FFCP PHASE1:Hg19::chr8:97506033..97506048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6383 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10659 | |||
|TSSclassifier=strong | |||
|UniProt=E7ESK6,Q6PIS6,F5H0S6 | |||
|association_with_transcript=0bp_to_ENST00000518385,ENST00000519587,ENST00000520233,ENST00000545117,ENST00000546193_5end | |||
|coexpression_cluster_id=C4784 | |||
|description=CAGE_peak_1_at_SDC2_5end | |||
|id=chr8:97506033..97506048,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-13!180;CL:0000057!6.27e-10!75;CL:0000136!9.32e-09!15;CL:0002620!5.59e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.98e-08;13!CL:0002620;5.39e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.02e-10,76;CL:0000136,8.37e-09,15;CL:0002620,5.16e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.38e-16!659;UBERON:0000062!8.81e-15!511;UBERON:0000467!2.72e-12!625;UBERON:0000480!5.49e-12!626;UBERON:0000475!1.90e-10!365;UBERON:0000922!6.17e-09!612;UBERON:0000479!1.48e-08!787;UBERON:0002050!1.71e-08!605;UBERON:0005423!1.71e-08!605;UBERON:0000923!2.62e-08!604;UBERON:0005291!2.62e-08!604;UBERON:0006598!2.62e-08!604;UBERON:0002532!2.62e-08!604;UBERON:0005743!7.75e-08!86;UBERON:0001017!4.59e-07!82;UBERON:0007023!5.11e-07!115;UBERON:0000481!7.57e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000479,2.07e-10,773;UBERON:0000922,5.48e-08,592;UBERON:0010314,7.52e-08,132;UBERON:0005423,1.32e-07,581;UBERON:0007023,4.95e-07,114;UBERON:0001017,6.70e-07,81;UBERON:0000923,8.74e-07,560;UBERON:0010316,8.74e-07,560;UBERON:0005291,8.74e-07,560;UBERON:0006598,8.74e-07,560;UBERON:0010317,8.74e-07,560;UBERON:0002532,8.74e-07,560 | |||
|phase1_expression=145.342703416445,120.538594950624,134.188592699365,163.119476315603,109.505468134686,188.42512120568,68.3909671054438,104.865498988854,114.660490779729,13.515366507583,12.5604210235037,17.2568683982836,15.2984847372503,37.0061395350539,28.5001743126008,16.8081286612944,21.6970030088632,19.7183724404591,14.6379839637152,70.3021241618459,48.9601658986207,63.0043990170957,103.903663328574,73.7753151142846,143.871864975644,0.0764134057479513,0.0821005894499457,0.236132343941038,9.4407426443737,8.82807615623589,23.9964991139918,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,21.6058209327432,24.2658781438871,14.7567392086779,10.0761963407966,12.6318529747402,8.75756929956234,34.8955773070955,8.69114670484262,6.54976965207104,53.9235365621188,11.5127008646111,10.8397229813286,31.3584707631144,3.33008918487831,5.67557351732605,69.6386275087969,12.9096936716765,10.8341189275473,47.625311904279,9.00590295190891,8.7642158933583,63.6654496131477,14.1208771913481,12.7867425159808,28.3672118160576,1.59570926097305,3.83602275479425,59.7831031574883,6.24123747160254,3.73693349397345,34.4210671401738,3.65038042894141,5.64690996233303,46.6157617027694,11.4166067156145,7.59509729858123,2.11255286311942,4.03948169933583,0.838634582033504,11.345191745796,13.3657434628941,3.05378614724452,0.855038231223746,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,0,25.2228853341691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,12.1903433156981,4.69490601792545,50.2499868045074,215.417734821201,343.416468785584,142.38412813849,269.601936050323,139.177572906554,43.2969462611431,54.1019729808656,49.5388191309231,34.8404340823916,0,0,337.853836794525,359.752037260286,377.999481755134,0.953962497221368,1.14398982156026,0.371457501329565,0,2.58070378531837,0.347140501607594,0.56530794192401,0,0.825354125820202,0.835979866147242,4.13466814670926,6.04802646567407,13.7235451233515,3.22263453687318,8.36299316290364,2.19655851793353,3.30896772311282,8.1014194788176,1.42879565254528,1.57170560838319,0.337834441449967,0,0,0.916008719652036,31.6273001846552,31.022421131866,0.436094052142534,140.643062329775,44.1940485709383,12.4464629964426,46.7543691820566,17.7334191099179,39.8081096101038,42.699598291882,60.9268844590385,28.6314152567785,12.2586711583416,8.82694276812677,106.404271634387,69.1411109375999,20.1516431377065,28.7187270683895,15.9732110032446,36.1665806935359,13.2700983467454,20.2341180460164,23.8766371393822,19.19049209796,3.31652656741774,33.5808788821238,108.108260012667,97.67043706503,20.0235499626366,10.0606539854273,10.6051751791062,12.7620890269403,12.7449493122724,74.6261955497424,78.7673635203481,109.072830766189,25.5222412110047,166.294192283575,245.163882363715,91.3426493997712,130.839717892799,73.6825584054838,154.841964567423,183.511220342948,125.569591187502,80.3855292579889,80.0215064353843,111.104227661255,78.236691500305,201.29043895692,107.300984612437,85.7976597091067,0.773043412653187,0.272746120590835,0,9.02605425359006,10.2047921607544,12.4327518870385,21.2505162781509,13.8776467981596,8.02950189966826,86.0472427813988,104.205031987247,53.8726193274674,39.4712738827182,25.2657818584355,31.2329952105188,36.9200471271043,20.003915480329,27.7940811285633,36.3858671634318,21.1170851008876,30.2022130278768,25.7050119314203,15.774633434802,1.4763109092493,44.8773676171027,24.694440679884,14.7008711385542,160.978894223725,154.303873018387,128.792199656546,0,44.0298609984346,78.2349214961277,3.73150970389327,0,0.703702806881416,2.68506490959736,14.6613737389646,15.5990217791937,33.1962086658129,75.7025544487252,119.287233343595,13.714812537302,12.9635943521451,8.75169100279152,3.1608175918371,1.71697232418975,123.600937055873,379.554918055844,197.53081468172,2.81201501960331,3.19166043577833,1.98485136139341,7.16468181622786,3.77824120068151,2.30029607499127,0.492663237895943,0,3.10992173311158,0.864719720501769,1.38866676769018,5.84180627487955,5.34783795781589,2.34434894420094,15.3965201420435,6.27247705490273,0.600686115687835,7.43148724839503,96.8812568743917,60.5984495678259,141.616229920254,26.3714300145867,32.1890801266694,59.17119267892,49.9963659179557,16.6411899058186,11.0599170932721,2.83698264046557,11.1897315186762,29.1675107062621,27.6737018749636,4.11620168390384,48.2089552754728,28.7867478481462,5.543663110534,13.866211344741,20.0452695478068,13.8962457743059,43.7845610308286,29.6331683944955,90.6585939777036,569.348656648,545.594195212041,17.1164286048862,28.0875734935104,3.6985738059069,9.84835297819426,0,0.985153801009636,0,0.385029108839245,99.6050926952057,22.1237751557957,38.6644406388848,25.1274398001523,35.7245700925771,17.9761685747324,5.9832291840805,7.87389475528467,44.1689370188904,24.5083555319242,33.3655979150675,100.865867842441,66.0187258549498,72.7008133306439,37.1338285526901,78.8478781286624,43.2074257706371,34.1461135265266,132.180894108552,52.72958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| |||
|short_description=p1@SDC2 | |||
}} |
Revision as of 22:58, 22 January 2014
Short description: | p1@SDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDC2_5end |
Coexpression cluster: | C4784_medulloblastoma_Multipotent_osteoclastoma_mesodermal_Dendritic_Macrophage_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000518385, ENST00000519587, ENST00000520233, ENST00000545117, ENST00000546193_5end |
EntrezGene: | SDC2 |
HGNC: | 10659 |
UniProt: | E7ESK6Q6PIS6F5H0S6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.02e-10 | 76 |
fat cell | 8.37e-09 | 15 |
skin fibroblast | 5.16e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
tissue | 2.07e-10 | 773 |
embryo | 5.48e-08 | 592 |
structure with developmental contribution from neural crest | 7.52e-08 | 132 |
developing anatomical structure | 1.32e-07 | 581 |
adult organism | 4.95e-07 | 114 |
central nervous system | 6.70e-07 | 81 |
germ layer | 8.74e-07 | 560 |
germ layer / neural crest | 8.74e-07 | 560 |
embryonic tissue | 8.74e-07 | 560 |
presumptive structure | 8.74e-07 | 560 |
germ layer / neural crest derived structure | 8.74e-07 | 560 |
epiblast (generic) | 8.74e-07 | 560 |