FFCP PHASE1:Hg19::chrX:69643186..69643195,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25974 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCC8 | |||
|association_with_transcript=195bp_to_ENST00000374382,uc004dyh.2,uc010nkx.1,uc010nky.1,uc011mpk.1,uc011mpl.1,uc011mpm.1_5end | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_4_at_GDPD2_5end | |||
|id=chrX:69643186..69643195,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.44e-11!5;CL:0000039!4.10e-08!7;CL:0000586!4.10e-08!7;CL:0000128!5.60e-08!7;CL:0000126!5.60e-08!7;CL:0000127!5.60e-08!7;CL:0002453!5.60e-08!7;CL:0002605!1.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.80e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;8.94e-20;1!DOID:3149;8.94e-20;1!DOID:3451;1.43e-10;2!DOID:4159;1.43e-10;2!DOID:0060122;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.95e-20,1;DOID:3149,8.95e-20,1;DOID:3451,1.43e-10,2;DOID:4159,1.43e-10,2;DOID:0060122,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.89e-39!57;UBERON:0005068!9.89e-39!57;UBERON:0006241!9.89e-39!57;UBERON:0007135!9.89e-39!57;UBERON:0001017!6.63e-35!82;UBERON:0005743!8.83e-33!86;UBERON:0002616!2.99e-32!59;UBERON:0000955!7.58e-30!69;UBERON:0006238!7.58e-30!69;UBERON:0000073!1.19e-28!94;UBERON:0001016!1.19e-28!94;UBERON:0003075!1.61e-27!86;UBERON:0007284!1.61e-27!86;UBERON:0002346!7.79e-26!90;UBERON:0002780!9.23e-25!41;UBERON:0001890!9.23e-25!41;UBERON:0006240!9.23e-25!41;UBERON:0003080!5.02e-24!42;UBERON:0007023!6.17e-21!115;UBERON:0002020!6.35e-21!34;UBERON:0003528!6.35e-21!34;UBERON:0001893!6.91e-21!34;UBERON:0002791!1.52e-19!33;UBERON:0000033!2.42e-18!123;UBERON:0001869!6.78e-18!32;UBERON:0003056!8.43e-18!61;UBERON:0000153!5.20e-17!129;UBERON:0007811!5.20e-17!129;UBERON:0004121!6.65e-17!169;UBERON:0003076!2.18e-16!15;UBERON:0003057!2.18e-16!15;UBERON:0000924!3.07e-16!173;UBERON:0006601!3.07e-16!173;UBERON:0002308!3.20e-15!9;UBERON:0000125!3.20e-15!9;UBERON:0004733!7.23e-14!12;UBERON:0002028!7.23e-14!12;UBERON:0007277!7.23e-14!12;UBERON:0002298!1.98e-13!8;UBERON:0004732!1.17e-12!13;UBERON:0009663!1.36e-11!7;UBERON:0000956!4.86e-10!25;UBERON:0000203!4.86e-10!25;UBERON:0002420!7.70e-09!9;UBERON:0007245!7.70e-09!9;UBERON:0010009!7.70e-09!9;UBERON:0010011!7.70e-09!9;UBERON:0000454!7.70e-09!9;UBERON:0001896!2.59e-08!3;UBERON:0005290!2.59e-08!3;UBERON:0010096!2.59e-08!3;UBERON:0002680!4.04e-08!9;UBERON:0001895!4.04e-08!9;UBERON:0010092!4.04e-08!9;UBERON:0000064!4.96e-08!219;UBERON:0003135!1.47e-07!11;UBERON:0000988!3.79e-07!3;UBERON:0006331!4.32e-07!3;UBERON:0000062!8.75e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.07e-33;4!UBERON:0006947;5.50e-25;3!UBERON:0004054;5.50e-25;3!UBERON:0005409;1.20e-19;22!UBERON:0001301;1.42e-19;1!UBERON:0001000;3.56e-19;1!UBERON:0005352;3.56e-19;1!UBERON:0005904;5.15e-19;4!UBERON:0000160;2.16e-16;17!UBERON:0004921;1.26e-11;33!UBERON:0001875;2.85e-10;2!UBERON:0006514;2.85e-10;2!UBERON:0000058;3.50e-08;10!UBERON:0003135;1.62e-07;11!UBERON:0001896;2.12e-07;3!UBERON:0005290;2.12e-07;3!UBERON:0002114;2.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.98e-33,4;UBERON:0006947,5.50e-25,3;UBERON:0004054,5.50e-25,3;UBERON:0001301,1.08e-19,1;UBERON:0001000,4.69e-19,1;UBERON:0005352,4.69e-19,1;UBERON:0005904,5.15e-19,4;UBERON:0005409,2.07e-17,25;UBERON:0000160,2.25e-16,17;UBERON:0001875,2.99e-10,2;UBERON:0006514,2.99e-10,2;UBERON:0003135,1.62e-07,11;UBERON:0001896,2.19e-07,3;UBERON:0005290,2.19e-07,3;UBERON:0010096,2.19e-07,3;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.821246550437305,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0.185176890317059,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,1.76915129006678,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,1.18375320854817,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.0870592065804026,2.97035336011451,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0.412618309791701,0,0,0,0.425246896606173,12.7465181287721,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,2.29363678276028,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0.314231179832004,0.560544326627578,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54674721756217,2.18559560503957,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.271965960763659,0,1.0580536810308,0,0,0,0.378499274505237,0,0,0,0.534434810531121,0.459474497674225,0.752122617877125,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@GDPD2 | |||
}} |
Revision as of 05:58, 23 January 2014
Short description: | p4@GDPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GDPD2_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | 195bp_to_ENST00000374382, uc004dyh.2, uc010nkx.1, uc010nky.1, uc011mpk.1, uc011mpl.1, uc011mpm.1_5end |
EntrezGene: | GDPD2 |
HGNC: | 25974 |
UniProt: | Q9HCC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 5.98e-33 | 4 |
male genital duct | 5.50e-25 | 3 |
internal male genitalia | 5.50e-25 | 3 |
epididymis | 1.08e-19 | 1 |
vas deferens | 4.69e-19 | 1 |
spermatic cord | 4.69e-19 | 1 |
duct of male reproductive system | 5.15e-19 | 4 |
gastrointestinal system | 2.07e-17 | 25 |
intestine | 2.25e-16 | 17 |
globus pallidus | 2.99e-10 | 2 |
pallidum | 2.99e-10 | 2 |
male reproductive organ | 1.62e-07 | 11 |
medulla oblongata | 2.19e-07 | 3 |
myelencephalon | 2.19e-07 | 3 |
future myelencephalon | 2.19e-07 | 3 |
duodenum | 3.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.95e-20 | 1 |
keratoacanthoma | 8.95e-20 | 1 |
skin carcinoma | 1.43e-10 | 2 |
skin cancer | 1.43e-10 | 2 |
integumentary system cancer | 1.43e-10 | 2 |