FFCP PHASE1:Hg19::chr4:156775910..156775941,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11708 | |||
|TSSclassifier=strong | |||
|UniProt=D6RA50,D6RB68 | |||
|association_with_transcript=0bp_to_ENST00000506072,ENST00000507590_5end | |||
|description=CAGE_peak_2_at_TDO2_5end | |||
|id=chr4:156775910..156775941,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.29e-20!41;UBERON:0001890!2.29e-20!41;UBERON:0006240!2.29e-20!41;UBERON:0003080!1.60e-19!42;UBERON:0001893!2.11e-19!34;UBERON:0001869!8.51e-19!32;UBERON:0002791!1.43e-18!33;UBERON:0002020!9.25e-18!34;UBERON:0003528!9.25e-18!34;UBERON:0005743!1.17e-17!86;UBERON:0000955!1.52e-17!69;UBERON:0006238!1.52e-17!69;UBERON:0003056!1.86e-17!61;UBERON:0001017!4.06e-17!82;UBERON:0001049!1.06e-16!57;UBERON:0005068!1.06e-16!57;UBERON:0006241!1.06e-16!57;UBERON:0007135!1.06e-16!57;UBERON:0000073!1.16e-16!94;UBERON:0001016!1.16e-16!94;UBERON:0002616!1.12e-15!59;UBERON:0000956!1.15e-15!25;UBERON:0000203!1.15e-15!25;UBERON:0002619!1.25e-15!22;UBERON:0003075!2.13e-14!86;UBERON:0007284!2.13e-14!86;UBERON:0002346!3.22e-14!90;UBERON:0001950!3.33e-14!20;UBERON:0000033!5.84e-13!123;UBERON:0000153!8.85e-12!129;UBERON:0007811!8.85e-12!129;UBERON:0000475!3.77e-09!365;UBERON:0000924!2.19e-08!173;UBERON:0006601!2.19e-08!173;UBERON:0004121!2.53e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.88e-21;22!UBERON:0000956;2.18e-20;25!UBERON:0000203;2.18e-20;25!UBERON:0001950;1.10e-18;20!UBERON:0001869;2.64e-18;32!UBERON:0001893;1.09e-16;34!UBERON:0002791;3.70e-16;32!UBERON:0003528;3.57e-15;34!UBERON:0002020;3.57e-15;34!UBERON:0002780;7.52e-14;41!UBERON:0001890;7.52e-14;41!UBERON:0000200;4.72e-11;6!UBERON:0000073;4.77e-09;53!UBERON:0002616;4.77e-09;53!UBERON:0000955;3.07e-08;68!UBERON:0001017;4.45e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.16e-21,22;UBERON:0001869,8.79e-21,32;UBERON:0000956,1.02e-20,25;UBERON:0000203,1.02e-20,25;UBERON:0002780,7.80e-20,41;UBERON:0001890,7.80e-20,41;UBERON:0003080,7.80e-20,41;UBERON:0006240,7.80e-20,41;UBERON:0001893,3.40e-19,34;UBERON:0001950,5.15e-19,20;UBERON:0002791,1.35e-18,32;UBERON:0001016,9.39e-18,89;UBERON:0001017,2.90e-17,81;UBERON:0003528,3.68e-17,34;UBERON:0002020,3.68e-17,34;UBERON:0000955,4.13e-17,68;UBERON:0006238,4.13e-17,68;UBERON:0003056,1.16e-16,61;UBERON:0001049,4.96e-15,56;UBERON:0005068,4.96e-15,56;UBERON:0006241,4.96e-15,56;UBERON:0007135,4.96e-15,56;UBERON:0000073,5.20e-15,53;UBERON:0002616,5.20e-15,53;UBERON:0003075,4.33e-12,82;UBERON:0007284,4.33e-12,82;UBERON:0000200,2.70e-11,6;UBERON:0002346,3.95e-11,86;UBERON:0011216,7.22e-09,223;UBERON:0004121,1.49e-08,171;UBERON:0000924,1.49e-08,171;UBERON:0006601,1.49e-08,171;UBERON:0010371,8.49e-08,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,0.684372125364421,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,1.11957737119962,1.29557466407592,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,1.5905718941022,0.486634870302636,0.945348171640679,1.33037638477538,0.702678285545008,0.327447688744282,0,0,0,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,2.38336525463794,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0.877955241761676,0,1.05166641234618,0,1.07633781413317,1.49490172172997,0.635795703478686,0,0.309157587715317,1.28820270022815,1.11670113798954,0.506328996723799,0.292311015483596,1.51460264546469,1.01254888506529,0.484938170456436,3.19508633264953,0.906768884048762,0.339121184620975,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,3.80265104465493,2.94848165003288,2.36315962672562,0,0.860919069801795,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.34779121492523,1.17408694235822,0,0,0,0,0.858486162094873,1.47730203652438,0.234004265139238,0.445893486866185,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,4.31960861178188,1.30139853857622,0,0.670065061337395,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0.315404830067869,0.117141414992713,1.20378439891088,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,2.04682899626681,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0,0,0.459257792658427,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0.656029291399411,0,1.23649213977267,6.13515414282901,6.93079799332939,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0.127612712494584,0,0.464845549297286,2.51849877464512,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0.949138274156178,1.5250415513906,0.511795582622668,1.28381696410176,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,0,0,0.424216295861138,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,1.47024129588619,0,0,0,0,0,0,0,0,3.93116049358842,0.912938716132769,0,0,0,0,0.605399121573143,3.40676990152261,0,0,0,0,2.9308214310306,0.556812347790485,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0.23874448473769,0.593929361665277,0.307160702099232,4.97073823883149,0.844016498463076,0.779160935160341,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,2.22273980289274,0.969332746095218,2.78304294485554,0,0,0,0,15.1345286219715,0,0.236387681767936,0,0,0,0.885741385813839,0.482385754501632,0,0,0,1.31631238292384,0.762569244632931,0,0,1.70913083770502,1.38338342632836,0.0897576444097721,0,0,0,0,0,0.784901281975124,0,0,0,0,0,7.15214605411704,1.26598838716816,0,0,0.432777279484182,0,0,0,0,0,0,0.269604531922708,0,1.1713222286267,0,1.9566461893209,2.91336455440911,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0,0,0,4.83836228250648,0.138674673013139,0,0.587954384486266,0,0.17472666824203,2.23581842213102,1.06431964417994,1.46178634172371,0.903270027585302,0,0,0,0.685209623233754,2.78200456384186,5.12817447242618,0,3.68730573157055,0.426905989478705,1.39866726707491,0,0,0,0,0.124252535565433,0,8.96967760085853,6.38077362505233,9.58783245781425,3.17845648891671,1.20084057741958,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,9.74432066996013,0,10.3379859675209,1.0896272488926,0,0,0,0,0,3.82722206945555,0,0.0788057072991982,0,0.105600336519406,8.06793026997802,0,0,0,0,0,0,0,0,0.246277562248017,7.15629691498771,1.13312091520126,1.02586563574658,1.32506888912221,0.387848869084652,0,3.93499727133958,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,6.91038023501031,10.6328181596038,10.9823638411767,2.6290095448365,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0.467426619694449,0,1.32582103692562,0.251567901752575,0.889811221596536,1.60188047877847,0.453692771289717,0.15543720058278,1.62640664988597,0.63718706865481,2.24901556081802,0.155262956876259,0.414706207840855,0.797525143673985,0,0.450772826991655,0,0,0.181848659202559,0,0.464033759878494,0,0.800055529326307,1.37358282073117,0.336749488765919,3.7855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| |||
|short_description=p2@TDO2 | |||
}} |
Revision as of 03:39, 22 January 2014
Short description: | p2@TDO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TDO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506072, ENST00000507590_5end |
EntrezGene: | TDO2 |
HGNC: | 11708 |
UniProt: | D6RA50D6RB68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.16e-21 | 22 |
cerebral hemisphere | 8.79e-21 | 32 |
cerebral cortex | 1.02e-20 | 25 |
pallium | 1.02e-20 | 25 |
regional part of forebrain | 7.80e-20 | 41 |
forebrain | 7.80e-20 | 41 |
anterior neural tube | 7.80e-20 | 41 |
future forebrain | 7.80e-20 | 41 |
telencephalon | 3.40e-19 | 34 |
neocortex | 5.15e-19 | 20 |
regional part of telencephalon | 1.35e-18 | 32 |
nervous system | 9.39e-18 | 89 |
central nervous system | 2.90e-17 | 81 |
brain grey matter | 3.68e-17 | 34 |
gray matter | 3.68e-17 | 34 |
brain | 4.13e-17 | 68 |
future brain | 4.13e-17 | 68 |
pre-chordal neural plate | 1.16e-16 | 61 |
neural tube | 4.96e-15 | 56 |
neural rod | 4.96e-15 | 56 |
future spinal cord | 4.96e-15 | 56 |
neural keel | 4.96e-15 | 56 |
regional part of nervous system | 5.20e-15 | 53 |
regional part of brain | 5.20e-15 | 53 |
neural plate | 4.33e-12 | 82 |
presumptive neural plate | 4.33e-12 | 82 |
gyrus | 2.70e-11 | 6 |
neurectoderm | 3.95e-11 | 86 |
organ system subdivision | 7.22e-09 | 223 |
ectoderm-derived structure | 1.49e-08 | 171 |
ectoderm | 1.49e-08 | 171 |
presumptive ectoderm | 1.49e-08 | 171 |
ecto-epithelium | 8.49e-08 | 104 |