FFCP PHASE1:Hg19::chr4:185747114..185747128,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2180 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3569 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPM6 | |||
|association_with_transcript=59bp_to_ENST00000507295_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ACSL1_5end | |||
|id=chr4:185747114..185747128,- | |||
|ontology_enrichment_celltype=CL:0000766!1.11e-24!76;CL:0002057!1.99e-24!42;CL:0000738!4.85e-24!140;CL:0000557!1.32e-20!71;CL:0000860!3.07e-20!45;CL:0002009!3.51e-20!65;CL:0002194!8.74e-20!63;CL:0000576!8.74e-20!63;CL:0000040!8.74e-20!63;CL:0000559!8.74e-20!63;CL:0000839!3.30e-19!70;CL:0002087!9.00e-19!119;CL:0002031!4.46e-18!124;CL:0000037!9.11e-15!172;CL:0000566!9.11e-15!172;CL:0000988!2.70e-14!182;CL:0002032!2.18e-13!165;CL:0000837!2.18e-13!165;CL:0000763!2.10e-12!112;CL:0000049!2.10e-12!112;CL:0002320!1.11e-08!365;CL:0000134!4.11e-08!358;CL:0000136!6.49e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-19;33!CL:0002057;1.70e-19;33!CL:0000473;2.98e-18;39!CL:0000234;2.98e-18;39!CL:0000576;1.45e-15;48!CL:0000766;5.37e-13;69!CL:0000136;3.45e-08;13!CL:0002087;9.59e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.58e-30,72;CL:0000738,6.77e-28,136;CL:0000473,3.39e-27,48;CL:0000234,3.39e-27,48;CL:0000557,2.39e-25,67;CL:0002009,4.11e-25,61;CL:0000860,5.09e-25,42;CL:0002057,5.09e-25,42;CL:0002194,9.61e-25,59;CL:0000576,9.61e-25,59;CL:0000040,9.61e-25,59;CL:0000559,9.61e-25,59;CL:0000839,9.26e-24,66;CL:0002087,1.72e-22,115;CL:0002031,1.26e-21,120;CL:0000988,3.20e-17,177;CL:0000037,3.26e-17,168;CL:0002032,7.52e-16,161;CL:0000837,7.52e-16,161;CL:0000763,6.62e-15,108;CL:0000049,6.62e-15,108;CL:0002320,4.67e-09,361;CL:0000134,1.82e-08,354;CL:0000136,4.71e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-26!115;UBERON:0002390!4.78e-26!102;UBERON:0003061!4.78e-26!102;UBERON:0002193!1.26e-22!112;UBERON:0002371!1.50e-17!80;UBERON:0001474!8.43e-17!86;UBERON:0002405!8.53e-17!115;UBERON:0004765!3.51e-12!101;UBERON:0001434!3.51e-12!101;UBERON:0000479!1.17e-11!787;UBERON:0003081!8.05e-11!216;UBERON:0002204!4.15e-09!167;UBERON:0000178!5.21e-09!15;UBERON:0000179!5.21e-09!15;UBERON:0000463!5.21e-09!15;UBERON:0002384!2.33e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-09;15!UBERON:0000179;2.98e-09;15!UBERON:0000463;2.98e-09;15!UBERON:0007023;3.08e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-30,98;UBERON:0003061,1.41e-30,98;UBERON:0007023,9.45e-27,114;UBERON:0002193,2.40e-26,108;UBERON:0002371,1.69e-21,76;UBERON:0001474,2.43e-20,82;UBERON:0004765,5.12e-19,90;UBERON:0002405,5.24e-19,93;UBERON:0001434,3.05e-15,100;UBERON:0000479,1.01e-14,773;UBERON:0003081,2.32e-13,203;UBERON:0002204,7.05e-11,167;UBERON:0000178,3.34e-09,15;UBERON:0000179,3.34e-09,15;UBERON:0000463,3.34e-09,15;UBERON:0000926,3.44e-09,315;UBERON:0004120,3.44e-09,315;UBERON:0006603,3.44e-09,315;UBERON:0002384,1.12e-07,371 | |||
|phase1_expression=37.4257461297347,278.116580534387,64.2752082677628,50.0366491765652,104.141935001558,5.23403114460221,283.695863548508,83.3870232923417,300.885843686214,0,0,5.67947567538448,4.74780560811216,7.67351388352289,7.95353701746998,21.5144046864568,1.80808358407193,0.730310090387373,0.487932798790507,0.738726348460727,0,0.940364164434263,0.286235987131057,0.684372125364421,0.502170558379211,8.71112825526644,10.2625736812432,10.7833770399741,107.7818118566,97.1088377185948,124.781795392757,0,0.30120591877825,0.369754010166788,1.70427841276664,5.11809236954717,2.93600439334847,849.8289566879,698.295766091033,529.506524546678,19.4806462588734,46.3167942407141,34.515126062981,58.3046937506054,73.307933075629,61.1311834193297,382.810623783663,234.776864060463,244.048620265342,517.558613787549,363.748203271323,420.228922512016,709.141865275224,396.973080404053,343.983275949628,142.499451033752,82.6905634675273,140.227454293733,782.044345007656,622.281383500546,595.862201244706,255.304906344518,226.191787742931,202.882981253562,1306.81220154451,1028.10202714035,1050.07831180654,320.090799537091,203.899821102299,278.001721222549,1066.71392364,1225.62797256662,1264.58370021377,30.4207612289196,49.1115932919251,52.6243200226023,111.54233072847,81.9965834914624,109.936301300803,17.1007646244749,12.7306673407418,13.5171473785829,0,4.91524750135918,1.77901850772711,6.40095333849761,2.40237592221607,5.74752439954483,3.96626923670917,0,23.9069447025968,69.2939883457708,33.6400440750201,47.5816782884493,252.789361904673,3.423993102076,4.52432471261816,5.50215067848831,6.99045096598331,0.167186495390678,1.95553359980154,1.4203434172042,0,0.334231370655521,1.47302953737419,0.443067789167242,0.541607727530031,0.128091319725675,0,0.657751618414705,0.552700035571697,0.289803085735052,1.03800594213442,0.535081656179426,0,0.339928028092699,3.06576394881537,1.03088233644789,0.759059076058509,2.86708872891687,0,0,3.01150238155546,0.895906278080929,9.99445812418767,4.97232229292435,2.46338399076314,15.7253259715291,18.7208137048455,11.2963035028583,2.43806866313962,5.36560687762909,2.55725123687061,2.53007406669196,1.00267582127178,1.01392563272577,4.7717156823066,0.486634870302636,0.378139268656271,0.443458794925128,0.790513071238134,32.9412374876747,0.364295288292542,0,12.9818957461873,14.4527681958392,14.6253756570752,55.3298248388393,25.1677760743256,38.6315801382748,1.39133685156694,1.72046919021225,0.694281003215189,1.13061588384802,1.67799774483962,0.550236083880135,1.04497483268405,1.03366703667732,0.71153252537342,1.67360306382335,0.805658634218294,0,0,1.10298924103761,0.81014194788176,0.267899184852239,0,0.337834441449967,0,0,2.38162267109529,1519.42821303781,3835.14681242694,0.436094052142534,0.993943903390637,1.01304409331664,3.04541115870403,7.74458876021797,4.965357350777,1.68203280042692,2.1349799145941,0.74000264525148,3.11211035399766,2.82892411346345,1.14423332179421,2.27036141467397,4.03323147135999,0.234321431833797,0.624320153660641,1.1409436430889,1.34503812496621,0.352303495931295,0.647491777472526,0.280901613404497,1.22492502752936,0.859840221182376,2.37649296704261,5.94001428641027,3.70900393917835,2.73048408581408,1.43723628363248,0.505008341862199,0.125118519871964,1.10825646193673,1.75591048352335,1.22595118319608,3.45547535485173,1.13432183160021,2.33206526395521,0.640672166455702,1.69545520927649,1.20036438433761,1.64884046781502,2.57640540045629,0.930584281657949,2.19409231913646,1.65642908774038,2.77677151668526,1.56484827691909,0.646584227275248,1.77504796258307,1.61203357164224,2.20428770003634,0.193260853163297,0,1.72082757233402,0.121973706129595,0,0.232387885739037,0.621966330092223,0,0,7.8224766164908,0.643240938192885,1.38134921352481,19.9678209053751,24.5439023767659,0.236613600079688,0.337169380156203,0,0.330881918197182,0.217879444092406,0.237270619111097,1.07865046528132,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,377.730003769056,163.149317968486,664.047855109898,0.882926198829301,14.6356241866305,2.57351715447788,0.98775256867763,0,0.402115889646523,0.185176890317059,3.58389135841357,1.03993478527958,2.88662684050547,0.695582429850461,2.7003999674239,0.433099343283221,0.462985512576611,0.190254152234598,0,0,15.2654543774186,103.195880926404,40.1304138179566,0,0.335964256397719,0.567100388969546,1.34337784054272,0.871901815541886,0.383382679165211,215.293834960527,3.78608266256872,3.93923419527467,5.33243827642757,2.14612136824846,5.07983154337352,10.3136874900735,15.2382681373061,37.6359381249951,4.8328921570562,6.60754727256618,2.00078502841405,1.12131084345361,7.41132117016576,1.3200891447771,3.23179289394444,60.80159579482,4.22651376278,3.45719551560332,3.12022310734098,1.28603687131071,1.41849132023278,0.799266537048298,11.4382394926518,36.3556475612267,7.40916303102692,0.65147236858747,13.1495021034742,13.4631818398683,2.1100756394171,3.48613383440118,1.69954085009497,25.54099393465,21.5970549315814,33.7334303172851,1.4377491329495,0,0,7.38384664004654,2.67119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| |||
|short_description=p1@ACSL1 | |||
}} |
Revision as of 04:15, 22 January 2014
Short description: | p1@ACSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACSL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 59bp_to_ENST00000507295_5end |
EntrezGene: | ACSL1 |
HGNC: | 3569 |
UniProt: | E7EPM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.58e-30 | 72 |
leukocyte | 6.77e-28 | 136 |
defensive cell | 3.39e-27 | 48 |
phagocyte | 3.39e-27 | 48 |
granulocyte monocyte progenitor cell | 2.39e-25 | 67 |
macrophage dendritic cell progenitor | 4.11e-25 | 61 |
classical monocyte | 5.09e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.09e-25 | 42 |
monopoietic cell | 9.61e-25 | 59 |
monocyte | 9.61e-25 | 59 |
monoblast | 9.61e-25 | 59 |
promonocyte | 9.61e-25 | 59 |
myeloid lineage restricted progenitor cell | 9.26e-24 | 66 |
nongranular leukocyte | 1.72e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-21 | 120 |
hematopoietic cell | 3.20e-17 | 177 |
hematopoietic stem cell | 3.26e-17 | 168 |
hematopoietic oligopotent progenitor cell | 7.52e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.52e-16 | 161 |
myeloid cell | 6.62e-15 | 108 |
common myeloid progenitor | 6.62e-15 | 108 |
connective tissue cell | 4.67e-09 | 361 |
mesenchymal cell | 1.82e-08 | 354 |
fat cell | 4.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-30 | 98 |
blood island | 1.41e-30 | 98 |
adult organism | 9.45e-27 | 114 |
hemolymphoid system | 2.40e-26 | 108 |
bone marrow | 1.69e-21 | 76 |
bone element | 2.43e-20 | 82 |
skeletal element | 5.12e-19 | 90 |
immune system | 5.24e-19 | 93 |
skeletal system | 3.05e-15 | 100 |
tissue | 1.01e-14 | 773 |
lateral plate mesoderm | 2.32e-13 | 203 |
musculoskeletal system | 7.05e-11 | 167 |
blood | 3.34e-09 | 15 |
haemolymphatic fluid | 3.34e-09 | 15 |
organism substance | 3.34e-09 | 15 |
mesoderm | 3.44e-09 | 315 |
mesoderm-derived structure | 3.44e-09 | 315 |
presumptive mesoderm | 3.44e-09 | 315 |
connective tissue | 1.12e-07 | 371 |