FFCP PHASE1:Hg19::chr6:152958486..152958519,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NF91,E7ENN3,E7EQI5,E9PEL9 | |||
|association_with_transcript=14bp_to_ENST00000265368,ENST00000341594,ENST00000367255,ENST00000448038,NM_182961,uc003qou.3,uc010kiw.2_5end | |||
|description=CAGE_peak_4_at_SYNE1_5end | |||
|id=chr6:152958486..152958519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.23e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-64!115;UBERON:0001049!5.02e-29!57;UBERON:0005068!5.02e-29!57;UBERON:0006241!5.02e-29!57;UBERON:0007135!5.02e-29!57;UBERON:0002616!3.88e-23!59;UBERON:0003080!9.81e-23!42;UBERON:0001017!4.63e-22!82;UBERON:0002780!6.49e-22!41;UBERON:0001890!6.49e-22!41;UBERON:0006240!6.49e-22!41;UBERON:0000955!6.68e-22!69;UBERON:0006238!6.68e-22!69;UBERON:0005743!6.66e-21!86;UBERON:0000073!8.62e-21!94;UBERON:0001016!8.62e-21!94;UBERON:0003075!6.14e-18!86;UBERON:0007284!6.14e-18!86;UBERON:0002020!7.14e-18!34;UBERON:0003528!7.14e-18!34;UBERON:0001893!1.17e-17!34;UBERON:0002791!6.15e-17!33;UBERON:0002346!1.30e-16!90;UBERON:0001869!1.31e-16!32;UBERON:0002619!1.63e-14!22;UBERON:0001950!4.66e-13!20;UBERON:0003056!6.28e-12!61;UBERON:0000956!1.07e-11!25;UBERON:0000203!1.07e-11!25;UBERON:0000153!1.69e-10!129;UBERON:0007811!1.69e-10!129;UBERON:0000033!1.21e-09!123;UBERON:0004121!1.30e-08!169;UBERON:0000924!3.86e-08!173;UBERON:0006601!3.86e-08!173;UBERON:0002308!5.61e-08!9;UBERON:0000125!5.61e-08!9;UBERON:0002420!8.28e-08!9;UBERON:0007245!8.28e-08!9;UBERON:0010009!8.28e-08!9;UBERON:0010011!8.28e-08!9;UBERON:0000454!8.28e-08!9;UBERON:0002298!9.51e-08!8;UBERON:0003076!1.79e-07!15;UBERON:0003057!1.79e-07!15;UBERON:0000062!2.02e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.10e-26;41!UBERON:0001890;7.10e-26;41!UBERON:0000073;9.22e-26;53!UBERON:0002616;9.22e-26;53!UBERON:0003528;5.95e-25;34!UBERON:0002020;5.95e-25;34!UBERON:0001893;7.05e-25;34!UBERON:0001869;1.79e-24;32!UBERON:0002791;4.35e-24;32!UBERON:0007023;8.67e-24;114!UBERON:0002619;6.97e-23;22!UBERON:0001950;1.48e-20;20!UBERON:0000956;2.23e-19;25!UBERON:0000203;2.23e-19;25!UBERON:0000955;7.25e-17;68!UBERON:0001017;2.44e-16;75!UBERON:0001016;2.34e-14;83!UBERON:0000125;7.16e-12;9!UBERON:0002308;7.16e-12;9!UBERON:0002420;1.10e-11;9!UBERON:0007245;1.10e-11;9!UBERON:0010009;1.10e-11;9!UBERON:0010011;1.10e-11;9!UBERON:0000454;1.10e-11;9!UBERON:0004732;9.87e-11;13!UBERON:0004733;1.07e-09;12!UBERON:0002028;1.07e-09;12!UBERON:0002298;1.41e-09;6!UBERON:0009663;2.66e-09;7!UBERON:0001894;2.43e-08;7!UBERON:0000200;9.36e-08;6!UBERON:0000349;1.54e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.45e-91,114;UBERON:0001049,1.81e-47,56;UBERON:0005068,1.81e-47,56;UBERON:0006241,1.81e-47,56;UBERON:0007135,1.81e-47,56;UBERON:0000073,9.26e-45,53;UBERON:0002616,9.26e-45,53;UBERON:0000955,9.82e-37,68;UBERON:0006238,9.82e-37,68;UBERON:0002780,4.55e-36,41;UBERON:0001890,4.55e-36,41;UBERON:0003080,4.55e-36,41;UBERON:0006240,4.55e-36,41;UBERON:0001017,2.36e-35,81;UBERON:0003075,9.14e-35,82;UBERON:0007284,9.14e-35,82;UBERON:0001016,8.80e-33,89;UBERON:0002346,2.77e-32,86;UBERON:0003528,1.72e-29,34;UBERON:0002020,1.72e-29,34;UBERON:0001893,3.93e-29,34;UBERON:0001869,1.97e-27,32;UBERON:0002791,6.00e-27,32;UBERON:0010371,1.47e-25,104;UBERON:0003056,5.74e-23,61;UBERON:0002619,7.03e-23,22;UBERON:0010314,6.03e-22,132;UBERON:0001950,1.60e-20,20;UBERON:0000956,2.25e-19,25;UBERON:0000203,2.25e-19,25;UBERON:0011216,2.39e-15,223;UBERON:0004121,1.25e-14,171;UBERON:0000924,1.25e-14,171;UBERON:0006601,1.25e-14,171;UBERON:0003076,3.23e-12,15;UBERON:0003057,3.23e-12,15;UBERON:0000025,5.56e-12,192;UBERON:0000125,6.64e-12,9;UBERON:0002308,6.64e-12,9;UBERON:0002420,1.24e-11,9;UBERON:0007245,1.24e-11,9;UBERON:0010009,1.24e-11,9;UBERON:0010011,1.24e-11,9;UBERON:0000454,1.24e-11,9;UBERON:0004732,9.56e-11,13;UBERON:0004733,9.90e-10,12;UBERON:0002028,9.90e-10,12;UBERON:0007277,9.90e-10,12;UBERON:0002298,1.27e-09,6;UBERON:0004111,1.58e-09,240;UBERON:0009663,2.59e-09,7;UBERON:0001894,2.50e-08,7;UBERON:0006222,2.50e-08,7;UBERON:0000200,8.73e-08,6;UBERON:0000349,1.55e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0.641858054152187,0,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.450530678524519,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0.434473211648397,2.43806866313962,0,0,1.80719576192283,0.50133791063589,1.88300474649071,0,0,0,0,0.087834785693126,4.91171533116422,0,0,6.81549526674835,6.44280028007289,2.79211717089617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,4.96971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.877955241761676,2.14541457059314,0.600952235626387,0,2.87023417102179,0.85422955527427,0.423863802319124,1.20036438433761,0.103052529238439,3.34932702059318,0.930584281657949,4.05063197379039,0.584622030967192,3.78650661366172,0.276149695926898,0.161646056818812,0,0.403008392910561,1.01736355386293,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.646358578788889,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0.985153801009636,0.862510299438069,1.54011643535698,0,0,0,0,0,5.99205619157746,20.9413021442817,3.72973962092432,0,0,0,0,0.535286966391485,0.946214490203608,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0.992431231275107,5.52463103837025,1.40330047216537,0.768834895534206,1.53512174720011,0.965123526861645,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.564214628977,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,1.56989728039846,0,0.823611089208164,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,1.89996871767898,1.97576935775941,0,0,0,0,0,4.80133383961574,0,0,0,0,1.52234282769651,2.29391162142713,1.70894156152249,2.38231775457789,1.64544909234478,1.29694662238543,2.16012574895246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40676990152261,0,0,0,0,0,0,0,0,0,0,0,13.0392279551986,0,13.4846494975749,0,0,0,0,7.95318118213038,4.07941307590487,0.222617410045812,0,0,2.39097585901284,0.552567831062295,0,0.102268682502155,0,4.66559381492711,0,0,0,2.95930216910801,0,4.44547960578548,3.87733098438087,2.50473865036998,1.99613798001194,0,0,9.42499448065232,0,0,0,0,0,0,7.97167247232455,4.46206822914009,30.5163472634166,28.8611868420496,27.1903809437264,4.16832254592548,0,0,4.00141344219745,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.59223616106011,0,0,0,0,3.97666684585995,0.802577647298789,2.57690890297873,0,0,0,11.4429476826323,0,3.0607276163049,2.65383634439649,0,0.103688191397247,0,0,0,0,0,0,0,0,0,4.89234671077684,2.0638323896594,0,0,0,2.23074737923365,2.02989091390451,0.90392296312213,0,0.19871461170299,6.01452561580848,0,0,0.85381197895741,0.599428828746391,0,0.114536596165916,0,0,0.124252535565433,0,0.67952103036807,1.46443984837266,0,0,6.00420288709789,4.24406674565178,0,0.429765441419957,0,5.86493042671734,4.58320848023367,6.46085722119133,4.3929380109778,7.2968428183217,8.03417246790741,3.56072404179649,0.720599767084807,0,0,0,0,0,0,4.77137813885582,6.26535668113248,0.321506296930038,0.275078873194468,0.415440338029185,0,0,5.28521142924815,0,5.12237097444788,2.20309270166992,0,0,0,1.42939065274673,6.62091970365432,0.76280561296425,0,0,0,0,0,0.170388021785422,0.113312091520126,1.02586563574658,1.32506888912221,7.88626033805458,6.87609529061988,0,0,14.0959384589357,2.04365596629566,3.31391244277756,0.992332043623902,0.197611631897944,0,0,4.35214242695579,7.520696820681,2.75711019087115,4.91808946064707,0,3.54427271986794,3.78281421196086,4.256491644021,6.88091034828085,9.87268558677985,7.38947195002463,0,0,0,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| |||
|short_description=p4@SYNE1 | |||
}} |
Revision as of 14:41, 22 January 2014
Short description: | p4@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000265368, ENST00000341594, ENST00000367255, ENST00000448038, NM_182961, uc003qou.3, uc010kiw.2_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | Q8NF91E7ENN3E7EQI5E9PEL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data