FFCP PHASE1:Hg19::chr6:31540746..31540753,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4049 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6709 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=41bp_to_uc003nuf.2,uc003nug.2,uc003nuh.2,uc010jsr.2_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_10_at_LTA_5end | |||
|id=chr6:31540746..31540753,+ | |||
|ontology_enrichment_celltype=CL:0000080!1.29e-18!6;CL:0000945!5.34e-08!24;CL:0000826!5.34e-08!24;CL:0000838!9.22e-08!52;CL:0000542!1.31e-07!53;CL:0000051!1.31e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.82e-13!1;DOID:0060061!1.82e-13!1;DOID:8691!1.82e-13!1;DOID:2355!9.73e-13!1;DOID:74!5.28e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.34e-66;1!DOID:0060061;3.34e-66;1!DOID:8691;3.34e-66;1!DOID:0060058;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.39e-66,1;DOID:0060061,2.39e-66,1;DOID:8691,2.39e-66,1;DOID:0060058,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001154!3.76e-13!1;UBERON:0001153!3.76e-13!1;UBERON:0002331!2.07e-11!10;UBERON:0000358!2.07e-11!10;UBERON:0000307!2.07e-11!10;UBERON:0000091!2.07e-11!10;UBERON:0000087!2.07e-11!10;UBERON:0007806!2.07e-11!10;UBERON:0008780!2.07e-11!10;UBERON:0005728!2.07e-11!10;UBERON:0000178!8.86e-08!15;UBERON:0000179!8.86e-08!15;UBERON:0000463!8.86e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.22e-27;10!UBERON:0000178;1.08e-18;15!UBERON:0000179;1.08e-18;15!UBERON:0000463;1.08e-18;15!UBERON:0000478;3.86e-12;24!UBERON:0002390;2.73e-09;32!UBERON:0000922;4.40e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.38e-27,10;UBERON:0000358,2.38e-27,10;UBERON:0000307,2.38e-27,10;UBERON:0000091,2.38e-27,10;UBERON:0000087,2.38e-27,10;UBERON:0007010,2.38e-27,10;UBERON:0007806,2.38e-27,10;UBERON:0008780,2.38e-27,10;UBERON:0005728,2.38e-27,10;UBERON:0000178,1.13e-18,15;UBERON:0000179,1.13e-18,15;UBERON:0000463,1.13e-18,15;UBERON:0000478,3.97e-12,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,2.34771483998355,1.35748534357092,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@LTA | |||
}} |
Revision as of 11:00, 22 January 2014
Short description: | p10@LTA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LTA_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 41bp_to_uc003nuf.2, uc003nug.2, uc003nuh.2, uc010jsr.2_5end |
EntrezGene: | LTA |
HGNC: | 6709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.38e-27 | 10 |
blastocyst | 2.38e-27 | 10 |
blastula | 2.38e-27 | 10 |
bilaminar disc | 2.38e-27 | 10 |
inner cell mass | 2.38e-27 | 10 |
cleaving embryo | 2.38e-27 | 10 |
connecting stalk | 2.38e-27 | 10 |
inner cell mass derived epiblast | 2.38e-27 | 10 |
extraembryonic mesoderm | 2.38e-27 | 10 |
blood | 1.13e-18 | 15 |
haemolymphatic fluid | 1.13e-18 | 15 |
organism substance | 1.13e-18 | 15 |
extraembryonic structure | 3.97e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.39e-66 | 1 |
cutaneous T cell lymphoma | 2.39e-66 | 1 |
mycosis fungoides | 2.39e-66 | 1 |
lymphoma | 6.13e-08 | 10 |