FFCP PHASE1:Hg19::chr6:111136513..111136525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19338 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BWU1 | |||
|association_with_transcript=0bp_to_ENST00000368911_5end | |||
|description=CAGE_peak_11_at_CDK19_5end | |||
|id=chr6:111136513..111136525,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000771;4.15e-13;2!CL:0000094;2.29e-12;8!CL:0000775;4.06e-09;3!CL:0000081;5.16e-09;11!CL:0000222;5.44e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.93e-13,2;CL:0000094,2.21e-12,8;CL:0000775,3.99e-09,3;CL:0000081,5.02e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.50e-07;1 | |||
|ontology_enrichment_disease=DOID:1240!2.82e-11!39;DOID:2531!2.26e-10!51;DOID:0060083!2.26e-10!51;DOID:8692!1.69e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.97e-07;1!DOID:4549;1.97e-07;1!DOID:5861;1.97e-07;1!DOID:6496;1.97e-07;1!DOID:5662;5.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.10e-07,1;DOID:4549,2.10e-07,1;DOID:5861,2.10e-07,1;DOID:6496,2.10e-07,1;DOID:5662,9.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-14!115;UBERON:0001049!1.03e-09!57;UBERON:0005068!1.03e-09!57;UBERON:0006241!1.03e-09!57;UBERON:0007135!1.03e-09!57;UBERON:0001017!4.06e-08!82;UBERON:0002020!9.05e-08!34;UBERON:0003528!9.05e-08!34;UBERON:0001893!1.11e-07!34;UBERON:0002780!1.20e-07!41;UBERON:0001890!1.20e-07!41;UBERON:0006240!1.20e-07!41;UBERON:0005743!1.50e-07!86;UBERON:0000955!2.84e-07!69;UBERON:0006238!2.84e-07!69;UBERON:0002791!2.91e-07!33;UBERON:0003080!2.96e-07!42;UBERON:0002616!3.12e-07!59;UBERON:0000073!6.83e-07!94;UBERON:0001016!6.83e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;7.29e-13;2!UBERON:0000122;7.29e-13;2!UBERON:0000941;1.50e-07;1!UBERON:0001785;1.50e-07;1!UBERON:0002464;1.50e-07;1!UBERON:0004904;1.50e-07;1!UBERON:0001021;1.50e-07;1!UBERON:0002336;5.44e-07;1!UBERON:0002038;5.44e-07;1!UBERON:0003112;5.44e-07;1!UBERON:0011215;5.44e-07;1!UBERON:0001018;5.44e-07;1!UBERON:0011158;5.44e-07;1!UBERON:0009661;5.44e-07;1!UBERON:0002950;5.44e-07;1!UBERON:0002473;5.44e-07;1!UBERON:0005340;5.44e-07;1!UBERON:0003544;5.44e-07;1!UBERON:0005970;5.44e-07;1!UBERON:0002316;5.44e-07;1!UBERON:0001020;5.44e-07;1!UBERON:0003128;5.44e-07;1!UBERON:0001891;5.44e-07;1!UBERON:0002437;5.44e-07;1!UBERON:0001703;5.44e-07;1!UBERON:0002241;5.44e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,8.00e-13,2;UBERON:0000122,8.00e-13,2;UBERON:0000941,1.55e-07,1;UBERON:0001785,1.55e-07,1;UBERON:0002464,1.55e-07,1;UBERON:0004904,1.55e-07,1;UBERON:0001021,1.55e-07,1;UBERON:0003902,1.55e-07,1;UBERON:0005425,1.55e-07,1;UBERON:0002336,5.78e-07,1;UBERON:0011215,5.78e-07,1;UBERON:0001018,5.78e-07,1;UBERON:0002473,5.78e-07,1;UBERON:0005340,5.78e-07,1;UBERON:0003544,5.78e-07,1;UBERON:0005970,5.78e-07,1;UBERON:0002316,5.78e-07,1;UBERON:0001020,5.78e-07,1;UBERON:0002437,5.78e-07,1;UBERON:0003112,6.88e-07,1;UBERON:0011158,6.88e-07,1;UBERON:0003128,6.88e-07,1;UBERON:0001703,6.88e-07,1;UBERON:0002241,6.88e-07,1;UBERON:0004761,6.88e-07,1;UBERON:0009617,6.88e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0,0,0,0.327447688744282,0,0,0,0.696518949197069,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0.877955241761676,0,0.300476117813194,0,0,0,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0,0.710019185033229,0.302256294682921,0.339121184620975,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.537182889719687,0.112085143993527,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0,3.74503511973591,0,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,0.238231775457789,0.411362273086194,0.648473311192717,2.70015718619057,1.58625035258854,0.320472213382419,7.69983884210687,0,0.185803175125719,0.144269212976445,0.497992903438899,0,0.199579371432817,0.383010740264733,1.05836791361941,0.324621940274555,0.280797178113459,0.228234679033192,0,2.50634477090067,0.50787533340481,0,0.201799707191048,0.851692475380653,0.343505344755765,0.921722292925374,1.56573275524691,1.00109485027145,0.19538809540204,0.835218521685727,1.23087398947712,0.270455678475983,0.33307196799782,4.22961015263549,0.37428108081644,0.146508179271894,0,0.222886768554957,0.568272293612826,0.23874448473769,0,0,0,1.26602474769461,0,0.329607748453519,0.422250816255987,0,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0.969332746095218,0.556608588971108,0,0.7812832832557,0.0874599999961957,0,0.227586896570999,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0.658156191461918,0,0,0.0769502585037971,0.113942055847001,0,0.448788222048861,0,0,0.0915975934018623,0,1.02193298195737,0.470940769185074,0.498635045700469,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.353830258013357,1.83309043480088,0,0.247127877893006,0,1.21322039365219,0,0.937057782901357,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,0,0,0,0.0967563312890851,0,0,0.290967049465258,3.08896443420251,0,0,0.19871461170299,0.823040347426423,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0.407712618220842,0.209205692624666,0.509991088181609,0,0,1.77976992559591,0,0.429765441419957,0.525774708558629,0,0.687481272035051,0,0,0,0,0.335917362433631,0,0,0.157566364614447,0.0824158583811665,0.26961417541674,0.295282444544246,0,0,1.0896272488926,0.160753148465019,0.137539436597234,0,0,0,0.425246896606173,0,0.157611414598396,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0.410462603746695,0.170388021785422,0,0,0,0.64641478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| |||
|short_description=p11@CDK19 | |||
}} |
Revision as of 13:22, 22 January 2014
Short description: | p11@CDK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CDK19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368911_5end |
EntrezGene: | CDK19 |
HGNC: | 19338 |
UniProt: | Q9BWU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.93e-13 | 2 |
granulocyte | 2.21e-12 | 8 |
neutrophil | 3.99e-09 | 3 |
blood cell | 5.02e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 8.00e-13 | 2 |
neuron projection bundle | 8.00e-13 | 2 |
cranial nerve II | 1.55e-07 | 1 |
cranial nerve | 1.55e-07 | 1 |
nerve trunk | 1.55e-07 | 1 |
nerve connecting eye with brain | 1.55e-07 | 1 |
nerve | 1.55e-07 | 1 |
retinal neural layer | 1.55e-07 | 1 |
presumptive neural retina | 1.55e-07 | 1 |
corpus callosum | 5.78e-07 | 1 |
central nervous system cell part cluster | 5.78e-07 | 1 |
axon tract | 5.78e-07 | 1 |
intercerebral commissure | 5.78e-07 | 1 |
dorsal telencephalic commissure | 5.78e-07 | 1 |
brain white matter | 5.78e-07 | 1 |
brain commissure | 5.78e-07 | 1 |
white matter | 5.78e-07 | 1 |
nervous system commissure | 5.78e-07 | 1 |
cerebral hemisphere white matter | 5.78e-07 | 1 |
olfactory region | 6.88e-07 | 1 |
primary subdivision of skull | 6.88e-07 | 1 |
cranium | 6.88e-07 | 1 |
neurocranium | 6.88e-07 | 1 |
chondrocranium | 6.88e-07 | 1 |
cartilaginous neurocranium | 6.88e-07 | 1 |
head paraxial mesoderm | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.10e-07 | 1 |
extraosseous chondrosarcoma | 2.10e-07 | 1 |
myxoid chondrosarcoma | 2.10e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.10e-07 | 1 |
pleomorphic carcinoma | 9.18e-07 | 1 |