FFCP PHASE1:Hg19::chr8:130798565..130798567,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=56169 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7151 | |||
|TSSclassifier=not | |||
|UniProt=Q9BYG8 | |||
|association_with_transcript=93bp_to_BC063595_5end | |||
|description=CAGE_peak_4_at_GSDMC_5end | |||
|id=chr8:130798565..130798567,- | |||
|ontology_enrichment_celltype=CL:0002076!3.96e-22!43;CL:0000223!7.81e-17!59;CL:0000066!9.56e-16!254;CL:0002159!5.15e-13!13;CL:0002368!1.46e-12!13;CL:0002251!3.48e-12!21;CL:0002621!4.84e-12!3;CL:0000622!8.23e-12!5;CL:0000076!5.94e-11!62;CL:0000154!7.56e-10!6;CL:0000317!8.90e-09!2;CL:1000448!8.90e-09!2;CL:0002308!8.90e-09!2;CL:0002140!8.90e-09!2;CL:0000575!1.86e-08!2;CL:0001014!2.24e-08!2;CL:0001016!2.24e-08!2;CL:0000362!1.29e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002621;3.75e-53;3!CL:0000317;3.11e-21;2!CL:1000448;3.11e-21;2!CL:0002308;3.11e-21;2!CL:0002140;3.11e-21;2!CL:0001014;5.15e-21;2!CL:0001016;5.15e-21;2!CL:0000622;2.53e-09;5!CL:0000453;3.10e-09;5!CL:0002251;6.17e-09;20!CL:0000154;5.54e-08;6!CL:0000840;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.89e-53,3;CL:0000317,3.11e-21,2;CL:1000448,3.11e-21,2;CL:0002308,3.11e-21,2;CL:0002140,3.11e-21,2;CL:0001014,3.81e-21,2;CL:0001016,3.81e-21,2;CL:0000622,2.53e-09,5;CL:0000453,2.74e-09,5;CL:0002251,6.42e-09,20;CL:0000154,5.54e-08,6;CL:0000840,5.92e-08,5;CL:0001029,5.92e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.81e-40;1 | |||
|ontology_enrichment_disease=DOID:1749!1.53e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.23e-14!72;UBERON:0004119!1.99e-14!169;UBERON:0000925!1.99e-14!169;UBERON:0006595!1.99e-14!169;UBERON:0000166!2.70e-12!21;UBERON:0001949!4.84e-12!3;UBERON:0000161!7.28e-12!35;UBERON:0000165!6.68e-11!28;UBERON:0000930!6.68e-11!28;UBERON:0001007!1.05e-10!155;UBERON:0001555!1.05e-10!155;UBERON:0007026!1.05e-10!155;UBERON:0003102!6.71e-09!95;UBERON:0002419!8.90e-09!2;UBERON:0007771!8.90e-09!2;UBERON:0003297!8.90e-09!2;UBERON:0001821!8.90e-09!2;UBERON:0003487!8.90e-09!2;UBERON:0001820!8.90e-09!2;UBERON:0005089!8.90e-09!2;UBERON:0005088!8.90e-09!2;UBERON:0005178!1.43e-08!34;UBERON:0002224!1.43e-08!34;UBERON:0000065!2.22e-08!53;UBERON:0005181!2.85e-08!35;UBERON:0001444!3.09e-08!48;UBERON:0005911!3.30e-07!82;UBERON:0000344!3.84e-07!12;UBERON:0000365!4.94e-07!5;UBERON:0004807!5.94e-07!28;UBERON:0003729!7.60e-07!5;UBERON:0000077!9.17e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.75e-53;3!UBERON:0003929;1.61e-23;7!UBERON:0002419;3.11e-21;2!UBERON:0007771;3.11e-21;2!UBERON:0003297;3.11e-21;2!UBERON:0001821;3.11e-21;2!UBERON:0003487;3.11e-21;2!UBERON:0001820;3.11e-21;2!UBERON:0003350;9.92e-21;8!UBERON:0001828;9.92e-21;8!UBERON:0001043;1.71e-14;3!UBERON:0000486;3.36e-14;12!UBERON:0003729;3.43e-13;13!UBERON:0010371;1.03e-12;31!UBERON:0000161;2.36e-09;19!UBERON:0000166;2.36e-09;19!UBERON:0000344;6.17e-09;20!UBERON:0004807;3.26e-08;22!UBERON:0001555;2.70e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.89e-53,3;UBERON:0002419,3.11e-21,2;UBERON:0007771,3.11e-21,2;UBERON:0003297,3.11e-21,2;UBERON:0001821,3.11e-21,2;UBERON:0003487,3.11e-21,2;UBERON:0001820,3.11e-21,2;UBERON:0005089,3.11e-21,2;UBERON:0005088,3.11e-21,2;UBERON:0003350,1.10e-20,8;UBERON:0001828,1.10e-20,8;UBERON:0001043,1.83e-14,3;UBERON:0009143,1.83e-14,3;UBERON:0003729,3.64e-13,13;UBERON:0000344,6.42e-09,20;UBERON:0000166,3.39e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0,0,0,0,0,1.35784623083787,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0.183428598521679,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.580120991762195,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.80822463617505,0.215166616178029,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@GSDMC | |||
}} |
Revision as of 23:51, 22 January 2014
Short description: | p4@GSDMC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GSDMC_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_BC063595_5end |
EntrezGene: | GSDMC |
HGNC: | 7151 |
UniProt: | Q9BYG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.89e-53 | 3 |
sebum secreting cell | 3.11e-21 | 2 |
epithelial cell of sweat gland | 3.11e-21 | 2 |
epithelial cell of skin gland | 3.11e-21 | 2 |
acinar cell of sebaceous gland | 3.11e-21 | 2 |
CD1a-positive Langerhans cell | 3.81e-21 | 2 |
immature CD1a-positive Langerhans cell | 3.81e-21 | 2 |
acinar cell | 2.53e-09 | 5 |
Langerhans cell | 2.74e-09 | 5 |
epithelial cell of alimentary canal | 6.42e-09 | 20 |
protein secreting cell | 5.54e-08 | 6 |
immature conventional dendritic cell | 5.92e-08 | 5 |
common dendritic progenitor | 5.92e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.89e-53 | 3 |
skin gland | 3.11e-21 | 2 |
epidermis gland | 3.11e-21 | 2 |
gland of integumental system | 3.11e-21 | 2 |
sebaceous gland | 3.11e-21 | 2 |
skin sebaceous gland | 3.11e-21 | 2 |
sweat gland | 3.11e-21 | 2 |
sweat gland placode | 3.11e-21 | 2 |
sebaceous gland placode | 3.11e-21 | 2 |
epithelium of mucosa | 1.10e-20 | 8 |
gingiva | 1.10e-20 | 8 |
esophagus | 1.83e-14 | 3 |
esophageal region | 1.83e-14 | 3 |
mouth mucosa | 3.64e-13 | 13 |
mucosa | 6.42e-09 | 20 |
oral opening | 3.39e-08 | 22 |