FFCP PHASE1:Hg19::chr5:71403280..71403312,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6836 | |||
|TSSclassifier=strong | |||
|UniProt=D6RA32,D6RCL2 | |||
|association_with_transcript=0bp_to_ENST00000504183,ENST00000511641,ENST00000513526_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_MAP1B_5end | |||
|id=chr5:71403280..71403312,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.36e-27!180;CL:0000057!2.24e-13!75;CL:0000680!1.36e-11!57;CL:0000056!1.36e-11!57;CL:0000355!1.36e-11!57;CL:0000393!1.39e-11!60;CL:0000211!1.39e-11!60;CL:0000187!6.30e-11!54;CL:0000222!9.30e-11!119;CL:0000183!7.41e-10!59;CL:0000359!9.06e-10!32;CL:0000192!1.24e-08!42;CL:0000514!1.24e-08!42;CL:0002321!9.44e-07!248;CL:0000220!9.78e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.41e-09;32!CL:0000192;7.00e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.19e-14,76;CL:0000680,5.61e-12,58;CL:0000056,5.61e-12,58;CL:0000355,5.61e-12,58;CL:0000393,5.77e-12,61;CL:0000211,5.77e-12,61;CL:0000187,2.64e-11,55;CL:0000222,4.27e-11,121;CL:0000359,7.96e-10,32;CL:0000192,5.49e-09,43;CL:0000514,5.49e-09,43 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.17e-08;82!CL:0000514;7.00e-07;43!CL:0000355;9.79e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-36!94;UBERON:0001016!1.10e-36!94;UBERON:0001017!6.81e-36!82;UBERON:0005743!1.71e-35!86;UBERON:0000475!3.75e-34!365;UBERON:0000955!1.41e-31!69;UBERON:0006238!1.41e-31!69;UBERON:0001049!8.68e-30!57;UBERON:0005068!8.68e-30!57;UBERON:0006241!8.68e-30!57;UBERON:0007135!8.68e-30!57;UBERON:0000025!2.43e-29!194;UBERON:0003075!8.67e-29!86;UBERON:0007284!8.67e-29!86;UBERON:0002616!5.70e-28!59;UBERON:0000119!1.53e-27!312;UBERON:0004121!1.60e-27!169;UBERON:0000483!1.74e-27!309;UBERON:0002346!1.78e-26!90;UBERON:0004111!2.84e-26!241;UBERON:0000924!3.94e-26!173;UBERON:0006601!3.94e-26!173;UBERON:0000033!5.83e-25!123;UBERON:0000477!3.35e-24!286;UBERON:0002780!7.59e-24!41;UBERON:0001890!7.59e-24!41;UBERON:0006240!7.59e-24!41;UBERON:0003080!9.94e-24!42;UBERON:0000153!2.77e-22!129;UBERON:0007811!2.77e-22!129;UBERON:0003056!1.49e-21!61;UBERON:0002020!5.00e-21!34;UBERON:0003528!5.00e-21!34;UBERON:0001893!5.57e-21!34;UBERON:0002791!2.67e-20!33;UBERON:0001869!3.92e-20!32;UBERON:0000468!2.96e-19!659;UBERON:0000481!1.23e-18!347;UBERON:0000956!3.01e-16!25;UBERON:0000203!3.01e-16!25;UBERON:0000467!3.66e-16!625;UBERON:0000480!7.74e-16!626;UBERON:0007023!4.57e-15!115;UBERON:0002619!7.95e-15!22;UBERON:0001950!1.35e-13!20;UBERON:0000914!8.65e-13!83;UBERON:0002329!8.65e-13!83;UBERON:0003077!8.65e-13!83;UBERON:0003059!8.65e-13!83;UBERON:0007282!8.65e-13!83;UBERON:0009618!8.65e-13!83;UBERON:0007285!8.65e-13!83;UBERON:0004872!9.68e-13!84;UBERON:0002049!2.98e-12!79;UBERON:0007798!2.98e-12!79;UBERON:0000922!3.78e-12!612;UBERON:0002050!1.87e-11!605;UBERON:0005423!1.87e-11!605;UBERON:0001981!2.09e-11!60;UBERON:0007500!2.09e-11!60;UBERON:0004537!2.09e-11!60;UBERON:0006965!2.09e-11!60;UBERON:0000923!2.19e-11!604;UBERON:0005291!2.19e-11!604;UBERON:0006598!2.19e-11!604;UBERON:0002532!2.19e-11!604;UBERON:0004290!5.46e-11!70;UBERON:0002385!7.96e-11!63;UBERON:0001015!7.96e-11!63;UBERON:0000383!7.96e-11!63;UBERON:0001134!1.15e-10!61;UBERON:0002036!1.15e-10!61;UBERON:0003082!1.15e-10!61;UBERON:0001637!1.18e-10!42;UBERON:0003509!1.18e-10!42;UBERON:0004572!1.18e-10!42;UBERON:0000064!1.73e-10!219;UBERON:0000055!1.96e-10!69;UBERON:0004573!2.67e-09!33;UBERON:0004571!2.67e-09!33;UBERON:0001009!4.14e-09!113;UBERON:0004535!4.76e-09!110;UBERON:0000486!5.76e-09!82;UBERON:0005256!2.54e-08!143;UBERON:0002100!3.81e-08!216;UBERON:0003914!7.04e-08!118;UBERON:0003076!2.79e-07!15;UBERON:0003057!2.79e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.19e-18;32!UBERON:0001893;2.28e-18;34!UBERON:0003528;2.34e-18;34!UBERON:0002020;2.34e-18;34!UBERON:0002791;4.11e-18;32!UBERON:0002780;3.44e-17;41!UBERON:0001890;3.44e-17;41!UBERON:0000073;1.92e-16;53!UBERON:0002616;1.92e-16;53!UBERON:0000956;2.41e-16;25!UBERON:0000203;2.41e-16;25!UBERON:0002619;6.49e-15;22!UBERON:0000955;8.40e-15;68!UBERON:0001017;2.33e-14;75!UBERON:0001950;1.13e-13;20!UBERON:0001016;2.71e-13;83!UBERON:0004573;1.10e-08;33!UBERON:0004571;1.10e-08;33!UBERON:0001637;5.35e-08;42!UBERON:0003509;5.35e-08;42!UBERON:0004572;5.35e-08;42!UBERON:0010314;4.20e-07;132!UBERON:0000947;9.79e-07;21!UBERON:0010191;9.79e-07;21 | |||
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| |||
|short_description=p1@MAP1B | |||
}} |
Revision as of 05:49, 22 January 2014
Short description: | p1@MAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP1B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000504183, ENST00000511641, ENST00000513526_5end |
EntrezGene: | MAP1B |
HGNC: | 6836 |
UniProt: | D6RA32D6RCL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.19e-14 | 76 |
muscle precursor cell | 5.61e-12 | 58 |
myoblast | 5.61e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.61e-12 | 58 |
electrically responsive cell | 5.77e-12 | 61 |
electrically active cell | 5.77e-12 | 61 |
muscle cell | 2.64e-11 | 55 |
mesodermal cell | 4.27e-11 | 121 |
vascular associated smooth muscle cell | 7.96e-10 | 32 |
smooth muscle cell | 5.49e-09 | 43 |
smooth muscle myoblast | 5.49e-09 | 43 |