FFCP PHASE1:Hg19::chr9:140063847..140063858,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=38930 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-125bp_to_NR_037416_5end | |||
|coexpression_cluster_id=C744 | |||
|description=CAGE_peak_2_at_MIR3621_5end | |||
|id=chr9:140063847..140063858,- | |||
|ontology_enrichment_celltype=CL:0000066!1.52e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.14e-08,253;CL:0000784,6.96e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.13e-17;29!UBERON:0006595;3.47e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.41e-35!106;DOID:0050687!1.78e-28!143;DOID:162!1.09e-25!235;DOID:14566!3.14e-24!239;DOID:299!4.03e-11!25;DOID:0050686!3.39e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:305;8.04e-11;106!DOID:299;7.20e-10;25!DOID:5093;9.31e-09;4!DOID:1612;9.31e-09;4!DOID:0050615;7.90e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.52e-30,106;DOID:0050687,1.49e-22,143;DOID:162,2.28e-19,235;DOID:14566,1.51e-18,239;DOID:299,7.81e-10,25;DOID:0050686,9.64e-10,137;DOID:5093,9.35e-09,4;DOID:1612,9.35e-09,4;DOID:0050615,6.60e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.39e-17!129;UBERON:0004185!3.39e-17!129;UBERON:0001007!2.48e-14!155;UBERON:0001555!2.48e-14!155;UBERON:0007026!2.48e-14!155;UBERON:0001041!1.83e-13!98;UBERON:0000077!5.14e-13!130;UBERON:0004119!1.55e-11!169;UBERON:0000925!1.55e-11!169;UBERON:0006595!1.55e-11!169;UBERON:0005409!2.20e-11!35;UBERON:0001737!2.43e-09!9;UBERON:0000072!7.11e-09!46;UBERON:0008947!3.34e-08!38;UBERON:0003258!3.34e-08!38;UBERON:0000160!3.89e-08!27;UBERON:0001557!4.05e-08!19;UBERON:0002108!5.52e-08!14;UBERON:0002075!7.78e-08!18;UBERON:0000065!9.33e-08!53;UBERON:0002114!5.69e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.90e-16;9!UBERON:0001557;3.90e-16;9!UBERON:0000072;3.16e-12;37!UBERON:0000065;1.38e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.22e-16,9;UBERON:0008947,1.92e-13,38;UBERON:0003258,1.92e-13,38;UBERON:0000072,2.79e-13,47;UBERON:0004921,3.77e-13,118;UBERON:0001041,4.33e-13,87;UBERON:0001007,1.95e-11,145;UBERON:0001555,1.95e-11,145;UBERON:0007026,1.95e-11,145;UBERON:0001557,4.66e-11,19;UBERON:0000065,1.03e-10,54;UBERON:0001004,1.30e-10,74;UBERON:0004119,2.80e-09,160;UBERON:0000925,2.80e-09,160;UBERON:0006595,2.80e-09,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,5.99334302984604,5.11620078538915,0.393364276848904,0,0.154816123316076,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,19.0792499444274,18.3038371449641,20.8016200744556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,1.06023814657188,0.348581828608555,0.725627385107593,0.756962552626885,1.45990943630332,0,0,0,0,0,7.45332840251016,6.23763353288976,5.3022426574366,6.94852028214082,5.22910665821775,8.77901290711057,6.60673409984806,9.22240886089127,8.0796902958742,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,22.915927540819,24.8960987007513,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0.50496973370552,1.46045156871989,0,0,0,0,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16383192917273,0,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0,0,2.05160100093111,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.747768497892312,0,0.245040215981032,6.13150477914872,3.46246111143468,0,0,0.59873811429845,0,0.211673582723883,0,0.842391534340376,0,1.41011906195721,2.50634477090067,0,0,0,0,0,5.53033375755224,4.92087437363315,5.50602167649298,0,0,0,0,0,0,20.0240378236795,0,1.09224469574562,0,2.84136146806413,0,0,0,0,0.422008249231538,0,0,0.422250816255987,3.38721580026819,0.276283915531148,4.53478946137697,0,0.123084805461069,0,1.16828856491525,1.25314822272926,5.11572370226872,0.197286811273867,0,0,0.969332746095218,0,0,14.3235268596878,145.271059993681,1.44999915086959,0.1137934482855,3.81380475439149,5.67330436243047,2.41320361269025,0.291604613383254,7.11862479226498,0,0.120596438625408,0,1.54810963903714,2.36438095162838,0,1.30726156222788,0.975966209950223,0.0769502585037971,0.113942055847001,0.922255617552241,1.52587995496613,0,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0.489698424477443,0.848118428603645,0,1.99052386215701,0.265372693510018,1.22206028986725,1.77912677208373,5.31324937469962,4.59456577824004,0.067401132980677,0,0.234264445725339,4.19646015196032,4.10895699757388,1.21390189767046,28.8046614080055,0,3.0607276163049,0,0,0.414752765588989,0.664653872707185,0.330991955875499,0.941798755221676,2.38944859545918,0.284609546029793,0.554698692052555,1.38847790668105,0,0.0870592065804026,0.34945333648406,0,6.4826741963687,5.18934151311917,8.12943024826771,0.0969890164884194,0.0882561266915003,2.25980740780532,0,0.19871461170299,0.253243183823515,12.7108398777622,2.32460578729448,0.640358984218058,3.19695375331408,6.62815918908888,1.03082936549324,0,1.4405479798815,0.124252535565433,3.29971648463514,0.271808412147228,0.313808538937,0.203996435272644,0,0,0,3.83239764200917,0,3.15464825135177,0,0,0,1.39775300349294,0.429226048136571,0,0.134366944973453,0,2.32991899054908,0.86661500537946,0.164831716762333,0.471824806979294,5.61036644634068,6.94321322939433,0,0.136203406111576,0.321506296930038,2.06309154895851,0.83088067605837,0,0,0.607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.35857467866569,6.71703190618059,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.342173675768659,2.81926008926669,0,0.943225830597996,0,0,0.988058159489721,0.243585196761792,0.638341257770182,0,0,0,0,1.57054096250234,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,3.27834434064817,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,4.83539870920016,0,0,0,1.3503982678964,0,0,0.690860683462397,0.607719912354764,0,0.779441235357554,0.265729680626726,0.654261577023377,0.327609848846413,0,0.845248493434508,0.79994958341972,0,0,0,0,0,0,1.15104934173287,0.646948868380091,0,0.982886743728125,0.169732529954025,0,0,0,0,2.60243758504136,0,0,0,0.321146125482298,0,0,0.615349092722265,2.26864526599546,0.553258019713743,0.645902582527404,0,0,1.1796972334774,0.183428598521679,0.231051332300676,0,0.690359926060101,0,0,0,1.56302802246618,5.50004058410987,2.12903492763126,0.295712172434091,0.2026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| |||
|short_description=p2@MIR3621 | |||
}} |
Revision as of 04:18, 23 January 2014
Short description: | p2@MIR3621 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR3621_5end |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | -125bp_to_NR_037416_5end |
EntrezGene: | MIR3621 |
HGNC: | 38930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.14e-08 | 253 |
plasmacytoid dendritic cell | 6.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.22e-16 | 9 |
respiratory primordium | 1.92e-13 | 38 |
endoderm of foregut | 1.92e-13 | 38 |
segment of respiratory tract | 2.79e-13 | 47 |
subdivision of digestive tract | 3.77e-13 | 118 |
foregut | 4.33e-13 | 87 |
digestive system | 1.95e-11 | 145 |
digestive tract | 1.95e-11 | 145 |
primitive gut | 1.95e-11 | 145 |
upper respiratory tract | 4.66e-11 | 19 |
respiratory tract | 1.03e-10 | 54 |
respiratory system | 1.30e-10 | 74 |
endoderm-derived structure | 2.80e-09 | 160 |
endoderm | 2.80e-09 | 160 |
presumptive endoderm | 2.80e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.52e-30 | 106 |
cell type cancer | 1.49e-22 | 143 |
cancer | 2.28e-19 | 235 |
disease of cellular proliferation | 1.51e-18 | 239 |
adenocarcinoma | 7.81e-10 | 25 |
organ system cancer | 9.64e-10 | 137 |
thoracic cancer | 9.35e-09 | 4 |
breast cancer | 9.35e-09 | 4 |
respiratory system cancer | 6.60e-07 | 16 |