FFCP PHASE1:Hg19::chr8:21645804..21645850,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4244 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000518077_5end | |||
|coexpression_cluster_id=C1759 | |||
|description=CAGE_peak_3_at_GFRA2_5end | |||
|id=chr8:21645804..21645850,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.40e-13;82 | |||
|ontology_enrichment_disease=DOID:171!4.14e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;9.21e-19;10!DOID:3095;6.23e-08;22!DOID:2994;6.23e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.42e-19,10;DOID:3095,6.00e-08,22;DOID:2994,6.00e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-60!115;UBERON:0001049!2.20e-42!57;UBERON:0005068!2.20e-42!57;UBERON:0006241!2.20e-42!57;UBERON:0007135!2.20e-42!57;UBERON:0002346!2.06e-39!90;UBERON:0000073!3.49e-36!94;UBERON:0001016!3.49e-36!94;UBERON:0001017!2.43e-35!82;UBERON:0005743!1.34e-34!86;UBERON:0003075!2.29e-34!86;UBERON:0007284!2.29e-34!86;UBERON:0002616!2.30e-34!59;UBERON:0001869!3.12e-33!32;UBERON:0002619!8.04e-33!22;UBERON:0001893!8.45e-33!34;UBERON:0002020!9.10e-33!34;UBERON:0003528!9.10e-33!34;UBERON:0000955!3.76e-32!69;UBERON:0006238!3.76e-32!69;UBERON:0002791!2.32e-31!33;UBERON:0002780!2.49e-31!41;UBERON:0001890!2.49e-31!41;UBERON:0006240!2.49e-31!41;UBERON:0000956!2.00e-30!25;UBERON:0000203!2.00e-30!25;UBERON:0001950!2.08e-30!20;UBERON:0003080!2.50e-30!42;UBERON:0003056!4.74e-23!61;UBERON:0000924!9.83e-22!173;UBERON:0006601!9.83e-22!173;UBERON:0000153!6.61e-20!129;UBERON:0007811!6.61e-20!129;UBERON:0004121!1.61e-18!169;UBERON:0000033!6.49e-18!123;UBERON:0003076!6.28e-13!15;UBERON:0003057!6.28e-13!15;UBERON:0000922!2.26e-12!612;UBERON:0001871!9.00e-12!7;UBERON:0000468!1.67e-10!659;UBERON:0000200!3.18e-10!6;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0004733!1.41e-09!12;UBERON:0002028!1.41e-09!12;UBERON:0007277!1.41e-09!12;UBERON:0000064!1.96e-09!219;UBERON:0000923!3.39e-09!604;UBERON:0005291!3.39e-09!604;UBERON:0006598!3.39e-09!604;UBERON:0002532!3.39e-09!604;UBERON:0000025!5.62e-09!194;UBERON:0000062!5.90e-09!511;UBERON:0002021!7.35e-09!5;UBERON:0001872!9.13e-09!5;UBERON:0004732!1.16e-08!13;UBERON:0000481!1.13e-07!347;UBERON:0000349!2.06e-07!5;UBERON:0000477!7.85e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.07e-67;22!UBERON:0001950;1.05e-66;20!UBERON:0000956;1.78e-58;25!UBERON:0000203;1.78e-58;25!UBERON:0001869;1.22e-48;32!UBERON:0001893;2.97e-44;34!UBERON:0002791;9.40e-44;32!UBERON:0003528;5.18e-41;34!UBERON:0002020;5.18e-41;34!UBERON:0002780;2.10e-28;41!UBERON:0001890;2.10e-28;41!UBERON:0000922;1.30e-22;49!UBERON:0000200;1.71e-22;6!UBERON:0002050;1.07e-19;5!UBERON:0005423;1.07e-19;5!UBERON:0002021;2.00e-19;5!UBERON:0001872;4.42e-19;5!UBERON:0001871;4.10e-18;6!UBERON:0000073;4.98e-18;53!UBERON:0002616;4.98e-18;53!UBERON:0002346;1.17e-16;4!UBERON:0000923;1.17e-16;4!UBERON:0010316;1.17e-16;4!UBERON:0005291;1.17e-16;4!UBERON:0001017;3.14e-16;75!UBERON:0000955;1.38e-15;68!UBERON:0001016;3.96e-14;83!UBERON:0001870;5.26e-12;3!UBERON:0002702;1.14e-08;2!UBERON:0011216;1.40e-08;132!UBERON:0002771;2.86e-08;2!UBERON:0000013;1.41e-07;5!UBERON:0002410;1.41e-07;5!UBERON:0000349;4.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.62e-67,22;UBERON:0001950,9.19e-67,20;UBERON:0000956,1.69e-58,25;UBERON:0000203,1.69e-58,25;UBERON:0001869,1.51e-54,32;UBERON:0001893,4.36e-51,34;UBERON:0002791,1.49e-49,32;UBERON:0003528,2.16e-46,34;UBERON:0002020,2.16e-46,34;UBERON:0002780,1.43e-41,41;UBERON:0001890,1.43e-41,41;UBERON:0003080,1.43e-41,41;UBERON:0006240,1.43e-41,41;UBERON:0001049,9.17e-35,56;UBERON:0005068,9.17e-35,56;UBERON:0006241,9.17e-35,56;UBERON:0007135,9.17e-35,56;UBERON:0001016,5.97e-34,89;UBERON:0002346,6.09e-34,86;UBERON:0000073,7.15e-34,53;UBERON:0002616,7.15e-34,53;UBERON:0000955,2.95e-32,68;UBERON:0006238,2.95e-32,68;UBERON:0003056,2.69e-31,61;UBERON:0001017,1.11e-30,81;UBERON:0003075,7.00e-26,82;UBERON:0007284,7.00e-26,82;UBERON:0004121,7.79e-24,171;UBERON:0000924,7.79e-24,171;UBERON:0006601,7.79e-24,171;UBERON:0000200,1.37e-22,6;UBERON:0010371,9.51e-21,104;UBERON:0002021,2.82e-19,5;UBERON:0001872,4.77e-19,5;UBERON:0001871,3.21e-18,6;UBERON:0011216,3.39e-18,223;UBERON:0010314,5.93e-15,132;UBERON:0007023,8.26e-13,114;UBERON:0001870,3.62e-12,3;UBERON:0002702,1.02e-08,2;UBERON:0002771,2.61e-08,2;UBERON:0000013,1.42e-07,5;UBERON:0002410,1.42e-07,5;UBERON:0000922,2.28e-07,592;UBERON:0000349,3.95e-07,5;UBERON:0005423,4.49e-07,581;UBERON:0002050,5.20e-07,564;UBERON:0000025,9.31e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,2.01523926815932,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0.425208599930087,0.419317291016752,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.464775771478074,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,1.40890433082986,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,2.41197055220813,3.99227596002388,0,0,0,0,0,0,0,4.37406920074882,0.694499979733169,0.885741385813839,0.120596438625408,1.52581736317083,0.221158519862449,0.295547618953547,1.97446857438575,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.202203398942031,2.40773294189637,0.234264445725339,0,0,0,0.789168805698781,2.41981432097328,1.22429104652196,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.775912131907355,0,0.90392296312213,0,0,2.91229661397042,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,2.38568906942791,0.544813624446302,0,0,0,0,0,2.36923270966296,0,0.0788057072991982,1.10154635083496,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.904980694530854,0.52893040697076,0,0,0.106787412567695,2.20086027139532,0.414239055347196,0.992332043623902,0,0,0,0,0,0.306345576763462,0,0,5.31640907980192,3.53876168215693,2.50381861413,0.573409195690071,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4520639573126,20.8101885995596,0,1.52893493468819,5.77090601843686,12.1167704457959,25.9025747301315,0.558644917973244,0,0,0,0,0,2.56916900385838,7.08482881627925,1.11743701340006,5.53814183450038,5.04143392443436,5.25595118728056,3.55246420390072,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,4.59255575405084,2.34323429584154,1.86018116851066,4.31227509318566,6.01672289920042,0,0.496211178389294,6.68310728566558,0,0,0.336283722218824,0,0,0.709618961301111,0,0,0.815636795721981,6.37995903559636,0,0,0,0.157115589916002,0,6.39211104356647,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,2.4285549652957,0,0,0,0,0.109940516745429,0,0.540219106755613,2.62271472604749,0,0.490296643507811,0,0.981542335574726,0.297046400327086,3.3812458206672,0,0.845855261818682,1.67590508731301,0,0,0,0,1.46067277649303,0,0,0,3.67154047030939,2.18175345170189,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0.829169439458779,0,0.213233981900981,1.90451545170992,0.0645889098360061,0.372448285775147,0,0.572824424503484,0.202117188958219,0.217716747896961,0,0.202056159043763,0.0717222053926763,2.66128285236811,0,0,0,0,0,0.244482888365733,1.62758471326295,0,0.603821380773079,0 | |||
|short_description=p3@GFRA2 | |||
}} |
Revision as of 20:59, 22 January 2014
Short description: | p3@GFRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFRA2_5end |
Coexpression cluster: | C1759_neuroectodermal_neuroblastoma_peripheral_occipital_postcentral_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000518077_5end |
EntrezGene: | GFRA2 |
HGNC: | 4244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.42e-19 | 10 |
germ cell and embryonal cancer | 6.00e-08 | 22 |
germ cell cancer | 6.00e-08 | 22 |