FFCP PHASE1:Hg19::chr5:180688105..180688162,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19024 | |||
|TSSclassifier=strong | |||
|UniProt=Q96A61 | |||
|association_with_transcript=0bp_to_ENST00000327767,NM_032765,uc003mnp.2_5end | |||
|coexpression_cluster_id=C1743 | |||
|description=CAGE_peak_1_at_TRIM52_5end | |||
|id=chr5:180688105..180688162,- | |||
|ontology_enrichment_celltype=CL:0000838!6.08e-08!52;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53;CL:0000791!2.01e-07!18;CL:0000789!2.01e-07!18;CL:0002420!2.01e-07!18;CL:0002419!2.01e-07!18;CL:0000790!2.01e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.87e-07;18!CL:0000789;1.87e-07;18!CL:0002419;1.87e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.04e-08,52;CL:0000542,1.05e-07,53;CL:0000051,1.05e-07,53;CL:0000791,2.00e-07,18;CL:0000789,2.00e-07,18;CL:0002420,2.00e-07,18;CL:0002419,2.00e-07,18;CL:0000790,2.00e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.87e-09;82!CL:0000790;1.87e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-40!115;UBERON:0001049!1.09e-23!57;UBERON:0005068!1.09e-23!57;UBERON:0006241!1.09e-23!57;UBERON:0007135!1.09e-23!57;UBERON:0000955!2.44e-21!69;UBERON:0006238!2.44e-21!69;UBERON:0001017!9.01e-21!82;UBERON:0002616!1.15e-20!59;UBERON:0000073!5.54e-20!94;UBERON:0001016!5.54e-20!94;UBERON:0005743!1.55e-19!86;UBERON:0003080!2.69e-19!42;UBERON:0002780!6.08e-19!41;UBERON:0001890!6.08e-19!41;UBERON:0006240!6.08e-19!41;UBERON:0002020!2.20e-15!34;UBERON:0003528!2.20e-15!34;UBERON:0001893!5.48e-15!34;UBERON:0002791!1.05e-14!33;UBERON:0001869!6.28e-14!32;UBERON:0003075!1.03e-13!86;UBERON:0007284!1.03e-13!86;UBERON:0002346!1.61e-13!90;UBERON:0002619!8.35e-12!22;UBERON:0001950!7.55e-11!20;UBERON:0000153!9.80e-11!129;UBERON:0007811!9.80e-11!129;UBERON:0000956!1.03e-10!25;UBERON:0000203!1.03e-10!25;UBERON:0003056!1.39e-09!61;UBERON:0000033!2.51e-09!123;UBERON:0000924!4.05e-07!173;UBERON:0006601!4.05e-07!173;UBERON:0004121!4.54e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.42e-14;41!UBERON:0001890;4.42e-14;41!UBERON:0000073;2.66e-13;53!UBERON:0002616;2.66e-13;53!UBERON:0003528;2.98e-13;34!UBERON:0002020;2.98e-13;34!UBERON:0002791;4.43e-13;32!UBERON:0001893;6.24e-13;34!UBERON:0001869;8.92e-13;32!UBERON:0002619;7.07e-12;22!UBERON:0007023;2.03e-11;114!UBERON:0000956;6.89e-11;25!UBERON:0000203;6.89e-11;25!UBERON:0001950;6.95e-11;20!UBERON:0001017;6.06e-10;75!UBERON:0000955;1.16e-09;68!UBERON:0001016;2.45e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.69e-40,114;UBERON:0001049,2.49e-23,56;UBERON:0005068,2.49e-23,56;UBERON:0006241,2.49e-23,56;UBERON:0007135,2.49e-23,56;UBERON:0000073,1.10e-21,53;UBERON:0002616,1.10e-21,53;UBERON:0000955,5.58e-21,68;UBERON:0006238,5.58e-21,68;UBERON:0001016,9.19e-21,89;UBERON:0001017,2.14e-20,81;UBERON:0002780,5.99e-19,41;UBERON:0001890,5.99e-19,41;UBERON:0003080,5.99e-19,41;UBERON:0006240,5.99e-19,41;UBERON:0003528,2.17e-15,34;UBERON:0002020,2.17e-15,34;UBERON:0001893,5.42e-15,34;UBERON:0002791,2.87e-14,32;UBERON:0001869,6.21e-14,32;UBERON:0003075,1.20e-13,82;UBERON:0007284,1.20e-13,82;UBERON:0002346,1.96e-13,86;UBERON:0002619,8.28e-12,22;UBERON:0001950,7.49e-11,20;UBERON:0000956,1.02e-10,25;UBERON:0000203,1.02e-10,25;UBERON:0003056,1.26e-09,61;UBERON:0011216,3.55e-09,223;UBERON:0010371,3.61e-07,104;UBERON:0010314,5.28e-07,132;UBERON:0004121,9.08e-07,171;UBERON:0000924,9.08e-07,171;UBERON:0006601,9.08e-07,171 | |||
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| |||
|short_description=p1@TRIM52 | |||
}} |
Revision as of 09:34, 22 January 2014
Short description: | p1@TRIM52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM52_5end |
Coexpression cluster: | C1743_cerebellum_pituitary_pineal_lung_parietal_occipital_CD4 |
Association with transcript: | 0bp_to_ENST00000327767, NM_032765, uc003mnp.2_5end |
EntrezGene: | TRIM52 |
HGNC: | 19024 |
UniProt: | Q96A61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.04e-08 | 52 |
lymphocyte | 1.05e-07 | 53 |
common lymphoid progenitor | 1.05e-07 | 53 |
mature alpha-beta T cell | 2.00e-07 | 18 |
alpha-beta T cell | 2.00e-07 | 18 |
immature T cell | 2.00e-07 | 18 |
mature T cell | 2.00e-07 | 18 |
immature alpha-beta T cell | 2.00e-07 | 18 |