FFCP PHASE1:Hg19::chr7:100271355..100271371,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2783 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4398 | |||
|TSSclassifier=strong | |||
|UniProt=E7EP32,P62879,Q6FHM2 | |||
|association_with_transcript=0bp_to_ENST00000424361,ENST00000436220,NM_005273,uc003uwb.2,uc003uwc.2,uc003uwd.2,uc010lhd.2,uc010lhe.2,uc010lhf.2_5end | |||
|description=CAGE_peak_2_at_GNB2_5end | |||
|id=chr7:100271355..100271371,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.74e-13!119;CL:0000220!9.15e-13!246;CL:0002321!1.56e-12!248;CL:0000183!1.01e-11!59;CL:0002371!1.51e-11!591;CL:0000144!2.05e-11!625;CL:0000393!1.20e-10!60;CL:0000211!1.20e-10!60;CL:0000548!1.96e-10!679;CL:0000004!1.96e-10!679;CL:0000255!1.96e-10!679;CL:0000055!3.92e-10!180;CL:0000680!6.51e-10!57;CL:0000056!6.51e-10!57;CL:0000355!6.51e-10!57;CL:0000012!7.46e-10!682;CL:0000192!8.92e-10!42;CL:0000514!8.92e-10!42;CL:0000187!9.06e-10!54;CL:0000359!4.35e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.44e-08;32!CL:0000192;9.72e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.98e-14,121;CL:0002321,4.20e-13,250;CL:0000393,5.00e-11,61;CL:0000211,5.00e-11,61;CL:0000680,2.74e-10,58;CL:0000056,2.74e-10,58;CL:0000355,2.74e-10,58;CL:0000192,3.54e-10,43;CL:0000514,3.54e-10,43;CL:0000187,3.78e-10,55;CL:0000359,4.35e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;9.72e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.76e-11!70;UBERON:0004872!5.58e-11!84;UBERON:0000914!8.34e-11!83;UBERON:0002329!8.34e-11!83;UBERON:0003077!8.34e-11!83;UBERON:0003059!8.34e-11!83;UBERON:0007282!8.34e-11!83;UBERON:0009618!8.34e-11!83;UBERON:0007285!8.34e-11!83;UBERON:0000486!2.30e-10!82;UBERON:0003914!2.85e-10!118;UBERON:0001981!2.89e-10!60;UBERON:0007500!2.89e-10!60;UBERON:0004537!2.89e-10!60;UBERON:0006965!2.89e-10!60;UBERON:0001637!3.89e-10!42;UBERON:0003509!3.89e-10!42;UBERON:0004572!3.89e-10!42;UBERON:0004535!6.21e-10!110;UBERON:0001009!7.14e-10!113;UBERON:0002049!1.24e-09!79;UBERON:0007798!1.24e-09!79;UBERON:0005256!2.33e-09!143;UBERON:0001134!2.97e-09!61;UBERON:0002036!2.97e-09!61;UBERON:0003082!2.97e-09!61;UBERON:0000055!1.40e-08!69;UBERON:0003081!2.36e-08!216;UBERON:0002100!3.46e-08!216;UBERON:0002385!3.60e-08!63;UBERON:0001015!3.60e-08!63;UBERON:0000383!3.60e-08!63;UBERON:0004573!3.18e-07!33;UBERON:0004571!3.18e-07!33;UBERON:0000926!3.54e-07!448;UBERON:0004120!3.54e-07!448;UBERON:0006603!3.54e-07!448;UBERON:0000490!3.84e-07!138;UBERON:0000353!7.77e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.58e-07;74!UBERON:0001637;3.36e-07;42!UBERON:0003509;3.36e-07;42!UBERON:0004572;3.36e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.92e-14,78;UBERON:0007524,1.21e-11,73;UBERON:0002329,1.59e-11,71;UBERON:0003059,1.59e-11,71;UBERON:0007282,1.59e-11,71;UBERON:0004290,1.59e-11,71;UBERON:0009618,1.59e-11,71;UBERON:0003077,2.64e-11,72;UBERON:0007285,2.64e-11,72;UBERON:0000486,1.03e-10,83;UBERON:0004872,1.10e-10,83;UBERON:0000926,1.98e-10,315;UBERON:0004120,1.98e-10,315;UBERON:0006603,1.98e-10,315;UBERON:0001637,3.89e-10,42;UBERON:0003509,3.89e-10,42;UBERON:0004572,3.89e-10,42;UBERON:0003914,5.84e-10,117;UBERON:0007500,5.88e-10,59;UBERON:0001981,5.88e-10,59;UBERON:0004537,5.88e-10,59;UBERON:0006965,5.88e-10,59;UBERON:0004535,1.14e-09,109;UBERON:0001134,1.29e-09,62;UBERON:0002036,1.29e-09,62;UBERON:0003082,1.29e-09,62;UBERON:0001009,1.31e-09,112;UBERON:0002049,2.39e-09,78;UBERON:0007798,2.39e-09,78;UBERON:0000490,6.46e-09,148;UBERON:0002385,1.64e-08,64;UBERON:0001015,1.64e-08,64;UBERON:0000383,1.64e-08,64;UBERON:0000055,2.68e-08,68;UBERON:0002100,7.44e-08,199;UBERON:0005256,7.59e-08,122;UBERON:0003104,1.27e-07,160;UBERON:0009142,1.27e-07,160;UBERON:0004573,3.18e-07,33;UBERON:0004571,3.18e-07,33;UBERON:0003081,4.18e-07,203 | |||
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| |||
|short_description=p2@GNB2 | |||
}} |
Revision as of 18:20, 22 January 2014
Short description: | p2@GNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424361, ENST00000436220, NM_005273, uc003uwb.2, uc003uwc.2, uc003uwd.2, uc010lhd.2, uc010lhe.2, uc010lhf.2_5end |
EntrezGene: | GNB2 |
HGNC: | 4398 |
UniProt: | E7EP32P62879Q6FHM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.98e-14 | 121 |
embryonic cell | 4.20e-13 | 250 |
electrically responsive cell | 5.00e-11 | 61 |
electrically active cell | 5.00e-11 | 61 |
muscle precursor cell | 2.74e-10 | 58 |
myoblast | 2.74e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.74e-10 | 58 |
smooth muscle cell | 3.54e-10 | 43 |
smooth muscle myoblast | 3.54e-10 | 43 |
muscle cell | 3.78e-10 | 55 |
vascular associated smooth muscle cell | 4.35e-09 | 32 |