FFCP PHASE1:Hg19::chr6:74405870..74405932,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135228 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21685 | |||
|TSSclassifier=strong | |||
|UniProt=Q6YHK3 | |||
|association_with_transcript=43bp_to_ENST00000287097_5end | |||
|coexpression_cluster_id=C1979 | |||
|description=CAGE_peak_1_at_CD109_5end | |||
|id=chr6:74405870..74405932,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.24e-16!180;CL:0000057!1.31e-14!75;CL:0002371!1.32e-13!591;CL:0000012!4.22e-13!682;CL:0002620!3.12e-12!23;CL:0000548!3.13e-12!679;CL:0000004!3.13e-12!679;CL:0000255!3.13e-12!679;CL:0000063!4.88e-11!578;CL:0000144!2.00e-10!625;CL:0000557!1.21e-08!71;CL:0002009!2.03e-07!65;CL:0000860!3.21e-07!45;CL:0002057!8.00e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.98e-12;23!CL:0000860;8.57e-11;33!CL:0002057;8.57e-11;33!CL:0000473;2.70e-09;39!CL:0000234;2.70e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.75e-14,76;CL:0002620,2.97e-12,23;CL:0000557,4.02e-08,67;CL:0000473,3.42e-07,48;CL:0000234,3.42e-07,48;CL:0002009,6.59e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.03e-14!167;UBERON:0003102!3.34e-14!95;UBERON:0004765!1.44e-13!101;UBERON:0001434!1.44e-13!101;UBERON:0000926!4.02e-12!448;UBERON:0004120!4.02e-12!448;UBERON:0006603!4.02e-12!448;UBERON:0001474!1.11e-10!86;UBERON:0002097!1.11e-10!40;UBERON:0002199!2.05e-10!45;UBERON:0002416!2.05e-10!45;UBERON:0002371!1.07e-09!80;UBERON:0000062!1.28e-09!511;UBERON:0000468!1.73e-09!659;UBERON:0000467!8.00e-09!625;UBERON:0000480!1.38e-08!626;UBERON:0000165!3.03e-07!28;UBERON:0000930!3.03e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.79e-09;41!UBERON:0002199;6.30e-08;46!UBERON:0002416;6.30e-08;46!UBERON:0000165;2.92e-07;28!UBERON:0003102;8.28e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.60e-15,99;UBERON:0002204,1.08e-14,167;UBERON:0001434,9.75e-14,100;UBERON:0004765,3.28e-12,90;UBERON:0002097,2.57e-11,41;UBERON:0002199,5.03e-11,46;UBERON:0002416,5.03e-11,46;UBERON:0001474,4.14e-10,82;UBERON:0000926,2.31e-09,315;UBERON:0004120,2.31e-09,315;UBERON:0006603,2.31e-09,315;UBERON:0002371,3.91e-09,76;UBERON:0004923,2.77e-07,66;UBERON:0000165,4.92e-07,29;UBERON:0000930,4.92e-07,29 | |||
|phase1_expression=47.2363786103447,38.538094300377,43.5549108656551,17.0124607200322,10.7270662662549,20.0637860543085,15.1979926900986,27.7956744307806,9.92505387159386,3.68600904752263,5.58240934377942,121.234961532246,77.8112585773938,83.0472228361913,85.8319203135302,28.9099812974263,21.0943084808392,25.5608531635581,24.3966399395254,18.4681587115182,13.2600449308764,6.26909442956176,6.01095572975219,9.30746090495612,4.89616294419731,0.382067028739756,0.328402357799783,0.314843125254717,9.8341069212226,12.2825407391108,32.3565697730599,27.5826367343678,21.686826152034,26.2525347218419,0,0,50.7928760049286,18.281848481552,14.6397446653203,24.956250132323,2.46307021663917,5.18229865630367,2.57575567634187,34.4593825907568,136.035339727971,72.7752183563449,93.2040437991795,280.416499630885,218.962404222838,163.121586446659,289.973919790942,206.921951152512,117.558277131187,196.872828493067,108.341189275473,60.0493063140909,171.112156086269,148.991670187091,103.150271728994,287.231479233104,160.473618575559,55.4150184313683,157.177362205846,90.3596471129312,21.1852744198866,89.6468655012001,31.7639346987743,174.115325022923,275.342980925866,221.098243909809,19.3727840842678,120.426786967934,39.8742608175514,1.90129757680748,4.46469029926591,0.419317291016752,3.14520167210186,3.30389164251314,1.76798145366788,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,103.09363629164,60.5349248020059,30.5525538339089,1.37696839079683,1.17903228824749,1.43921049299656,2.00623794468814,0,0,0,17.0457999034316,0,0.443067789167242,0.812411591295047,10.247305578054,10.5348071523501,14.3060977005198,16.8573510849367,17.6779882298382,1.63115219478266,2.94294910898684,1.04535523804977,21.5287751125376,2.29932296161153,2.06176467289578,2.27717722817553,1.59282707162048,1.30216690771284,0,0.752875595388864,1.4078527226986,0,0.236777252044017,1.64225599384209,0.403213486449465,0,0,78.0181972204677,22.13312837022,17.1335832870331,101.202962667679,65.1739283826656,73.7268781510593,120.883463951767,109.979480688396,9.35894689924272,8.86917589850256,8.60780899792635,11.3296900305521,12.3860398019464,25.2133421093412,45.4366351116557,44.7513424859117,33.9042799323106,6.91622810485492,9.15191857248205,7.4291500265913,20.0750031440372,40.4310259699879,15.9684630739493,17.5245461996443,6.71199097935849,3.30141650328081,8.98678356108286,55.5596032214057,86.0954355701839,56.2330629444646,8.86224497640123,11.4040815857777,8.7862340717341,42.6489173201208,3.24056779152704,81.8878508365011,59.2757543733088,63.0624290706604,22.9974956198825,24.6809071487714,26.9306563577699,0,0,34.4514301192602,68.0851573822586,27.2255600078846,44.8867122956812,160.915344240084,32.2748227800505,16.2596504041269,8.5399196583764,5.92002116201184,61.6197850091537,26.6727130697982,24.5192854670188,16.0438873303627,50.1273054297599,27.4156075245542,149.836836878554,60.4700130837116,152.736551523941,150.785896258594,174.822779917582,158.147608346732,101.260468942427,41.7636678860011,112.72842726276,98.6042371544104,69.4820071272745,17.2930658768225,5.03032699271367,85.0097375468034,48.1706301507062,113.873351463999,88.2345017970484,67.1208272799853,70.4616496271939,14.0655907118426,295.813509250933,135.395384510972,81.3818500452717,333.101116653687,152.51774327289,189.365796933537,107.947776672322,434.599055521261,93.9292729753955,199.42268165285,127.857309214154,104.423352704952,365.304870699596,89.1656069314616,43.9161934084163,82.5223843007278,71.4594835947987,71.98795344264,0.975789649036763,1.59035721985782,1.97529702878181,2.59152637538426,3.02785021050754,1.09493207722749,34.4188971125595,84.264562903268,67.6861114627155,72.9057647010207,174.69483456404,26.500723208925,27.8164738628868,29.8853677055518,25.6984956466478,25.2740155147191,31.5569923417758,23.4606476198686,29.2369983036766,26.5475538293009,28.0499072757366,1.40241773803446,11.5240723172792,10.2906097969879,0,0,0,0,1.10689594688802,9.26466175612038,74.9594449340913,20.2323155863715,23.6243085167333,97.6808096422487,23.1323896770331,47.8370001228606,5.77325368101093,5.21686822387846,23.4817388471643,14.5810112238685,12.0376233269919,14.2690614175949,5.53143078571493,2.57545848628462,42.3493250470323,69.0312582160751,53.3585872616534,44.9922403136529,64.3371551001632,56.2847136052274,144.995248255911,121.77562023735,55.9738711581208,105.922596147628,15.4965243863278,60.5398097379054,62.5480597829613,48.855821736009,151.505975781115,236.450835420574,63.2974214934254,61.5860805681739,46.9921641654188,124.041682889538,42.3023120293256,14.913434217933,9.15516144549888,24.4216491783764,17.3224099115422,67.9547247118577,54.099376163584,18.0837919277712,19.7614130131596,23.9202858063792,24.1143524439573,29.3064396917709,11.7241954799681,24.4179722426149,18.9345277459577,55.375151329935,11.3725423597615,22.174652442136,11.4546963282643,10.4584015032035,5.29856853264902,12.162378064119,17.0767411086923,42.1667878966063,30.1927317919394,33.309961391893,132.65232168786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| |||
|short_description=p1@CD109 | |||
}} |
Revision as of 12:41, 22 January 2014
Short description: | p1@CD109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD109_5end |
Coexpression cluster: | C1979_Fibroblast_salivary_CD14_immature_amniotic_Melanocyte_Smooth |
Association with transcript: | 43bp_to_ENST00000287097_5end |
EntrezGene: | CD109 |
HGNC: | 21685 |
UniProt: | Q6YHK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.75e-14 | 76 |
skin fibroblast | 2.97e-12 | 23 |
granulocyte monocyte progenitor cell | 4.02e-08 | 67 |
defensive cell | 3.42e-07 | 48 |
phagocyte | 3.42e-07 | 48 |
macrophage dendritic cell progenitor | 6.59e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.60e-15 | 99 |
musculoskeletal system | 1.08e-14 | 167 |
skeletal system | 9.75e-14 | 100 |
skeletal element | 3.28e-12 | 90 |
skin of body | 2.57e-11 | 41 |
integument | 5.03e-11 | 46 |
integumental system | 5.03e-11 | 46 |
bone element | 4.14e-10 | 82 |
mesoderm | 2.31e-09 | 315 |
mesoderm-derived structure | 2.31e-09 | 315 |
presumptive mesoderm | 2.31e-09 | 315 |
bone marrow | 3.91e-09 | 76 |
organ component layer | 2.77e-07 | 66 |
mouth | 4.92e-07 | 29 |
stomodeum | 4.92e-07 | 29 |