FFCP PHASE1:Hg19::chr8:81083731..81083813,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7163 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |||
|TSSclassifier=strong | |||
|UniProt=E5RFR7,E5RJ27,E5RGI1 | |||
|association_with_transcript=0bp_to_ENST00000379096,ENST00000521241,ENST00000521354,ENST00000523753_5end | |||
|description=CAGE_peak_1_at_TPD52_5end | |||
|id=chr8:81083731..81083813,- | |||
|ontology_enrichment_celltype=CL:0000066!5.11e-16!254;CL:0000945!1.21e-13!24;CL:0000826!1.21e-13!24;CL:0000542!8.00e-12!53;CL:0000051!8.00e-12!53;CL:0000838!2.41e-11!52;CL:0000236!3.85e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.30e-14;24!CL:0000236;6.96e-09;13!CL:0000542;1.20e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.08e-16,253;CL:0000945,7.16e-14,24;CL:0000826,7.16e-14,24;CL:0000542,5.12e-12,53;CL:0000051,5.12e-12,53;CL:0000838,1.58e-11,52;CL:0000236,2.77e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.54e-12;29!UBERON:0006595;8.37e-08;86!CL:0000051;1.20e-07;53!UBERON:0006601;2.52e-07;82!UBERON:0002532;8.88e-07;206!UBERON:0010316;8.88e-07;206 | |||
|ontology_enrichment_disease=DOID:305!1.68e-26!106;DOID:0050687!7.84e-25!143;DOID:162!9.52e-24!235;DOID:14566!8.88e-22!239;DOID:0050686!1.38e-08!137;DOID:0050615!8.92e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:305;2.16e-08;106!DOID:0050615;6.94e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.63e-27,106;DOID:0050687,1.53e-25,143;DOID:162,4.02e-25,235;DOID:14566,5.51e-23,239;DOID:0050686,2.16e-09,137;DOID:0050615,7.10e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-18!115;UBERON:0001049!4.55e-13!57;UBERON:0005068!4.55e-13!57;UBERON:0006241!4.55e-13!57;UBERON:0007135!4.55e-13!57;UBERON:0004921!4.27e-12!129;UBERON:0004185!4.27e-12!129;UBERON:0002780!1.03e-11!41;UBERON:0001890!1.03e-11!41;UBERON:0006240!1.03e-11!41;UBERON:0003080!1.96e-11!42;UBERON:0004119!3.67e-11!169;UBERON:0000925!3.67e-11!169;UBERON:0006595!3.67e-11!169;UBERON:0001041!1.78e-10!98;UBERON:0001007!2.30e-10!155;UBERON:0001555!2.30e-10!155;UBERON:0007026!2.30e-10!155;UBERON:0001893!4.82e-10!34;UBERON:0000077!5.74e-10!130;UBERON:0002020!7.43e-10!34;UBERON:0003528!7.43e-10!34;UBERON:0002616!1.27e-09!59;UBERON:0002791!1.33e-09!33;UBERON:0002346!1.54e-09!90;UBERON:0000955!2.18e-09!69;UBERON:0006238!2.18e-09!69;UBERON:0008947!2.99e-09!38;UBERON:0003258!2.99e-09!38;UBERON:0001869!3.13e-09!32;UBERON:0003075!4.66e-09!86;UBERON:0007284!4.66e-09!86;UBERON:0000065!7.67e-09!53;UBERON:0001017!1.09e-08!82;UBERON:0005743!1.45e-08!86;UBERON:0000064!2.00e-08!219;UBERON:0001004!2.63e-08!72;UBERON:0000073!3.16e-08!94;UBERON:0001016!3.16e-08!94;UBERON:0002619!6.56e-08!22;UBERON:0000072!7.80e-08!46;UBERON:0003056!1.24e-07!61;UBERON:0001950!3.11e-07!20;UBERON:0005177!4.27e-07!107;UBERON:0001737!7.55e-07!9;UBERON:0000956!8.97e-07!25;UBERON:0000203!8.97e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.51e-09;34!UBERON:0002780;7.91e-09;41!UBERON:0001890;7.91e-09;41!UBERON:0003528;1.29e-08;34!UBERON:0002020;1.29e-08;34!UBERON:0001869;1.78e-08;32!UBERON:0002791;1.80e-08;32!UBERON:0002619;5.07e-08;22!UBERON:0000073;6.70e-08;53!UBERON:0002616;6.70e-08;53!UBERON:0001950;2.48e-07;20!UBERON:0000072;4.80e-07;37!UBERON:0001737;5.94e-07;9!UBERON:0001557;5.94e-07;9!UBERON:0000065;6.51e-07;44!UBERON:0000956;7.02e-07;25!UBERON:0000203;7.02e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.07e-18,114;UBERON:0011216,7.30e-17,223;UBERON:0001049,2.37e-13,56;UBERON:0005068,2.37e-13,56;UBERON:0006241,2.37e-13,56;UBERON:0007135,2.37e-13,56;UBERON:0000073,7.34e-13,53;UBERON:0002616,7.34e-13,53;UBERON:0002780,6.65e-12,41;UBERON:0001890,6.65e-12,41;UBERON:0003080,6.65e-12,41;UBERON:0006240,6.65e-12,41;UBERON:0004921,1.47e-11,118;UBERON:0001893,3.33e-10,34;UBERON:0003528,5.18e-10,34;UBERON:0002020,5.18e-10,34;UBERON:0001041,5.84e-10,87;UBERON:0000955,7.07e-10,68;UBERON:0006238,7.07e-10,68;UBERON:0004119,8.48e-10,160;UBERON:0000925,8.48e-10,160;UBERON:0006595,8.48e-10,160;UBERON:0008947,1.44e-09,38;UBERON:0003258,1.44e-09,38;UBERON:0001007,1.88e-09,145;UBERON:0001555,1.88e-09,145;UBERON:0007026,1.88e-09,145;UBERON:0001869,2.24e-09,32;UBERON:0002791,2.38e-09,32;UBERON:0001017,3.58e-09,81;UBERON:0001016,6.28e-09,89;UBERON:0002346,7.37e-09,86;UBERON:0000065,1.57e-08,54;UBERON:0003056,1.68e-08,61;UBERON:0003075,2.24e-08,82;UBERON:0007284,2.24e-08,82;UBERON:0010371,2.40e-08,104;UBERON:0005177,3.76e-08,101;UBERON:0002619,4.98e-08,22;UBERON:0001004,1.30e-07,74;UBERON:0000072,1.65e-07,47;UBERON:0001950,2.43e-07,20;UBERON:0001737,5.99e-07,9;UBERON:0000956,7.14e-07,25;UBERON:0000203,7.14e-07,25 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0,0,32.4368796181992,41.8680700783457,4.58726881473362,6.85794143393979,0,0,0.672325146451775,0,0,0,1.60057375499824,0.612002073732759,2.5076377718247,4.29353980696585,5.74872585306114,6.02604670055053,62.2005122788323,62.3143473925088,63.3621789575118,4.72037132218685,5.75744097145819,5.72819656269481,20.2272669385364,12.3494426699083,25.1432726913416,96.2917303213149,89.5666164670756,13.7992206487378,4.43196326825502,1.80490002723128,3.47217393145363,2.01523926815932,7.12566065241755,2.31818010870768,0.436194716338694,0.377875943688809,0.242584061187816,0,0.411167888021826,0.619412741790207,0.28769239232215,0.512321413058201,0,0,0.645484683583826,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,1.13477044938228,0,0,0,0.217188844705117,5.44859552370032,0,0.632924774881769,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0,0.182664153764634,110.877634010633,109.773860863688,87.1719068786284,89.1866165164,108.507312486759,109.202963591352,120.97121171963,120.210773071456,101.319908501482,55.7875329902392,87.9228424688026,25.1125524300149,27.4649195860953,21.3341108667812,18.884137930928,13.7553766962208,16.4481199199607,10.0311897234407,8.79990119910694,8.04861269749047,1.94826728407911,15.7088744208095,12.668054021418,10.4120930454302,5.1452734115353,11.0158534964081,10.0145697621106,13.4839081775014,9.119550586933,8.98389565778663,13.3457906845854,10.7016331235885,5.22677619024884,17.5629481181228,23.3764501097172,14.0887252647878,13.4100436770337,15.6097053018807,10.4173352617027,10.4549724889321,20.4782161945771,21.8857105074055,8.74515085866421,8.76075832562862,15.6014319414999,27.0153035921141,17.1161725301445,18.3926992931155,0,0,3.32442660793179,0,0.50133791063589,1.73815822752988,2.3858578411533,2.43317435151318,4.34860158954712,3.76939975686359,8.87131335500573,23.4452545140906,36.4295288292542,34.1121687361675,11.3591587779139,11.8408221363502,10.2377629599526,10.7320780937404,16.0158575018436,11.1437250398869,4.77029777680092,0.860234595106124,2.42998351125316,0,1.67799774483962,0,0.208994966536811,6.20200222006389,7.1153252537342,4.35136796594071,8.05658634218294,9.88353737434066,9.76248230192678,11.0298924103761,0,14.7344551668732,20.6567022816076,19.3691746431314,3.06633274931766,0.949265659568129,3.11442964681692,0,0,44.045499266396,0,0,0,0,1.77334191099179,1.68203280042692,0,7.4000264525148,1.55605517699883,0.269421344139376,0,1.36221684880438,0,0,0,0,0,0.23486899728753,0,0.421352420106746,0.408308342509787,0.61417158655884,0,0,0,0,0.718618141816238,1.68336113954066,0.500474079487857,1.10825646193673,0,0,0,0.794025282120147,0,0,0.423863802319124,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,1.01736355386293,21.2586938479627,18.8194823207676,19.5027124864523,34.1526377162867,31.674614628835,46.3613832049378,28.0921459091654,26.9983310436922,21.8986415445498,0,0.643240938192885,0,0,0,91.687770030879,89.8556398116282,81.7027391305004,86.2498866767321,101.531820947061,91.5864589768833,85.0785554490637,86.1412231900269,86.1833631559914,0.738155454624648,0,1.6462960453256,0,31.6887587054577,29.4848165003288,41.3552934676983,43.2633837426358,27.6723986722006,10.4656364282101,27.6570719229736,8.99214026060957,42.4232263577082,21.850873057413,0,0,4.3299402607582,17.5054911512366,6.80970426567766,5.34155856715973,6.01881166349594,11.4152491340759,34.7689935102081,22.3206402144667,2.46217006087397,6.31811515875942,6.53977114070404,17.8094284574876,8.39910640994298,15.5952606966625,14.77715624597,30.516563543966,32.587527729043,0,0.352193736052904,1.4512968087854,0.288239906833923,1.13618190083742,5.39732101483437,4.20187268114105,3.51652341630141,3.4214489204541,7.50640696734262,4.20480280981484,1.14330573052231,0.336393253036082,0.87192013766656,0.80672114403045,0.258543431515556,0,0,1.06375246633948,3.12022310734098,0.771622122786426,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,1.64648067356154,0.65147236858747,0,0.791951872933429,5.72734816413214,0,8.59767724165691,0,3.01354254859276,2.10833939483032,0,0,0,4.77778312003011,4.52047909610843,3.76028022803781,16.4765161670485,25.2199373058467,12.7220269167115,15.5295073898496,0,3.90419561572865,3.09315525111078,2.68026024534958,1.91381625495949,0,0,0,0,0,0,1.24782516918484,0.892144943985809,2.99634588564476,4.91993942969395,0,0,0,0,0.368738337083406,0,0.195801157462741,0,17.7820502465683,6.68714022537712,17.6100470375683,0.606255142892519,3.32870879020994,0.30239029332968,0,0.306923946576125,0.280660094433074,0.768834895534206,0.511707249066704,2.2519548960105,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0,17.5246201907852,39.0987617091405,51.6574347930378,3.09999010044438,0,1.31124414959424,35.1935698067781,43.7447114753076,23.5304930753057,14.6139224653261,25.8601490787545,6.8240030442538,6.63365450578411,6.0456456508599,7.71136263451447,14.6311076273681,14.0473136679359,46.1326054211519,51.5267125535809,22.8352249816622,1.97333888981341,0.784306353074702,17.6950586330309,14.4326444107871,10.4121086292577,32.0457546224416,11.720891496748,10.7262349896764,12.6338418359158,9.1008434445113,1.6068392984416,0.386682873168488,0.462145851343933,1.22802939780904,0.964856007391714,0.107420244868274,0.435050081742686,0.596586391912706,0.890320356467374,37.850245617664,37.0926830014655,18.7590687367039,66.6629775838074,0,0,0,0,0,0,0,0.715624433709956,1.48863347743867,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0,0.48763373908959,0,0,3.13949796238367,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,4.3375289733965,6.19730325570931,5.30622003154991,1.67023369722306,1.426684205925,3.90237170477658,0,0,0,0,20.3990878978086,11.3951386841084,16.3336477291984,27.3958460260427,25.3998169876026,37.0637246468776,29.7098202869573,41.1204886370457,11.6712950123399,12.9988325214204,6.26611905891579,17.1526878329608,13.9863172849306,12.3209929126616,14.5808488054291,11.1037524681198,5.02073134299124,46.1990330526412,26.9544237579135,83.239822456322,32.4605729197001,54.3523683181884,59.4659997278507,2.79411120005943,4.5961288831768,18.2039281142539,2.27235358192189,11.7934814807653,13.9223154210247,11.5943122872037,30.0761372508081,0,21.8399782141031,24.4177645701168,43.010470006723,13.3967084454748,25.8082242019105,23.4859913287037,27.363259240753,0,0,0,27.8569348830263,0,80.3625929000742,81.9675566988003,4.9812780952444,80.5833864416769,51.9326170733049,26.14052550619,72.8170678449954,26.4298565941048,77.7116576311057,39.7659059106519,63.7232456339623,3.67318726575589,28.5110702412294,15.4121547933435,14.1466071658259,58.8484740081345,91.7035202189565,0,50.9571094608828,0,33.4310266268056,17.5440751182097,20.4628948090749,27.9160837952522,7.18449277040819,0,32.9573133672374,68.3700883452844,9.98068990005971,59.6379572885184,54.8374199976147,8.69999490521752,45.7449662107709,70.4282611310963,29.548460220992,47.9193288805636,57.4461088365011,18.404249462929,29.2294657318567,51.3740828544238,42.7228861687833,51.9722521676756,33.6924285607044,83.1470655213556,45.7541546779759,51.307937894526,15.3131014422556,8.20382802098409,67.7857878900897,36.9801494968261,59.3214650694164,39.2371426470261,14.1976269772887,38.3785038733417,36.7895873504651,32.9658538429552,10.9699710054103,0.225595660617181,0.19606253431774,0.335643173951685,0,22.7279307941942,41.7776167765494,37.8700114929223,24.0300221437699,41.1138415509973,52.7488823471608,48.2978302188232,43.994170435221,5.04085918757057,7.78452815362968,6.89184866736005,54.9993245122325,6.42062117839031,63.7199292372922,51.8171601372491,40.8939053568067,18.208528465057,24.8588173795116,35.0873076541125,7.95789180239274,6.19228480359182,9.92134568135651,24.1593485955586,31.9033858899449,17.2115817055259,29.5096943302792,29.8681074432397,25.6148591426813,0.138674673013139,37.3153437420531,42.9206700674974,50.8425766429551,21.8408335302538,28.0337232928735,42.1857604420411,38.2988021531612,42.2073449253495,50.0463325080244,13.6796996371825,19.8863051886869,14.2523601632621,21.6598926756259,66.1597817738932,86.0426084033133,40.400045406773,30.5237782477274,21.9790570540343,33.1407959454444,33.6737592727792,196.476272551949,18.0068497485187,53.1800852220051,31.5830006386506,20.7933435292629,16.945661102598,3.36594118199862,0,49.2344636742027,54.0776246623373,38.3239764200917,10.7441360354989,7.62373327410012,6.42349522926185,11.6871816245959,2.15361907373044,38.5380470963053,8.15529491459485,10.9354014146518,13.4366944973453,0,90.866840631414,23.0834724160165,24.8071733727311,20.423273787818,71.1630691351634,73.073085572772,48.5090110783675,47.3987853268283,19.6118841127323,21.5936915457657,17.0330538591966,17.098015757914,22.4402566821805,58.4410735050197,19.4552118807574,44.919253160543,32.1546625267538,33.5809070131713,41.9532374038857,48.5545449218197,10.7204298956005,5.29673576292345,36.8689379599387,0.542999601753713,2.5926644736038,0.326587360109409,29.9325478906219,15.5154864216251,0,4.75910784384528,38.3966852236576,18.550964447711,43.1805074247579,50.3806212639649,71.3432113977654,54.9755717407004,24.6678923031375,22.0086027139532,17.3980403245822,22.3274709815378,56.3193150909141,32.5186237676992,46.5989118172233,3.26410682021684,2.0055191521816,2.45076461410769,1.31149052283922,71.3025596976064,53.1640907980192,45.5157968084323,77.6183770380299,32.6843241543341,39.2688842440457,43.6537712677926,177.501298623184,29.4953762790572,25.4770517469968,33.6849093583062,23.7618477895153,97.8819953136383,130.139083692521,0,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0,0.228840068396924,0.453692771289717,0.310874401165561,0,2.70804504178294,0,5.27894053379282,0,1.06336685823198,1.04349012362347,7.66313805885814,7.23529903120711,7.73054393088857,0,7.4113284359317,0,2.78667122089031,2.00013882331577,0,0,0,135.796980437149,6.86213092399762,3.65392008751296,24.4842399553254,32.4131464053368,33.0394551083731,10.0289751005633,13.5872636750828,17.7620080158753,43.9955973405244,12.3464984493385,9.46077667657207,15.8869741524527,15.1989350361727,11.5466783347405,74.7978139580863,24.1626782960842,18.4682128035575,31.4045556971221,88.4546591885314,29.9842948679538,86.6379705770371,9.3994076051817,28.0599249095591,119.000550945624,40.2936327032454,0,45.6007195165389,31.7259402616816,25.5788742607303,14.3406999157587,22.1744978016814,30.4694890555719,15.6153927557703,15.5179691674228,28.0094827225345,82.1208029420668,0,36.0398174655728,100.071343535684,0,0,59.540491664418,29.7562810283728,66.8865869449464,43.8949019475216,6.30179240554295,52.2137256104845,71.6951866605419,65.673933319211,61.9312103741472,50.4910415928329,13.0234304950392,34.7732255112518,0,66.9649128278298,11.3382246606277,5.18951265609875,33.6847464734878,71.8992890334445,35.8812171439549,23.5831561214539,28.5362246398897,63.0801040335806,50.7700764099001,70.0668240139014,63.0987311429373,5.4697480901822,137.612699481153,12.9014906381217,67.8863003228136,24.6581485344419,14.999651404592,16.1416186665036,37.0249018584345,55.094250307014,40.9804950151391,53.9295061761047,10.6322565851199,48.7342985443883,56.235721396236,65.8339693723703,106.782145816386,35.9498365255354,56.5616123697607,108.465327202436,38.3526662613988,13.3875106555545,45.3864103492698,12.3654421425615,26.0722459358999,22.2021122453119,1.91244099532837,0.801711364730253,4.55875561158681,5.63370974410035,31.1066847816341,111.428885934452,0,0,22.4395136601192,24.2853280656693,10.8572234982512,11.4664672677292,21.1406766097827,39.7508446141734,27.1876972710461,4.53200186031526,3.18254701254366,4.6392577253528,11.1713528403602,86.5576014809791,84.7530302187429,56.9627234824553,94.4229245845706,77.5080643055275,249.390617572145,100.63510217276,31.4725767125699,101.118218717727,12.992861052957,106.054446195732,34.1576732780005,43.9628672484087,17.3288848309194,0.169927114687817,29.8868859175934,17.2747139769187,37.8776980955481,52.137750072852,17.9976384575003,21.5849276393863,59.1572474479679,80.7363538791992,57.9091915931863,3.47097436825006,53.2373368194862,7.85431242612679,51.3156035299938,0,0.462175628631418,0.432626562123789,21.1959593722933,31.577750297508,0,102.39678506095,21.3773924212448,104.760185469723,32.8426876473011,6.74430414142331,5.35928260312357,58.0418607621146,52.8542608854285,28.7865875566324,22.1399921261279,11.4968259508091,13.8426612879763,22.0899769283808,62.9470395371051,49.1144769168473,24.1665590165627,24.9830309792255,62.368001091508,50.3489881856588,26.6128285236811,18.8041550491351,38.5285718618553,0,53.4459952534192,28.1569130884145,11.1239714206408,21.5654974507341,19.3069464513799,20.9324745334667,42.63560947633 | |||
|short_description=p1@TPD52 | |||
}} |
Revision as of 22:39, 22 January 2014
Short description: | p1@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPD52_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379096, ENST00000521241, ENST00000521354, ENST00000523753_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | E5RFR7E5RJ27E5RGI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.08e-16 | 253 |
lymphocyte of B lineage | 7.16e-14 | 24 |
pro-B cell | 7.16e-14 | 24 |
lymphocyte | 5.12e-12 | 53 |
common lymphoid progenitor | 5.12e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.58e-11 | 52 |
B cell | 2.77e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.63e-27 | 106 |
cell type cancer | 1.53e-25 | 143 |
cancer | 4.02e-25 | 235 |
disease of cellular proliferation | 5.51e-23 | 239 |
organ system cancer | 2.16e-09 | 137 |
respiratory system cancer | 7.10e-07 | 16 |