FFCP PHASE1:Hg19::chr6:31548877..31548898,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_AK095821_5end | |||
|coexpression_cluster_id=C1976 | |||
|description=CAGE_peak_2_at_AK095821_5end | |||
|id=chr6:31548877..31548898,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.10e-25!172;CL:0000566!1.10e-25!172;CL:0000988!4.53e-25!182;CL:0002032!5.42e-25!165;CL:0000837!5.42e-25!165;CL:0000738!8.12e-25!140;CL:0002087!8.07e-22!119;CL:0002031!2.11e-20!124;CL:0000542!4.33e-16!53;CL:0000051!4.33e-16!53;CL:0000838!6.27e-16!52;CL:0000084!2.40e-12!25;CL:0000827!2.40e-12!25;CL:0000791!8.86e-12!18;CL:0000789!8.86e-12!18;CL:0002420!8.86e-12!18;CL:0002419!8.86e-12!18;CL:0000790!8.86e-12!18;CL:0000763!1.66e-10!112;CL:0000049!1.66e-10!112;CL:0000766!4.66e-10!76;CL:0002139!1.19e-08!24;CL:0000625!1.67e-08!11;CL:0000557!4.08e-07!71;CL:0000115!4.54e-07!35;CL:0000839!6.31e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.95e-19;18!CL:0000789;3.95e-19;18!CL:0002419;3.95e-19;18!CL:0000625;1.82e-15;11!CL:0000084;1.18e-14;25!CL:0000542;1.90e-10;53!CL:0002139;2.20e-09;24!CL:0000094;1.65e-08;8!CL:0000775;3.38e-07;3!CL:0000115;4.82e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.77e-20,18;CL:0000789,7.77e-20,18;CL:0002420,7.77e-20,18;CL:0002419,7.77e-20,18;CL:0000790,7.77e-20,18;CL:0000838,1.03e-17,52;CL:0000037,1.91e-17,168;CL:0000738,2.40e-17,136;CL:0000542,3.15e-17,53;CL:0000051,3.15e-17,53;CL:0000988,1.22e-16,177;CL:0000625,2.97e-16,11;CL:0002032,3.86e-15,161;CL:0000837,3.86e-15,161;CL:0000084,3.90e-15,25;CL:0000827,3.90e-15,25;CL:0002087,9.46e-13,115;CL:0002031,6.25e-11,120;CL:0002139,2.22e-09,24;CL:0000094,7.83e-09,8;CL:0000115,2.34e-08,36;CL:0000775,3.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.95e-19;18!CL:0000051;1.90e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.90e-13!112;UBERON:0002390!3.24e-11!102;UBERON:0003061!3.24e-11!102;UBERON:0000178!1.65e-07!15;UBERON:0000179!1.65e-07!15;UBERON:0000463!1.65e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-17;15!UBERON:0000179;2.84e-17;15!UBERON:0000463;2.84e-17;15!UBERON:0002193;7.05e-11;42!UBERON:0002390;1.59e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.36e-17,15;UBERON:0000179,1.36e-17,15;UBERON:0000463,1.36e-17,15;UBERON:0002193,4.82e-11,108;UBERON:0002390,5.93e-08,98;UBERON:0003061,5.93e-08,98;UBERON:0004177,6.14e-08,7;UBERON:0005057,6.14e-08,7;UBERON:0002370,5.48e-07,4;UBERON:0005058,5.48e-07,4;UBERON:0009113,5.48e-07,4;UBERON:0003295,5.48e-07,4;UBERON:0005562,5.48e-07,4;UBERON:0004535,7.04e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.136874425072884,0,1.14620108621927,0.738905305049512,0.708397031823113,1.57345710739562,1.91914699048606,0.309632246632152,0,0,0,1.00707360754392,0,0,1.10799081706375,1.60435557976113,0.868043482863407,1.11957737119962,0.647787332037959,0.77272670290256,1.01778767145695,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,1.54853185447552,0,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0.941211697713023,0,0.898893937780338,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0,0.736555271975129,0.316462387440884,0.633765858935825,0.637812899895131,0.209658645508376,0.44931452458598,0.901061357049038,0.64290234678832,0.855038231223746,0.59675003159727,0,0,1.63841583378639,0.889509253863555,0.426730222566507,2.00197993518006,1.72425731986345,3.30522436392431,1.90810750907073,0,1.17447437874188,0.382273228125229,0,0,0,0.590129310341499,1.57204305099666,1.23360899399706,3.34372990781356,1.30368906653436,0.946895611469467,0,2.89667187901451,0.883817722424512,1.55073726208535,2.16643091012012,3.20228299314188,2.34106825607781,4.60426132890293,4.14525026678773,2.60822777161547,2.22429844743091,1.60524496853828,0,0.906474741580529,1.14966148080576,0.68725489096526,1.51811815211702,3.50421955756506,1.95325036156926,2.85135613334512,1.80690142893327,3.83959833463255,2.49861453104692,3.31488152861624,2.46338399076314,0.604820229674197,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0,0.589405839739707,0.364295288292542,0,0.649094787309367,0,0.664789802594326,0.715471872916026,0,0,0.596287222100115,0,1.04142150482278,1.13061588384802,2.93649605346934,1.37559020970034,0.417989933073621,1.29208379584664,0.35576626268671,1.00416183829401,1.61131726843659,0,1.70843440283719,0.735326160691737,0.81014194788176,0.714397826272638,2.69435247151404,1.46394924628319,1.53316637465883,0.949265659568129,0,0,7.75560528296651,0.436094052142534,0,0,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.309157587715317,0.772921620136887,0,0.168776332241266,0,1.00973509697646,0.368199594569197,1.13152239773168,0.355009592516614,0,0.339121184620975,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,2.21446636387394,0,0,1.47008711385542,0,0,0,1.7658523976586,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0.721832238805369,2.31492756288305,2.28304982681518,0,0,0.738651018262192,0.468008530278475,0.297262324577456,0,0.503946384596579,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,2.07328115540772,0.576479813667846,1.13618190083742,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0.336393253036082,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,1.34502172792233,1.57624608161542,0.431255149719035,1.41177339907723,0,0,0,0.167516265334349,0,5.24304916763028,5.9832291840805,3.72973962092432,0,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,1.37257369524342,1.86091223510599,1.50999940573032,1.49418580924822,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,1.13733384070897,0.510281115829547,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0,0.308097234229289,0,0.137836572484531,0.751941714077915,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0.382838137483752,0,0,0,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,6.5968189200182,11.4695581071356,9.1143549947866,6.67048971281809,4.11362273086194,5.83625980073446,7.02040868409549,5.55187623405989,0.106824071127473,1.92495971052672,0,0.371606350251437,0,0.213425530045242,0.797131363644112,0.798317485731266,0.5745161103971,2.75175657541048,0.649243880549111,0,0.456469358066384,0.783399478865116,2.50634477090067,0.677167111206413,2.087644976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| |||
|short_description=p2@AK095821 | |||
}} |
Revision as of 11:02, 22 January 2014
Short description: | p2@AK095821 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK095821_5end |
Coexpression cluster: | C1976_Neutrophils_Whole_Eosinophils_CD8_CD19_CD4_blood |
Association with transcript: | 15bp_to_AK095821_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.77e-20 | 18 |
alpha-beta T cell | 7.77e-20 | 18 |
immature T cell | 7.77e-20 | 18 |
mature T cell | 7.77e-20 | 18 |
immature alpha-beta T cell | 7.77e-20 | 18 |
lymphoid lineage restricted progenitor cell | 1.03e-17 | 52 |
hematopoietic stem cell | 1.91e-17 | 168 |
leukocyte | 2.40e-17 | 136 |
lymphocyte | 3.15e-17 | 53 |
common lymphoid progenitor | 3.15e-17 | 53 |
hematopoietic cell | 1.22e-16 | 177 |
CD8-positive, alpha-beta T cell | 2.97e-16 | 11 |
hematopoietic oligopotent progenitor cell | 3.86e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-15 | 161 |
T cell | 3.90e-15 | 25 |
pro-T cell | 3.90e-15 | 25 |
nongranular leukocyte | 9.46e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.25e-11 | 120 |
endothelial cell of vascular tree | 2.22e-09 | 24 |
granulocyte | 7.83e-09 | 8 |
endothelial cell | 2.34e-08 | 36 |
neutrophil | 3.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.36e-17 | 15 |
haemolymphatic fluid | 1.36e-17 | 15 |
organism substance | 1.36e-17 | 15 |
hemolymphoid system | 4.82e-11 | 108 |
hematopoietic system | 5.93e-08 | 98 |
blood island | 5.93e-08 | 98 |
hemopoietic organ | 6.14e-08 | 7 |
immune organ | 6.14e-08 | 7 |
thymus | 5.48e-07 | 4 |
hemolymphoid system gland | 5.48e-07 | 4 |
thymic region | 5.48e-07 | 4 |
pharyngeal gland | 5.48e-07 | 4 |
thymus primordium | 5.48e-07 | 4 |
cardiovascular system | 7.04e-07 | 109 |