FFCP PHASE1:Hg19::chr4:110434870..110434880,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr4:110434870..110434880,+ | |||
|id=chr4:110434870..110434880,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;5.12e-50;1!CL:0002372;5.12e-50;1!CL:0000182;1.64e-17;12!CL:0000056;1.21e-13;4!CL:0000737;1.21e-13;4!CL:0000680;2.26e-08;7!CL:0000188;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.99e-50,1;CL:0002372,3.99e-50,1;CL:0000182,1.71e-17,12;CL:0000737,1.13e-13,4;CL:0000515,1.13e-13,4;CL:0000188,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;1.21e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.84e-24;19!UBERON:0006925;2.84e-24;19!UBERON:0002423;1.05e-18;25!UBERON:0002365;9.35e-16;31!UBERON:0002330;9.35e-16;31!UBERON:0002368;4.98e-12;33!UBERON:0000949;2.05e-10;43!UBERON:0005172;1.91e-08;52!UBERON:0005173;1.91e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.96e-24,19;UBERON:0006925,2.96e-24,19;UBERON:0008836,2.96e-24,19;UBERON:0008835,4.27e-21,22;UBERON:0003894,4.27e-21,22;UBERON:0009854,3.18e-20,23;UBERON:0007499,1.09e-18,25;UBERON:0009497,1.09e-18,25;UBERON:0000015,1.09e-18,25;UBERON:0002423,1.09e-18,25;UBERON:0006235,1.09e-18,25;UBERON:0004161,1.09e-18,25;UBERON:0009856,5.19e-18,26;UBERON:0002365,2.87e-15,31;UBERON:0002330,2.87e-15,31;UBERON:0002368,1.23e-13,35;UBERON:0000949,8.21e-11,45;UBERON:0003929,3.71e-09,54;UBERON:0005172,3.71e-09,54;UBERON:0005173,3.71e-09,54;UBERON:0002530,1.88e-08,59;UBERON:0002417,2.51e-08,60;UBERON:0000916,2.51e-08,60;UBERON:0005256,2.56e-07,122 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15519381447946,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0.381382095467167,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:110434870..110434880,+ | |||
}} |
Revision as of 02:42, 22 January 2014
Short description: | p@chr4:110434870..110434880, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:110434870..110434880, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.99e-50 | 1 |
myotube | 3.99e-50 | 1 |
hepatocyte | 1.71e-17 | 12 |
striated muscle cell | 1.13e-13 | 4 |
skeletal muscle myoblast | 1.13e-13 | 4 |
cell of skeletal muscle | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
liver | 2.96e-24 | 19 |
digestive gland | 2.96e-24 | 19 |
liver bud | 2.96e-24 | 19 |
hepatic diverticulum | 4.27e-21 | 22 |
liver primordium | 4.27e-21 | 22 |
digestive tract diverticulum | 3.18e-20 | 23 |
epithelial sac | 1.09e-18 | 25 |
epithelium of foregut-midgut junction | 1.09e-18 | 25 |
anatomical boundary | 1.09e-18 | 25 |
hepatobiliary system | 1.09e-18 | 25 |
foregut-midgut junction | 1.09e-18 | 25 |
septum transversum | 1.09e-18 | 25 |
sac | 5.19e-18 | 26 |
exocrine gland | 2.87e-15 | 31 |
exocrine system | 2.87e-15 | 31 |
endocrine gland | 1.23e-13 | 35 |
endocrine system | 8.21e-11 | 45 |
gut epithelium | 3.71e-09 | 54 |
abdomen element | 3.71e-09 | 54 |
abdominal segment element | 3.71e-09 | 54 |
gland | 1.88e-08 | 59 |
abdominal segment of trunk | 2.51e-08 | 60 |
abdomen | 2.51e-08 | 60 |
trunk mesenchyme | 2.56e-07 | 122 |