FFCP PHASE1:Hg19::chr7:91623944..91623998,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4706 | |||
|description=CAGE_peak_at_chr7:91623944..91623998,+ | |||
|id=chr7:91623944..91623998,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.09e-12!235;DOID:14566!5.60e-12!239;DOID:0050687!1.15e-07!143;DOID:0050686!2.08e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.46e-10!57;UBERON:0005068!5.46e-10!57;UBERON:0006241!5.46e-10!57;UBERON:0007135!5.46e-10!57;UBERON:0000955!1.11e-08!69;UBERON:0006238!1.11e-08!69;UBERON:0003080!1.27e-08!42;UBERON:0002780!1.94e-08!41;UBERON:0001890!1.94e-08!41;UBERON:0006240!1.94e-08!41;UBERON:0001017!2.72e-08!82;UBERON:0000073!3.57e-08!94;UBERON:0001016!3.57e-08!94;UBERON:0002616!5.57e-08!59;UBERON:0002020!6.83e-08!34;UBERON:0003528!6.83e-08!34;UBERON:0002346!1.48e-07!90;UBERON:0005743!1.79e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.48e-10;34!UBERON:0002020;5.48e-10;34!UBERON:0002791;5.68e-10;32!UBERON:0002780;2.14e-09;41!UBERON:0001890;2.14e-09;41!UBERON:0000956;4.08e-09;25!UBERON:0000203;4.08e-09;25!UBERON:0001869;5.73e-09;32!UBERON:0000073;1.23e-08;53!UBERON:0002616;1.23e-08;53!UBERON:0001893;2.97e-08;34!UBERON:0002619;3.78e-08;22!UBERON:0001950;7.49e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.17e-14,56;UBERON:0005068,6.17e-14,56;UBERON:0006241,6.17e-14,56;UBERON:0007135,6.17e-14,56;UBERON:0000073,2.29e-13,53;UBERON:0002616,2.29e-13,53;UBERON:0002780,4.24e-12,41;UBERON:0001890,4.24e-12,41;UBERON:0003080,4.24e-12,41;UBERON:0006240,4.24e-12,41;UBERON:0002346,4.34e-12,86;UBERON:0003528,1.62e-11,34;UBERON:0002020,1.62e-11,34;UBERON:0000955,2.32e-11,68;UBERON:0006238,2.32e-11,68;UBERON:0003075,1.48e-10,82;UBERON:0007284,1.48e-10,82;UBERON:0002791,1.85e-10,32;UBERON:0001016,2.77e-10,89;UBERON:0001017,7.06e-10,81;UBERON:0001893,2.65e-09,34;UBERON:0001869,2.83e-09,32;UBERON:0003056,3.80e-09,61;UBERON:0000956,8.52e-09,25;UBERON:0000203,8.52e-09,25;UBERON:0002619,4.17e-08,22;UBERON:0010371,3.31e-07,104;UBERON:0001950,8.19e-07,20 | |||
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| |||
|short_description=p@chr7:91623944..91623998,+ | |||
}} |
Revision as of 17:48, 22 January 2014
Short description: | p@chr7:91623944..91623998, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr7:91623944..91623998, + |
Coexpression cluster: | C4706_pineal_parietal_small_renal_Monocytederived_CD4_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.17e-14 | 56 |
neural rod | 6.17e-14 | 56 |
future spinal cord | 6.17e-14 | 56 |
neural keel | 6.17e-14 | 56 |
regional part of nervous system | 2.29e-13 | 53 |
regional part of brain | 2.29e-13 | 53 |
regional part of forebrain | 4.24e-12 | 41 |
forebrain | 4.24e-12 | 41 |
anterior neural tube | 4.24e-12 | 41 |
future forebrain | 4.24e-12 | 41 |
neurectoderm | 4.34e-12 | 86 |
brain grey matter | 1.62e-11 | 34 |
gray matter | 1.62e-11 | 34 |
brain | 2.32e-11 | 68 |
future brain | 2.32e-11 | 68 |
neural plate | 1.48e-10 | 82 |
presumptive neural plate | 1.48e-10 | 82 |
regional part of telencephalon | 1.85e-10 | 32 |
nervous system | 2.77e-10 | 89 |
central nervous system | 7.06e-10 | 81 |
telencephalon | 2.65e-09 | 34 |
cerebral hemisphere | 2.83e-09 | 32 |
pre-chordal neural plate | 3.80e-09 | 61 |
cerebral cortex | 8.52e-09 | 25 |
pallium | 8.52e-09 | 25 |
regional part of cerebral cortex | 4.17e-08 | 22 |
ecto-epithelium | 3.31e-07 | 104 |
neocortex | 8.19e-07 | 20 |