FFCP PHASE1:Hg19::chr4:109090344..109090354,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UJU2,Q659G9 | |||
|association_with_transcript=-232bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |||
|description=CAGE_peak_38_at_LEF1_5end | |||
|id=chr4:109090344..109090354,- | |||
|ontology_enrichment_celltype=CL:0000084!3.91e-11!25;CL:0000827!3.91e-11!25;CL:0000791!9.79e-08!18;CL:0000789!9.79e-08!18;CL:0002420!9.79e-08!18;CL:0002419!9.79e-08!18;CL:0000790!9.79e-08!18;CL:0002253!1.56e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000817;4.44e-18;1!CL:0002253;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.02e-09,2;CL:0000817,6.14e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.36e-08!4;UBERON:0005058!1.36e-08!4;UBERON:0009113!1.36e-08!4;UBERON:0003295!1.36e-08!4;UBERON:0005562!1.36e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.58e-34;2!UBERON:0005058;2.58e-34;2!UBERON:0009113;2.58e-34;2!UBERON:0004177;2.25e-14;5!UBERON:0005057;2.25e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0003351,3.85e-12,6;UBERON:0004177,1.53e-10,7;UBERON:0005057,1.53e-10,7;UBERON:0000974,1.20e-07,10;UBERON:0003408,1.20e-07,10;UBERON:0001042,1.20e-07,10;UBERON:0009145,1.20e-07,10;UBERON:0006562,5.00e-07,11;UBERON:0009722,5.00e-07,11;UBERON:0007690,5.00e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0.444859689486181,0.535081656179426,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59684583357601,1.84968792705877,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,2.04386596391473,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73495839002757,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0,0,0,0,2.38740930193642,0,3.27543637912984,0,0.905777061400041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,1.52038201213724,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,2.19602293442421,2.48298857183432,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p38@LEF1 | |||
}} |
Revision as of 02:41, 22 January 2014
Short description: | p38@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -232bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.02e-09 | 2 |
precursor B cell | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
pharyngeal epithelium | 3.85e-12 | 6 |
hemopoietic organ | 1.53e-10 | 7 |
immune organ | 1.53e-10 | 7 |
neck | 1.20e-07 | 10 |
gland of gut | 1.20e-07 | 10 |
chordate pharynx | 1.20e-07 | 10 |
pharyngeal region of foregut | 1.20e-07 | 10 |
pharynx | 5.00e-07 | 11 |
entire pharyngeal arch endoderm | 5.00e-07 | 11 |
early pharyngeal endoderm | 5.00e-07 | 11 |