON:0000153!2.49e-26!129;UBERON:0007811!2.49e-26!129;UBERON:0000924!7.35e-26!173;UBERON:0006601!7.35e-26!173;UBERON:0000200!1.26e-25!6;UBERON:0002021!3.45e-20!5;UBERON:0001872!4.87e-20!5;UBERON:0002771!3.12e-19!3;UBERON:0001871!4.50e-19!7;UBERON:0000025!1.25e-14!194;UBERON:0000064!3.83e-11!219;UBERON:0004111!8.21e-11!241;UBERON:0000483!4.71e-10!309;UBERON:0003076!4.87e-10!15;UBERON:0003057!4.87e-10!15;UBERON:0000119!6.63e-10!312;UBERON:0000477!2.91e-09!286;UBERON:0001896!7.60e-09!3;UBERON:0005290!7.60e-09!3;UBERON:0010096!7.60e-09!3;UBERON:0004733!2.50e-08!12;UBERON:0002028!2.50e-08!12;UBERON:0007277!2.50e-08!12;UBERON:0004732!1.08e-07!13;UBERON:0002902!1.25e-07!1;UBERON:0009899!1.25e-07!1;UBERON:0000475!1.28e-07!365;UBERON:0007190!1.42e-07!1;UBERON:0002022!1.72e-07!1;UBERON:0002581!1.95e-07!1;UBERON:0002146!2.35e-07!1;UBERON:0005623!2.35e-07!1;UBERON:0001882!3.01e-07!1;UBERON:0005403!3.01e-07!1;UBERON:0003112!3.40e-07!1;UBERON:0000032!3.40e-07!1;UBERON:0005253!3.40e-07!1;UBERON:0003128!3.40e-07!1;UBERON:0002241!3.40e-07!1;UBERON:0001703!3.40e-07!1;UBERON:0004761!3.40e-07!1;UBERON:0009617!3.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;2.63e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0001950;1.39e-08;20!UBERON:0002037;5.73e-08;6!UBERON:0002619;6.40e-08;22!UBERON:0000956;4.08e-07;25!UBERON:0000203;4.08e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.74e-09,5;UBERON:0002021,3.22e-09,5;UBERON:0001950,1.42e-08,20;UBERON:0001017,2.54e-08,81;UBERON:0002037,5.54e-08,6;UBERON:0006215,5.54e-08,6;UBERON:0002619,6.52e-08,22;UBERON:0001016,1.45e-07,89;UBERON:0000073,2.03e-07,53;UBERON:0002616,2.03e-07,53;UBERON:0000956,4.15e-07,25;UBERON:0000203,4.15e-07,25;UBERON:0001049,4.58e-07,56;UBERON:0005068,4.58e-07,56;UBERON:0006241,4.58e-07,56;UBERON:0007135,4.58e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.615349092722265,1.26035848110859,0.553258019713743,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.443910671357348,2.18789923607288,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p35@FAM13A | |||
}} |
Revision as of 02:14, 22 January 2014
Short description: | p35@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_FAM13A_5end |
Coexpression cluster: | NA |
Association with transcript: | 201bp_to_ENST00000515155_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.34e-08 | 6 |
neuroblast | 6.34e-08 | 6 |
electrically signaling cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.74e-09 | 5 |
occipital lobe | 3.22e-09 | 5 |
neocortex | 1.42e-08 | 20 |
central nervous system | 2.54e-08 | 81 |
cerebellum | 5.54e-08 | 6 |
rhombic lip | 5.54e-08 | 6 |
regional part of cerebral cortex | 6.52e-08 | 22 |
nervous system | 1.45e-07 | 89 |
regional part of nervous system | 2.03e-07 | 53 |
regional part of brain | 2.03e-07 | 53 |
cerebral cortex | 4.15e-07 | 25 |
pallium | 4.15e-07 | 25 |
neural tube | 4.58e-07 | 56 |
neural rod | 4.58e-07 | 56 |
future spinal cord | 4.58e-07 | 56 |
neural keel | 4.58e-07 | 56 |