FFCP PHASE1:Hg19::chrX:110039368..110039388,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29861 | |||
|TSSclassifier=strong | |||
|UniProt=D3YTA8,D3DUY6,Q9BU40,E9PGS5,B4DMP3 | |||
|association_with_transcript=-82bp_to_ENST00000434224,NM_001143981,NM_001143982,NM_001143983,uc004eot.2,uc004eou.3,uc004eox.3,uc010nps.2,uc011mss.1_5end | |||
|description=CAGE_peak_7_at_CHRDL1_5end | |||
|id=chrX:110039368..110039388,- | |||
|ontology_enrichment_celltype=CL:0000128!3.30e-08!7;CL:0000126!3.30e-08!7;CL:0000127!3.30e-08!7;CL:0002453!3.30e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000064;6.53e-15;3!CL:0000067;6.53e-15;3!CL:0005012;6.53e-15;3!CL:0002304;6.53e-15;3!CL:0000222;2.93e-12;1!CL:0000540;4.57e-08;6!CL:0000404;4.57e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.68e-15,3;CL:0000067,5.68e-15,3;CL:0005012,5.68e-15,3;CL:0002304,5.68e-15,3;CL:0000540,3.51e-08,6;CL:0000031,3.51e-08,6;CL:0000404,3.51e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.17e-12;1!CL:0000031;4.57e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-29!115;UBERON:0002346!1.64e-28!90;UBERON:0003075!1.60e-27!86;UBERON:0007284!1.60e-27!86;UBERON:0001049!7.96e-27!57;UBERON:0005068!7.96e-27!57;UBERON:0006241!7.96e-27!57;UBERON:0007135!7.96e-27!57;UBERON:0005743!1.76e-26!86;UBERON:0001017!2.21e-25!82;UBERON:0000073!3.35e-25!94;UBERON:0001016!3.35e-25!94;UBERON:0002616!3.18e-22!59;UBERON:0003056!6.90e-20!61;UBERON:0001893!7.28e-19!34;UBERON:0000955!2.39e-18!69;UBERON:0006238!2.39e-18!69;UBERON:0002791!1.25e-17!33;UBERON:0002780!1.75e-17!41;UBERON:0001890!1.75e-17!41;UBERON:0006240!1.75e-17!41;UBERON:0001869!4.23e-17!32;UBERON:0002020!4.61e-17!34;UBERON:0003528!4.61e-17!34;UBERON:0003080!6.81e-17!42;UBERON:0000924!8.90e-16!173;UBERON:0006601!8.90e-16!173;UBERON:0000153!3.57e-15!129;UBERON:0007811!3.57e-15!129;UBERON:0004121!6.66e-15!169;UBERON:0000033!9.63e-15!123;UBERON:0000956!3.70e-13!25;UBERON:0000203!3.70e-13!25;UBERON:0003076!1.34e-11!15;UBERON:0003057!1.34e-11!15;UBERON:0001950!5.63e-11!20;UBERON:0004733!3.44e-10!12;UBERON:0002028!3.44e-10!12;UBERON:0007277!3.44e-10!12;UBERON:0002619!1.05e-09!22;UBERON:0004732!3.11e-09!13;UBERON:0000064!6.93e-08!219;UBERON:0000488!8.52e-08!4;UBERON:0000468!1.53e-07!659;UBERON:0007625!3.84e-07!11;UBERON:0002680!4.85e-07!9;UBERON:0001895!4.85e-07!9;UBERON:0010092!4.85e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;6.53e-15;3!UBERON:0001775;6.53e-15;3!UBERON:0005795;8.17e-12;1!UBERON:0007029;8.17e-12;1!UBERON:0000989;8.17e-12;1!UBERON:0008811;8.17e-12;1!UBERON:0000488;2.02e-11;4!UBERON:0002050;2.57e-09;5!UBERON:0005423;2.57e-09;5!UBERON:0007625;3.89e-09;11!UBERON:0002203;6.59e-08;6!UBERON:0001768;6.59e-08;6!UBERON:0002200;6.59e-08;6!UBERON:0000020;1.69e-07;23!UBERON:0001801;2.77e-07;14!UBERON:0001032;3.42e-07;24!UBERON:0004456;3.42e-07;24!UBERON:0000922;8.23e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,5.68e-15,3;UBERON:0001775,5.68e-15,3;UBERON:0000989,5.62e-12,1;UBERON:0008811,5.62e-12,1;UBERON:0006258,5.62e-12,1;UBERON:0005876,5.62e-12,1;UBERON:0004874,5.62e-12,1;UBERON:0007029,6.26e-12,1;UBERON:0000488,1.82e-11,4;UBERON:0007625,3.95e-09,11;UBERON:0002203,6.16e-08,6;UBERON:0001768,6.16e-08,6;UBERON:0002200,6.16e-08,6;UBERON:0001801,2.80e-07,14;UBERON:0000020,3.43e-07,24;UBERON:0001032,3.43e-07,24;UBERON:0004456,3.43e-07,24 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.940364164434263,0.85870796139317,0.958120975510189,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89069634328136,1.10864698731282,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530119073285941,0,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.811512834825538,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,6.03058555203656,1.91381625495949,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0,0,0.704815022316672,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,1.08803560673895,0.2506898940227,0.919036730290385,0.655745261419609,0,0,0.366078794705889,0,1.14681839138014,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0.255788742607303,0,0.314531883711793,0,0,1.2754495206101,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.615349092722265,2.01657356977374,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.49131575253029,0,0.742913430802341,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,1.48863353516788,0,0,0,0,0.606965604236632,0,0,0,0,0.135939465953663,0.263091094251396,0,0,1.41287567130925,0.314231179832004,0,1.82631744101899,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.339957450954573,0.872701380680755,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0,0,0,0.12729431655633,0.606351566874658,0,1.36893320434112,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0.366724332548599,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p7@CHRDL1 | |||
}} |
Revision as of 06:37, 23 January 2014
Short description: | p7@CHRDL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CHRDL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000434224, NM_001143981, NM_001143982, NM_001143983, uc004eot.2, uc004eou.3, uc004eox.3, uc010nps.2, uc011mss.1_5end |
EntrezGene: | CHRDL1 |
HGNC: | 29861 |
UniProt: | D3YTA8D3DUY6Q9BU40E9PGS5B4DMP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.68e-15 | 3 |
ciliated epithelial cell | 5.68e-15 | 3 |
multi-ciliated epithelial cell | 5.68e-15 | 3 |
non-pigmented ciliary epithelial cell | 5.68e-15 | 3 |
neuron | 3.51e-08 | 6 |
neuroblast | 3.51e-08 | 6 |
electrically signaling cell | 3.51e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 5.68e-15 | 3 |
ciliary body | 5.68e-15 | 3 |
penis | 5.62e-12 | 1 |
intromittent organ | 5.62e-12 | 1 |
lateral plate mesenchyme | 5.62e-12 | 1 |
undifferentiated genital tubercle | 5.62e-12 | 1 |
somatopleure | 5.62e-12 | 1 |
surface | 6.26e-12 | 1 |
atypical epithelium | 1.82e-11 | 4 |
pigment epithelium of eye | 3.95e-09 | 11 |
vasculature of eye | 6.16e-08 | 6 |
uvea | 6.16e-08 | 6 |
vasculature of head | 6.16e-08 | 6 |
anterior segment of eyeball | 2.80e-07 | 14 |
sense organ | 3.43e-07 | 24 |
sensory system | 3.43e-07 | 24 |
entire sense organ system | 3.43e-07 | 24 |