FFCP PHASE1:Hg19::chr8:121824235..121824275,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11168 | |||
|TSSclassifier=strong | |||
|UniProt=Q13884 | |||
|association_with_transcript=33bp_to_NM_021021,uc003ype.2,uc010mdg.2_5end | |||
|coexpression_cluster_id=C4724 | |||
|description=CAGE_peak_1_at_SNTB1_5end | |||
|id=chr8:121824235..121824275,- | |||
|ontology_enrichment_celltype=CL:0002320!3.44e-29!365;CL:0000134!1.35e-26!358;CL:0000048!9.24e-22!430;CL:0000219!3.29e-20!390;CL:0002057!4.78e-20!42;CL:0002194!5.99e-20!63;CL:0000576!5.99e-20!63;CL:0000040!5.99e-20!63;CL:0000559!5.99e-20!63;CL:0000034!1.09e-19!444;CL:0000723!1.66e-19!436;CL:0000766!3.13e-18!76;CL:0002009!4.34e-18!65;CL:0000763!5.16e-17!112;CL:0000049!5.16e-17!112;CL:0000860!8.94e-17!45;CL:0000839!3.14e-16!70;CL:0000557!9.46e-15!71;CL:0000037!9.85e-15!172;CL:0000566!9.85e-15!172;CL:0002087!1.59e-14!119;CL:0000988!4.39e-14!182;CL:0002032!6.35e-14!165;CL:0000837!6.35e-14!165;CL:0000738!1.41e-11!140;CL:0002031!1.73e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.01e-16;39!CL:0000234;1.01e-16;39!CL:0000860;7.14e-16;33!CL:0002057;7.14e-16;33!CL:0000576;1.70e-15;48!CL:0000766;4.32e-11;69!CL:0000763;3.02e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.22e-31,361;CL:0000134,7.33e-29,354;CL:0000473,5.99e-25,48;CL:0000234,5.99e-25,48;CL:0002194,1.41e-23,59;CL:0000576,1.41e-23,59;CL:0000040,1.41e-23,59;CL:0000559,1.41e-23,59;CL:0000048,6.04e-23,427;CL:0000219,7.24e-22,386;CL:0000766,7.30e-22,72;CL:0002009,9.97e-22,61;CL:0000723,4.16e-21,433;CL:0000860,4.32e-21,42;CL:0002057,4.32e-21,42;CL:0000763,4.75e-21,108;CL:0000049,4.75e-21,108;CL:0000034,8.68e-21,441;CL:0000839,1.10e-19,66;CL:0000557,3.04e-18,67;CL:0000037,1.87e-16,168;CL:0000988,6.13e-16,177;CL:0002032,1.73e-15,161;CL:0000837,1.73e-15,161;CL:0002087,5.92e-15,115;CL:0000738,1.33e-12,136;CL:0002031,3.32e-11,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-15;42!CL:0000049;1.70e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.53e-29!375;UBERON:0002390!1.87e-18!102;UBERON:0003061!1.87e-18!102;UBERON:0004765!6.77e-17!101;UBERON:0001434!6.77e-17!101;UBERON:0002371!1.08e-15!80;UBERON:0002405!1.43e-15!115;UBERON:0001474!1.69e-15!86;UBERON:0002193!2.59e-15!112;UBERON:0002204!9.54e-14!167;UBERON:0000479!1.85e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.83e-32,371;UBERON:0001434,3.63e-22,100;UBERON:0002390,3.51e-21,98;UBERON:0003061,3.51e-21,98;UBERON:0004765,1.08e-19,90;UBERON:0002371,2.73e-19,76;UBERON:0001474,3.11e-19,82;UBERON:0002193,3.81e-18,108;UBERON:0002204,2.01e-16,167;UBERON:0002405,8.57e-16,93;UBERON:0000479,6.92e-10,773 | |||
|phase1_expression=7.08545679155171,11.3473277662221,5.77913056793482,4.00293193412522,4.02264984984559,4.36169262050184,5.06599756336621,3.15859936713415,3.13422753839806,0.245733936501509,0,0,0,13.242999766725,12.5931002776608,0.672325146451775,1.20538905604795,0.730310090387373,2.43966399395253,0.369363174230364,0.204000691244253,1.56727360739044,0.286235987131057,0.136874425072884,0.502170558379211,1.29902789771517,1.88831355734875,1.73163718890094,11.8009283054671,5.75744097145819,11.1467608787575,0,0,0,0,0,8.51441274071057,16.0658668474244,23.4637003540066,15.1907609501096,36.2743068268677,32.389366601898,36.5757306040545,4.50734540216651,8.31327076115381,7.76268995801012,8.59987436551033,9.45686142450199,6.81354015969228,9.49384894663097,9.99026755463492,10.1687358852092,13.4450815487281,11.6187243045089,16.251178391321,4.1413314699373,4.36649840092553,4.71919317334678,14.3859429414324,11.5534449747394,12.7867425159808,17.1522676097092,10.9705011691898,24.7210355308963,14.2202526928006,20.425868088881,22.4216009638407,7.78870862295904,11.9941071236646,7.16723187526885,12.1079900526674,12.8897172595648,12.0255707227536,13.9428488965882,8.07896339867165,5.2414661377094,17.0739519342673,14.1166279271016,19.9299727504379,3.13514018115373,8.35450044236178,5.11459630540975,0,2.73069305631066,0.889509253863555,1.28019066769952,2.00197993518006,2.29900975981793,1.98313461835459,0.954053754535364,1.70763890732835,2.34894875748376,2.29363936875137,7.93027971474155,3.36305137788922,8.95505888235262,3.14735632182133,1.57204305099666,2.05601498999509,0,0.977766799900771,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0.260118695119756,2.95988228286617,2.76350017785848,1.15921234294021,1.63115219478266,1.87278579662799,2.09071047609954,1.35971211237079,0.766440987203842,0.34362744548263,1.26509846009751,1.27426165729639,3.25541726928209,0.950452044448374,2.25862678616659,2.8157054453972,1.24930726552346,1.65744076430812,1.64225599384209,1.41124720257313,1.87208137048455,1.88271725047639,0,0,0.767175371061182,2.89151321907653,4.51204119572301,5.64901423947212,3.9764297352555,8.27279279514481,0.567208902984407,0,0.351339142772504,2.03017567021455,0,0,0.97364218096405,0.870648686496336,2.6591592103773,4.05434061319081,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.366403487860815,2.63560834872127,3.87780264148325,0,16.8970463576408,0,0.794455084879313,1.14734648299525,2.12801029319014,3.92474320099615,0,0.49333509683432,0.622422070799533,0.134710672069688,0.326923806226917,1.51357427644931,2.88087962239999,2.81185718200556,9.36480230490961,2.85235910772225,7.32298534703825,3.05329696473789,4.04682360920329,2.52811452064047,10.6160169052544,6.5102188175237,12.8123968657949,13.0680314301026,24.7266929278557,8.19145225744224,4.31170885089743,7.23845290002485,6.6312815532141,6.64953877162039,12.7303510055443,10.4205850571667,23.5873752483357,0.113432183160021,3.04962380671065,4.27114777637135,6.14602513362729,1.80054657650641,3.29768093563004,6.44101350114073,5.21127197728451,1.5189869901714,2.92311015483596,2.27190396819703,5.33889412125336,1.45481451136931,2.13005755509969,1.30977727695932,1.69560592310488,0,0,0,0.487894824518382,1.19276791489337,0.929551542956147,0.621966330092223,0.504641701751257,0.72995471815166,3.12899064659632,5.14592750554308,1.38134921352481,2.78620756819187,3.60939740834793,1.30137480043828,2.19160097101532,0.723033089650446,1.43382164552112,1.30727666455444,1.18635309555548,1.48314438976181,1.17732879075208,1.15424147083917,0,0,0.4115740113314,4.41026134156626,51.9695642769506,42.2615703171379,60.8513603881846,0,4.42758378755209,0.686271241194102,0,0,0,0,2.28065813717227,1.03993478527958,0,0.463721619900307,0.821860859650752,0.144366447761074,0,0,0,0,28.5611727061381,22.9324179836453,33.7392738395413,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0.507983154337352,0.763976851116555,1.17217447210047,0,1.23392991243988,0,1.42913216315289,3.1396703616701,0.87192013766656,2.0534720029866,1.42198887333556,0,1.690605505112,3.98907174877306,4.16029747645464,1.80045161983499,0,1.0656887160644,0.857867961948885,0,0,0.65147236858747,0.710783897485092,0,0.301439377059586,0,0.099972991182057,9.72990245129524,15.0677127429638,18.9750545534728,3.59437283237374,6.89171615004683,1.42636905040718,3.76431397335706,4.9314317412092,1.96967059563885,8.07013036753396,3.74358444383662,2.15627574859517,2.31017465303547,1.01637849688985,0,0,0.167516265334349,0,3.74503511973591,14.9580729602012,8.28831026872071,12.5145321553523,7.50255781589516,17.0896964930833,1.24782516918484,1.42743191037729,1.89242898040722,1.87426263988341,1.20378439891088,2.27407504055985,4.1389228517002,2.65690239414175,2.76553752812555,4.95236602468072,1.17480694477644,9.95115929051482,7.03011288817817,9.49142483601914,7.68438416184799,0,0,0.604780586659361,6.94701861892575,5.06424511850606,7.57782254969299,6.27881831352935,2.04682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| |||
|short_description=p1@SNTB1 | |||
}} |
Revision as of 23:33, 22 January 2014
Short description: | p1@SNTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNTB1_5end |
Coexpression cluster: | C4724_osteosarcoma_Hepatocyte_hepatoblastoma_liver_acute_hepatocellular_CD14 |
Association with transcript: | 33bp_to_NM_021021, uc003ype.2, uc010mdg.2_5end |
EntrezGene: | SNTB1 |
HGNC: | 11168 |
UniProt: | Q13884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.22e-31 | 361 |
mesenchymal cell | 7.33e-29 | 354 |
defensive cell | 5.99e-25 | 48 |
phagocyte | 5.99e-25 | 48 |
monopoietic cell | 1.41e-23 | 59 |
monocyte | 1.41e-23 | 59 |
monoblast | 1.41e-23 | 59 |
promonocyte | 1.41e-23 | 59 |
multi fate stem cell | 6.04e-23 | 427 |
motile cell | 7.24e-22 | 386 |
myeloid leukocyte | 7.30e-22 | 72 |
macrophage dendritic cell progenitor | 9.97e-22 | 61 |
somatic stem cell | 4.16e-21 | 433 |
classical monocyte | 4.32e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.32e-21 | 42 |
myeloid cell | 4.75e-21 | 108 |
common myeloid progenitor | 4.75e-21 | 108 |
stem cell | 8.68e-21 | 441 |
myeloid lineage restricted progenitor cell | 1.10e-19 | 66 |
granulocyte monocyte progenitor cell | 3.04e-18 | 67 |
hematopoietic stem cell | 1.87e-16 | 168 |
hematopoietic cell | 6.13e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.73e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-15 | 161 |
nongranular leukocyte | 5.92e-15 | 115 |
leukocyte | 1.33e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 3.32e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.83e-32 | 371 |
skeletal system | 3.63e-22 | 100 |
hematopoietic system | 3.51e-21 | 98 |
blood island | 3.51e-21 | 98 |
skeletal element | 1.08e-19 | 90 |
bone marrow | 2.73e-19 | 76 |
bone element | 3.11e-19 | 82 |
hemolymphoid system | 3.81e-18 | 108 |
musculoskeletal system | 2.01e-16 | 167 |
immune system | 8.57e-16 | 93 |
tissue | 6.92e-10 | 773 |