FFCP PHASE1:Hg19::chr6:36515009..36515018,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17847 | |||
|TSSclassifier=strong | |||
|UniProt=Q15208 | |||
|association_with_transcript=228bp_to_ENST00000229812,NM_007271,uc003omh.2,uc003omi.2_5end | |||
|description=CAGE_peak_4_at_STK38_5end | |||
|id=chr6:36515009..36515018,- | |||
|ontology_enrichment_celltype=CL:0002087!1.71e-09!119;CL:0000738!5.15e-09!140;CL:0002031!8.06e-08!124;CL:0000791!6.52e-07!18;CL:0000789!6.52e-07!18;CL:0002420!6.52e-07!18;CL:0002419!6.52e-07!18;CL:0000790!6.52e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.18e-08;3!CL:0000226;1.68e-08;3!CL:0000842;1.68e-08;3!CL:0000135;4.23e-08;3!CL:0000388;4.23e-08;3!CL:0000791;1.55e-07;18!CL:0000789;1.55e-07;18!CL:0002419;1.55e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,8.79e-10,115;CL:0000738,1.26e-09,136;CL:0000623,8.25e-09,3;CL:0000825,8.25e-09,3;CL:0000226,1.06e-08,3;CL:0000842,1.06e-08,3;CL:0000135,6.59e-08,3;CL:0000388,6.59e-08,3;CL:0000791,9.34e-08,18;CL:0000789,9.34e-08,18;CL:0002420,9.34e-08,18;CL:0002419,9.34e-08,18;CL:0000790,9.34e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.55e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.23e-08;3!UBERON:0000043;4.23e-08;3!UBERON:0007845;4.23e-08;3!UBERON:0000178;8.71e-08;15!UBERON:0000179;8.71e-08;15!UBERON:0000463;8.71e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.59e-08,3;UBERON:0000043,6.59e-08,3;UBERON:0007845,6.59e-08,3;UBERON:0000178,7.49e-08,15;UBERON:0000179,7.49e-08,15;UBERON:0000463,7.49e-08,15 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.563817616383885,0,1.78784437770915,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.547497700291537,0.376627918784408,0.229240217243854,0.0821005894499457,0.314843125254717,0.393364276848904,0.767658796194425,0,0,0,0,0.154934401160603,0.142169232487422,0,0,1.40381113229099,0.434021741431704,0.447830948479849,0.32389366601898,0.515151135268373,1.89017710413434,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0.619412741790207,1.1507695692886,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,0,1.31769637679823,0.818718450173537,0.224723484445085,1.22433556948361,0.641858054152187,0,0.329851300186716,0.997318288108159,1.70489900213078,0.580418477257168,0.56738522469114,0,1.25624332628372,1.5644487552606,0.65156653411535,1.21079900526674,0.736555271975129,0,0.633765858935825,0.212604299965044,0,1.01095768031846,0.300353785683013,0.16072558669708,0.285012743741249,1.59133341759272,0.182664153764634,0,0,0,0,0,1.72425731986345,0.661044872784862,0.954053754535364,0.569212969109448,0,0.764546456250458,1.32171328579026,0,0,0.786839080455332,3.53709686474248,2.67281948699362,1.00311897234407,0.977766799900771,0.946895611469467,3.89653456815823,1.44833593950726,1.47302953737419,1.32920336750173,0.812411591295047,1.79327847615945,1.30059347559878,0.822189523018381,1.38175008892924,0.869409257205157,1.18629250529648,2.1403266247177,0,1.47302145506836,0.766440987203842,0.34362744548263,2.53019692019503,1.27426165729639,1.95325036156926,0.950452044448374,0.752875595388864,0.76791966692651,0,0.473554504088034,0,1.20964045934839,3.7441627409691,1.59306844271079,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.378139268656271,0.443458794925128,0.43917392846563,0.458426764241994,0,0,0.97364218096405,0.522389211897802,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,1.04142150482278,0,0,0.275118041940067,0.626984899610432,0,0,0.33472061276467,0,0,0,0.735326160691737,0,0.17859945656816,0.673588117878509,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0,0.506522046658319,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.491337269247072,0.206651562351531,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.625592599359821,0,0,1.22595118319608,0.300476117813194,0,0.717558542755448,0.213557388818567,0.211931901159562,1.20036438433761,0.92747276314595,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.552299391853796,0.323292113637624,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.731842236777572,0.265059536642971,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.591534000199219,0.505754070234305,0,0.661763836394364,0,0.71181185733329,0.539325232640658,0.196221465125346,0,0,0,0,0,2.53510069643662,0.982827216677626,0,1.32438929824395,0.491953754172454,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.234817388471643,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0.528290604079356,0.207328115540772,0.864719720501769,0.25248486685276,0.063497894292169,0,0,0,0.308482478109971,0.300343057843917,0,0,1.30788020649984,0.36669142910475,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.699810938274399,0,1.00451418286425,0,0,0,0,0.434343920002738,0.821905290201534,0.358121926479791,0.448340575974109,1.57624608161542,4.31255149719035,3.08023287071396,0.254094624222463,0,0.773288812777695,0.167516265334349,0,2.24702107184155,11.966458368161,0,0,0.500170521059677,0,0.623912584592421,3.56857977594324,1.10391690523754,0.702848489956279,0,0,0,0,0,0.434418072340414,0,0,1.6541442089831,3.01999881146064,2.45473382947922,0,0,0.30239029332968,0.744323423456331,0.153461973288062,1.40330047216537,0.640695746278505,0,0.965123526861645,0,0.462629081407967,0.532685175939381,0.246381468041427,0,0,0.241718899183244,0.40101294060657,0.276242966807689,0.574072240823034,1.0925470080403,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0.824125183365091,0.165018999841176,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.870100163485371,0.340906509664404,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.848432591722276,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,0.422215270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| |||
|short_description=p4@STK38 | |||
}} |
Revision as of 11:38, 22 January 2014
Short description: | p4@STK38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STK38_5end |
Coexpression cluster: | NA |
Association with transcript: | 228bp_to_ENST00000229812, NM_007271, uc003omh.2, uc003omi.2_5end |
EntrezGene: | STK38 |
HGNC: | 17847 |
UniProt: | Q15208 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 8.79e-10 | 115 |
leukocyte | 1.26e-09 | 136 |
natural killer cell | 8.25e-09 | 3 |
pro-NK cell | 8.25e-09 | 3 |
single nucleate cell | 1.06e-08 | 3 |
mononuclear cell | 1.06e-08 | 3 |
fibrocyte | 6.59e-08 | 3 |
tendon cell | 6.59e-08 | 3 |
mature alpha-beta T cell | 9.34e-08 | 18 |
alpha-beta T cell | 9.34e-08 | 18 |
immature T cell | 9.34e-08 | 18 |
mature T cell | 9.34e-08 | 18 |
immature alpha-beta T cell | 9.34e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.59e-08 | 3 |
tendon | 6.59e-08 | 3 |
regular connective tissue | 6.59e-08 | 3 |
blood | 7.49e-08 | 15 |
haemolymphatic fluid | 7.49e-08 | 15 |
organism substance | 7.49e-08 | 15 |