FFCP PHASE1:Hg19::chr8:134072500..134072514,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000519504_5end | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_6_at_SLA_5end | |||
|id=chr8:134072500..134072514,- | |||
|ontology_enrichment_celltype=CL:0000037!3.08e-43!172;CL:0000566!3.08e-43!172;CL:0000988!3.31e-43!182;CL:0000738!1.87e-40!140;CL:0002032!4.66e-38!165;CL:0000837!4.66e-38!165;CL:0000084!1.65e-31!25;CL:0000827!1.65e-31!25;CL:0002031!3.85e-31!124;CL:0002087!6.73e-30!119;CL:0000542!5.27e-23!53;CL:0000051!5.27e-23!53;CL:0000791!5.68e-23!18;CL:0000789!5.68e-23!18;CL:0002420!5.68e-23!18;CL:0002419!5.68e-23!18;CL:0000790!5.68e-23!18;CL:0000838!3.68e-22!52;CL:0000763!3.98e-16!112;CL:0000049!3.98e-16!112;CL:0000625!1.17e-14!11;CL:0000766!1.02e-12!76;CL:0000557!3.87e-11!71;CL:0002057!1.18e-09!42;CL:0000839!1.24e-09!70;CL:0000624!3.44e-09!6;CL:0000080!6.94e-09!6;CL:0000134!1.15e-08!358;CL:0000860!1.36e-08!45;CL:0002009!1.88e-08!65;CL:0002320!4.59e-08!365;CL:0002194!2.45e-07!63;CL:0000576!2.45e-07!63;CL:0000040!2.45e-07!63;CL:0000559!2.45e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.37e-39;25!CL:0000791;1.02e-30;18!CL:0000789;1.02e-30;18!CL:0002419;1.02e-30;18!CL:0000625;2.02e-22;11!CL:0000542;2.28e-13;53!CL:0000624;5.68e-12;6!CL:0000623;3.40e-09;3!CL:0000226;5.53e-09;3!CL:0000842;5.53e-09;3!CL:0000767;3.19e-08;3!CL:0000094;9.80e-08;8!CL:0000081;1.19e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.49e-39,25;CL:0000827,2.49e-39,25;CL:0000791,1.05e-30,18;CL:0000789,1.05e-30,18;CL:0002420,1.05e-30,18;CL:0002419,1.05e-30,18;CL:0000790,1.05e-30,18;CL:0000988,3.59e-27,177;CL:0000037,3.36e-25,168;CL:0000838,4.67e-24,52;CL:0000542,1.79e-23,53;CL:0000051,1.79e-23,53;CL:0000738,5.44e-23,136;CL:0000625,2.29e-22,11;CL:0002032,2.85e-21,161;CL:0000837,2.85e-21,161;CL:0002087,3.91e-16,115;CL:0002031,6.67e-15,120;CL:0000624,5.21e-12,6;CL:0000623,3.10e-09,3;CL:0000825,3.10e-09,3;CL:0000226,6.09e-09,3;CL:0000842,6.09e-09,3;CL:0000767,3.41e-08,3;CL:0000094,9.32e-08,8;CL:0000081,1.02e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.02e-30;18!CL:0000051;2.28e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!1.85e-08!51;DOID:0060083!1.85e-08!51;DOID:1240!2.02e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-24!102;UBERON:0003061!1.20e-24!102;UBERON:0002193!5.03e-23!112;UBERON:0000178!2.45e-16!15;UBERON:0000179!2.45e-16!15;UBERON:0000463!2.45e-16!15;UBERON:0002371!3.13e-10!80;UBERON:0002405!1.35e-09!115;UBERON:0001474!7.41e-09!86;UBERON:0002384!1.37e-07!375;UBERON:0004765!3.18e-07!101;UBERON:0001434!3.18e-07!101;UBERON:0004177!4.59e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.20e-30;15!UBERON:0000179;5.20e-30;15!UBERON:0000463;5.20e-30;15!UBERON:0002390;2.17e-15;32!UBERON:0002193;1.66e-08;42!UBERON:0002370;3.78e-07;2!UBERON:0005058;3.78e-07;2!UBERON:0009113;3.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.78e-30,15;UBERON:0000179,3.78e-30,15;UBERON:0000463,3.78e-30,15;UBERON:0002390,1.97e-10,98;UBERON:0003061,1.97e-10,98;UBERON:0002193,8.24e-10,108;UBERON:0002370,2.17e-07,4;UBERON:0005058,2.17e-07,4;UBERON:0009113,2.17e-07,4;UBERON:0003295,2.17e-07,4;UBERON:0005562,2.17e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,5.75744097145819,1.70297735647684,0,0,0,0,0,0.293600439334847,1.10799081706375,1.60435557976113,1.95309783644267,0,0.647787332037959,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.822335776043652,0,0.575384784644301,0.256160706529101,0,0.689491361473237,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0.918251677112708,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,1.13477044938228,0,0.502497330513487,1.5644487552606,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,1.63841583378639,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,6.1655941927969,0.790152254325231,8.26181034478099,7.07419372948497,5.75684197198626,0,4.88883399950386,1.4203434172042,0,2.1167986808183,0.589211814949674,1.77227115666897,1.35401931882508,0.640456598628376,1.95089021339817,1.31550323682941,0.552700035571697,0.869409257205157,3.11401782640327,4.81573490561484,2.09071047609954,0.793165398882963,7.2811893784365,6.52892146416997,4.30133476433155,2.54852331459277,0.651083453856419,2.85135613334512,3.312652619711,6.01537072425766,1.24930726552346,2.36777252044017,1.64225599384209,4.23374160771938,9.89528724398977,5.35850294366356,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.531831842075461,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.3902029239046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.352193736052904,1.03664057770386,4.32359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,5.71389204585589,6.90008239550455,4.74869234235069,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,4.09856981555372,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.70894156152249,2.38231775457789,1.64544909234478,3.24236655596359,1.08006287447623,2.37937552888281,0,0,0,0.743212700502875,0,22.0539714380084,12.9135280910346,7.78359548587985,0,2.32840940996271,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0.146508179271894,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0,3.13127361030843,0,0.19924798825107,1.65770349318689,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,18.3947936752326,18.994611023798,12.6320878244119,0,0,0,0,3.65554131654871,0,0,0,0,0,0,0,1.77912677208373,2.47127877893006,1.98401704060365,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,0.77380195455795,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,1.18566979138767,0.730755590285376,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.490696182767533,0,0,0,0.999936979274649,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.751871343838829,0.902410431630081,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,1.90451545170992,63.490898368794,43.0798517213254,0,0,0,0,0,1.81850543139386,0,0.665320713092027,0,0,0,0,0,0,0,0,12.0764276154616,0 | |||
|short_description=p6@SLA | |||
}} |
Revision as of 00:01, 23 January 2014
Short description: | p6@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLA_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 18bp_to_ENST00000519504_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.49e-39 | 25 |
pro-T cell | 2.49e-39 | 25 |
mature alpha-beta T cell | 1.05e-30 | 18 |
alpha-beta T cell | 1.05e-30 | 18 |
immature T cell | 1.05e-30 | 18 |
mature T cell | 1.05e-30 | 18 |
immature alpha-beta T cell | 1.05e-30 | 18 |
hematopoietic cell | 3.59e-27 | 177 |
hematopoietic stem cell | 3.36e-25 | 168 |
lymphoid lineage restricted progenitor cell | 4.67e-24 | 52 |
lymphocyte | 1.79e-23 | 53 |
common lymphoid progenitor | 1.79e-23 | 53 |
leukocyte | 5.44e-23 | 136 |
CD8-positive, alpha-beta T cell | 2.29e-22 | 11 |
hematopoietic oligopotent progenitor cell | 2.85e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.85e-21 | 161 |
nongranular leukocyte | 3.91e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 6.67e-15 | 120 |
CD4-positive, alpha-beta T cell | 5.21e-12 | 6 |
natural killer cell | 3.10e-09 | 3 |
pro-NK cell | 3.10e-09 | 3 |
single nucleate cell | 6.09e-09 | 3 |
mononuclear cell | 6.09e-09 | 3 |
basophil | 3.41e-08 | 3 |
granulocyte | 9.32e-08 | 8 |
blood cell | 1.02e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 3.78e-30 | 15 |
haemolymphatic fluid | 3.78e-30 | 15 |
organism substance | 3.78e-30 | 15 |
hematopoietic system | 1.97e-10 | 98 |
blood island | 1.97e-10 | 98 |
hemolymphoid system | 8.24e-10 | 108 |
thymus | 2.17e-07 | 4 |
hemolymphoid system gland | 2.17e-07 | 4 |
thymic region | 2.17e-07 | 4 |
pharyngeal gland | 2.17e-07 | 4 |
thymus primordium | 2.17e-07 | 4 |