FFCP PHASE1:Hg19::chr7:133261410..133261422,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60412 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30389 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000489931_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_EXOC4_5end | |||
|id=chr7:133261410..133261422,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.04e-20!8;CL:0000540!4.75e-16!6;CL:0000031!4.75e-16!6;CL:0000404!4.75e-16!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.93e-34;6!CL:0000404;9.93e-34;6!CL:0002319;1.81e-13;25!CL:0000047;3.43e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.55e-44,8;CL:0000540,9.39e-34,6;CL:0000031,9.39e-34,6;CL:0000404,9.39e-34,6;CL:0002319,1.81e-13,25 | |||
|ontology_enrichment_development_v019=CL:0000031;9.93e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!4.11e-29!20;UBERON:0002619!1.65e-26!22;UBERON:0000956!2.36e-23!25;UBERON:0000203!2.36e-23!25;UBERON:0001869!5.23e-23!32;UBERON:0001893!1.25e-21!34;UBERON:0001017!4.05e-21!82;UBERON:0005743!4.60e-20!86;UBERON:0000073!5.27e-18!94;UBERON:0001016!5.27e-18!94;UBERON:0002780!7.72e-18!41;UBERON:0001890!7.72e-18!41;UBERON:0006240!7.72e-18!41;UBERON:0002791!1.18e-17!33;UBERON:0003080!2.13e-17!42;UBERON:0002020!3.99e-17!34;UBERON:0003528!3.99e-17!34;UBERON:0001049!1.34e-12!57;UBERON:0005068!1.34e-12!57;UBERON:0006241!1.34e-12!57;UBERON:0007135!1.34e-12!57;UBERON:0000955!1.64e-12!69;UBERON:0006238!1.64e-12!69;UBERON:0002616!3.86e-12!59;UBERON:0001871!1.04e-11!7;UBERON:0003056!1.04e-11!61;UBERON:0007190!3.63e-11!1;UBERON:0004121!3.38e-09!169;UBERON:0001872!5.95e-09!5;UBERON:0000924!6.14e-09!173;UBERON:0006601!6.14e-09!173;UBERON:0002021!6.19e-09!5;UBERON:0003075!5.30e-08!86;UBERON:0007284!5.30e-08!86;UBERON:0002346!1.35e-07!90;UBERON:0000200!1.98e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.54e-11;49!UBERON:0001950;4.11e-10;20!UBERON:0002619;2.74e-09;22!UBERON:0002114;8.31e-09;2!UBERON:0000956;2.75e-08;25!UBERON:0000203;2.75e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.49e-17,81;UBERON:0001016,4.27e-15,89;UBERON:0001950,4.17e-10,20;UBERON:0002619,2.78e-09,22;UBERON:0002114,8.31e-09,2;UBERON:0000956,2.79e-08,25;UBERON:0000203,2.79e-08,25;UBERON:0004121,7.35e-08,171;UBERON:0000924,7.35e-08,171;UBERON:0006601,7.35e-08,171;UBERON:0011216,1.33e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,5.41302168944387,4.18790663335872,3.82763250991898,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20323694771833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,8.29066311646717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@EXOC4 | |||
}} |
Revision as of 19:25, 22 January 2014
Short description: | p9@EXOC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EXOC4_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 24bp_to_ENST00000489931_5end |
EntrezGene: | EXOC4 |
HGNC: | 30389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.55e-44 | 8 |
neuron | 9.39e-34 | 6 |
neuroblast | 9.39e-34 | 6 |
electrically signaling cell | 9.39e-34 | 6 |
neural cell | 1.81e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.49e-17 | 81 |
nervous system | 4.27e-15 | 89 |
neocortex | 4.17e-10 | 20 |
regional part of cerebral cortex | 2.78e-09 | 22 |
duodenum | 8.31e-09 | 2 |
cerebral cortex | 2.79e-08 | 25 |
pallium | 2.79e-08 | 25 |
ectoderm-derived structure | 7.35e-08 | 171 |
ectoderm | 7.35e-08 | 171 |
presumptive ectoderm | 7.35e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |