FFCP PHASE1:Hg19::chr8:117886814..117886833,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |||
|TSSclassifier=strong | |||
|UniProt=E5RFV8 | |||
|association_with_transcript=-47bp_to_ENST00000517485_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_5_at_RAD21_5end | |||
|id=chr8:117886814..117886833,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.24e-09;3!CL:0002615;1.88e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,8.98e-10,3;CL:0002615,1.79e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.03e-16!235;DOID:14566!1.07e-16!239;DOID:2531!3.60e-10!51;DOID:0060083!3.60e-10!51;DOID:1240!7.35e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.89e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.40e-10,51;DOID:0060083,1.40e-10,51;DOID:1240,3.30e-08,39;DOID:14566,6.98e-08,239;DOID:162,1.23e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.09e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.53e-18;9!UBERON:0001557;2.53e-18;9!UBERON:0003688;2.23e-17;6!UBERON:0002358;2.23e-17;6!UBERON:0003684;2.23e-17;6!UBERON:0001178;2.23e-17;6!UBERON:0004457;2.55e-11;9!UBERON:0000042;2.55e-11;9!UBERON:0005406;4.63e-07;2!UBERON:0002331;9.72e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.43e-18,9;UBERON:0003688,1.54e-17,6;UBERON:0002358,1.54e-17,6;UBERON:0003684,1.54e-17,6;UBERON:0001178,1.54e-17,6;UBERON:0001557,1.46e-15,19;UBERON:0004457,2.30e-08,12;UBERON:0000042,2.30e-08,12;UBERON:0002370,4.26e-07,4;UBERON:0005058,4.26e-07,4;UBERON:0009113,4.26e-07,4;UBERON:0003295,4.26e-07,4;UBERON:0005562,4.26e-07,4;UBERON:0005406,4.26e-07,2;UBERON:0002331,9.52e-07,10;UBERON:0000358,9.52e-07,10;UBERON:0000307,9.52e-07,10;UBERON:0000091,9.52e-07,10;UBERON:0000087,9.52e-07,10;UBERON:0007010,9.52e-07,10;UBERON:0007806,9.52e-07,10;UBERON:0008780,9.52e-07,10;UBERON:0005728,9.52e-07,10 | |||
|phase1_expression=0,0,4.08767771878316,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.502170558379211,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,1.39440961044543,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.31692042387539,0,0,0,0.167186495390678,0,0,0,1.55974639639243,0,0.221533894583621,0,1.15282187753108,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,1.04535523804977,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,1.14734648299525,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0.309157587715317,0.257640540045629,0,0.843881661206331,1.94874010322397,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.806016785821122,1.18692414617341,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.725627385107593,1.00928340350251,0.72995471815166,0,0,0,0,0,2.48444280083672,2.36018566109342,1.44606617930089,1.32352767278873,1.52515610864684,0.237270619111097,2.29213223872279,1.76599318612811,1.15424147083917,0,0,0,0,0,0,0,5.29755719297581,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0,7.8826118063351,1.05658120815871,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0.87192013766656,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,1.08524321078289,4.93944202068461,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,8.18221551152749,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0.306923946576125,0.561320188866147,3.33161788064823,2.55853624533352,2.89537058058494,4.45254199334973,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.918515585316854,0.364182336013434,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.577566499444116,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.689182862422653,0.214840489736547,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0,0.632758849437452,0,0,0.42793898803392,0.318203247925937,0,0,0.823611089208164,0.235624804691373,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,1.30062222588003,0.577076851905779,14.8686452598185,14.348364545594,7.58401611444703,0.191505370132367,0.211673582723883,0.324621940274555,0.561594356226918,1.14117339516596,0,2.50634477090067,0.338583555603207,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0.36408156524854,2.22886768554957,0.568272293612826,0,0.296964680832639,0,0,0,0,0.659215496907038,41.1694545849587,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.709163045303809,0,0.583209226766509,0.694499979733169,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0,0.108647371922008,0,0.183195186803725,0,3.06579894587209,5.49430897382587,0.166211681900156,0,0.392125068635479,0.335643173951685,0,0.476809736941136,0,0,0,0,0,0,0.611030144933625,0.296521128680622,1.35920332841153,0.730953646538188,0,0,0,0.547364367646998,0.19566461893209,0,0,0,0,0.063186579628488,0.60129367765797,0.933193722575224,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0.51595809741485,1.54810130062536,2.26576882967175,1.64230914106418,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0.144090417154106,2.74887830798198,0.343189995723929,0.14405479798815,0.124252535565433,0,0.271808412147228,0.209205692624666,1.22397861163586,0,0,0.136905378891993,0,0,2.10309883423452,0,0,0,0,0,0,0.134366944973453,0,0,0.315132729228895,0.247247575143499,0.337017719270924,0.0984274815147488,0.338693328263138,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0,0.316801009558219,0,0,0.714695326373367,0,0,1.08599920350743,0,0.326587360109409,0,1.97022049798414,0.170388021785422,0.566560457600628,0,1.32506888912221,0,0.26446520348538,0,0,0,0.314408610199332,0.414239055347196,0.496166021811951,0.197611631897944,0.365377795142688,0,0,0.2506898940227,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0.0620964029413835,0.691743174681154,0,0.151649117541648,0,0.235265819698172,1.87333962322753,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0.673498977531838,1.26184898228651,0,3.00218227924896,0,0.453411851024545,0.463044948647668,1.46842022703881,0.179088841081487,4.94082315457555,2.85069264452319,0.883445729729405,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0.106691729694141,1.20550485762571,0,0.184105950251841,0,0,1.40683808434017,1.1860729253635,0.157265941855896,0.218419276384028,0.678930119816101,0,0.991486114072017,0,0.318004350653419,2.76016107504387,0,0,0,0.0642292250964595,0,0,0,0,0.207471757392654,0,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,1.52552838186867,0,6.56423532983707,0,0.20170506870352,0,0,0.163771917510097,0,0.135075169236789,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0.576169937778896,0.342976018874837,0.135939465953663,0,0.236387681767936,0.444925607568277,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.94808167039636,0.348724276104376,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0.485710993059139,0,0.397901550322736,2.02164154321867,0.79062257427272,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0.128915775947154,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0.506794004045748,0.305966489225945,0,0.18378979906969,0.250707539292375,0.303114792872958,0,0,0,0,0,2.26061184426021,1.30356900021302,1.00918676322552,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0.407016343054873,0.106727345877715,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p5@RAD21 | |||
}} |
Revision as of 23:28, 22 January 2014
Short description: | p5@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAD21_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -47bp_to_ENST00000517485_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | E5RFV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 8.98e-10 | 3 |
adipocyte of omentum tissue | 1.79e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.43e-18 | 9 |
omentum | 1.54e-17 | 6 |
peritoneum | 1.54e-17 | 6 |
abdominal cavity | 1.54e-17 | 6 |
visceral peritoneum | 1.54e-17 | 6 |
upper respiratory tract | 1.46e-15 | 19 |
cavity lining | 2.30e-08 | 12 |
serous membrane | 2.30e-08 | 12 |
thymus | 4.26e-07 | 4 |
hemolymphoid system gland | 4.26e-07 | 4 |
thymic region | 4.26e-07 | 4 |
pharyngeal gland | 4.26e-07 | 4 |
thymus primordium | 4.26e-07 | 4 |
perirenal fat | 4.26e-07 | 2 |
umbilical cord | 9.52e-07 | 10 |
blastocyst | 9.52e-07 | 10 |
blastula | 9.52e-07 | 10 |
bilaminar disc | 9.52e-07 | 10 |
inner cell mass | 9.52e-07 | 10 |
cleaving embryo | 9.52e-07 | 10 |
connecting stalk | 9.52e-07 | 10 |
inner cell mass derived epiblast | 9.52e-07 | 10 |
extraembryonic mesoderm | 9.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.40e-10 | 51 |
immune system cancer | 1.40e-10 | 51 |
leukemia | 3.30e-08 | 39 |
disease of cellular proliferation | 6.98e-08 | 239 |
cancer | 1.23e-07 | 235 |