FFCP PHASE1:Hg19::chrX:54070360..54070387,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20672 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JPR8 | |||
|association_with_transcript=107bp_to_ENST00000415025_5end | |||
|description=CAGE_peak_3_at_PHF8_5end | |||
|id=chrX:54070360..54070387,- | |||
|ontology_enrichment_celltype=CL:0000542!8.19e-12!53;CL:0000051!8.19e-12!53;CL:0000838!9.24e-12!52;CL:0000791!2.62e-09!18;CL:0000789!2.62e-09!18;CL:0002420!2.62e-09!18;CL:0002419!2.62e-09!18;CL:0000790!2.62e-09!18;CL:0000084!2.10e-08!25;CL:0000827!2.10e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.72e-09;18!CL:0000789;1.72e-09;18!CL:0002419;1.72e-09;18!CL:0000084;3.31e-09;25!CL:0000542;6.61e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.00e-12,53;CL:0000051,5.00e-12,53;CL:0000838,5.63e-12,52;CL:0000791,2.24e-09,18;CL:0000789,2.24e-09,18;CL:0002420,2.24e-09,18;CL:0002419,2.24e-09,18;CL:0000790,2.24e-09,18;CL:0000084,1.30e-08,25;CL:0000827,1.30e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.72e-09;18!CL:0000051;6.61e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@PHF8 | |||
}} |
Revision as of 05:47, 23 January 2014
Short description: | p3@PHF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHF8_5end |
Coexpression cluster: | NA |
Association with transcript: | 107bp_to_ENST00000415025_5end |
EntrezGene: | PHF8 |
HGNC: | 20672 |
UniProt: | Q5JPR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.00e-12 | 53 |
common lymphoid progenitor | 5.00e-12 | 53 |
lymphoid lineage restricted progenitor cell | 5.63e-12 | 52 |
mature alpha-beta T cell | 2.24e-09 | 18 |
alpha-beta T cell | 2.24e-09 | 18 |
immature T cell | 2.24e-09 | 18 |
mature T cell | 2.24e-09 | 18 |
immature alpha-beta T cell | 2.24e-09 | 18 |
T cell | 1.30e-08 | 25 |
pro-T cell | 1.30e-08 | 25 |