FFCP PHASE1:Hg19::chrX:153305829..153305840,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6990 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-275bp_to_ENST00000481807_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_MECP2_5end | |||
|id=chrX:153305829..153305840,- | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-67!42;CL:0000860!2.55e-62!45;CL:0000766!1.69e-49!76;CL:0002194!1.14e-42!63;CL:0000576!1.14e-42!63;CL:0000040!1.14e-42!63;CL:0000559!1.14e-42!63;CL:0000839!1.21e-41!70;CL:0002009!5.21e-41!65;CL:0000557!6.89e-41!71;CL:0000738!4.58e-31!140;CL:0000763!8.78e-31!112;CL:0000049!8.78e-31!112;CL:0002087!2.00e-27!119;CL:0002031!2.02e-24!124;CL:0000988!1.17e-23!182;CL:0000037!1.40e-23!172;CL:0000566!1.40e-23!172;CL:0002032!9.79e-22!165;CL:0000837!9.79e-22!165;CL:0000048!8.32e-16!430;CL:0000034!2.17e-15!444;CL:0000723!2.64e-15!436;CL:0000219!5.97e-14!390;CL:0000134!1.22e-13!358;CL:0002320!4.90e-13!365;CL:0002393!2.96e-11!9;CL:0002397!2.96e-11!9;CL:0002371!1.33e-10!591;CL:0000144!4.96e-10!625;CL:0000081!2.60e-09!11;CL:0000767!9.06e-08!3;CL:0000012!2.55e-07!682;CL:0000094!2.83e-07!8;CL:0000548!6.92e-07!679;CL:0000004!6.92e-07!679;CL:0000255!6.92e-07!679;CL:0000842!8.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.56e-109;33!CL:0002057;1.56e-109;33!CL:0000473;2.63e-74;39!CL:0000234;2.63e-74;39!CL:0000576;2.17e-59;48!CL:0000766;5.20e-43;69!CL:0000763;1.47e-18;100!CL:0000094;3.75e-17;8!CL:0000767;4.94e-17;3!CL:0002087;2.71e-15;104!CL:0000081;2.01e-12;11!CL:0000771;2.87e-12;2!CL:0000738;7.17e-10;136!CL:0002393;2.22e-09;6!CL:0002397;2.22e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.39e-115,42;CL:0002057,9.39e-115,42;CL:0000473,1.06e-99,48;CL:0000234,1.06e-99,48;CL:0000766,4.10e-88,72;CL:0002194,1.27e-78,59;CL:0000576,1.27e-78,59;CL:0000040,1.27e-78,59;CL:0000559,1.27e-78,59;CL:0002009,6.67e-76,61;CL:0000839,8.25e-70,66;CL:0000557,1.07e-68,67;CL:0000763,4.95e-57,108;CL:0000049,4.95e-57,108;CL:0000738,3.92e-44,136;CL:0002087,7.24e-38,115;CL:0002032,2.24e-36,161;CL:0000837,2.24e-36,161;CL:0002031,4.65e-36,120;CL:0000037,1.30e-34,168;CL:0000988,1.50e-32,177;CL:0000094,3.68e-17,8;CL:0000767,4.94e-17,3;CL:0000134,3.71e-13,354;CL:0002320,8.90e-13,361;CL:0000081,1.98e-12,11;CL:0000771,2.79e-12,2;CL:0000219,1.94e-11,386;CL:0000048,8.52e-10,427;CL:0000723,1.44e-09,433;CL:0000034,2.82e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.28e-85;42!CL:0000049;3.54e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.98e-35!80;UBERON:0001474!1.11e-31!86;UBERON:0002390!4.09e-31!102;UBERON:0003061!4.09e-31!102;UBERON:0002193!3.45e-27!112;UBERON:0004765!1.20e-26!101;UBERON:0001434!1.20e-26!101;UBERON:0003081!4.05e-23!216;UBERON:0002204!4.84e-23!167;UBERON:0002405!5.07e-22!115;UBERON:0002384!8.00e-13!375;UBERON:0000926!3.53e-08!448;UBERON:0004120!3.53e-08!448;UBERON:0006603!3.53e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.38e-60,76;UBERON:0001474,3.06e-55,82;UBERON:0004765,7.12e-50,90;UBERON:0002405,4.26e-48,93;UBERON:0002390,2.25e-45,98;UBERON:0003061,2.25e-45,98;UBERON:0001434,2.33e-44,100;UBERON:0002193,1.13e-40,108;UBERON:0002204,2.58e-24,167;UBERON:0003081,5.70e-19,203;UBERON:0002384,2.94e-12,371;UBERON:0000926,4.18e-10,315;UBERON:0004120,4.18e-10,315;UBERON:0006603,4.18e-10,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,3.93364276848904,3.45446458287491,4.64448369948228,0,0,0,0,0,0,9.97191735357379,10.8294001633877,9.54847831149748,0,0,0,0.726991193897824,1.13362783106643,0.727752183563449,4.64858073811369,2.87817521615278,7.12324653058738,5.75384784644301,4.86705342405291,5.67557351732605,10.6871161028352,7.74581620300591,9.47985406160392,2.82363509313907,1.63743690034707,2.47195832889593,10.1007684482398,9.62787081228281,10.8687311385837,0.659702600373432,1.79517291859469,2.55734850319616,11.6083695451434,5.6738522469114,6.85104473895132,3.01498398308092,6.25779502104242,5.86409880703815,6.05399502633369,12.1531619875896,8.54448446090388,0.211255286311942,0.850417199860174,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,11.6334079244498,0,0,0,0.926864265692532,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686520205190771,0,0.310874401165561,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@MECP2 | |||
}} |
Revision as of 07:29, 23 January 2014
Short description: | p6@MECP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MECP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -275bp_to_ENST00000481807_5end |
EntrezGene: | MECP2 |
HGNC: | 6990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.39e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.39e-115 | 42 |
defensive cell | 1.06e-99 | 48 |
phagocyte | 1.06e-99 | 48 |
myeloid leukocyte | 4.10e-88 | 72 |
monopoietic cell | 1.27e-78 | 59 |
monocyte | 1.27e-78 | 59 |
monoblast | 1.27e-78 | 59 |
promonocyte | 1.27e-78 | 59 |
macrophage dendritic cell progenitor | 6.67e-76 | 61 |
myeloid lineage restricted progenitor cell | 8.25e-70 | 66 |
granulocyte monocyte progenitor cell | 1.07e-68 | 67 |
myeloid cell | 4.95e-57 | 108 |
common myeloid progenitor | 4.95e-57 | 108 |
leukocyte | 3.92e-44 | 136 |
nongranular leukocyte | 7.24e-38 | 115 |
hematopoietic oligopotent progenitor cell | 2.24e-36 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-36 | 161 |
hematopoietic lineage restricted progenitor cell | 4.65e-36 | 120 |
hematopoietic stem cell | 1.30e-34 | 168 |
hematopoietic cell | 1.50e-32 | 177 |
granulocyte | 3.68e-17 | 8 |
basophil | 4.94e-17 | 3 |
mesenchymal cell | 3.71e-13 | 354 |
connective tissue cell | 8.90e-13 | 361 |
blood cell | 1.98e-12 | 11 |
eosinophil | 2.79e-12 | 2 |
motile cell | 1.94e-11 | 386 |
multi fate stem cell | 8.52e-10 | 427 |
somatic stem cell | 1.44e-09 | 433 |
stem cell | 2.82e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.38e-60 | 76 |
bone element | 3.06e-55 | 82 |
skeletal element | 7.12e-50 | 90 |
immune system | 4.26e-48 | 93 |
hematopoietic system | 2.25e-45 | 98 |
blood island | 2.25e-45 | 98 |
skeletal system | 2.33e-44 | 100 |
hemolymphoid system | 1.13e-40 | 108 |
musculoskeletal system | 2.58e-24 | 167 |
lateral plate mesoderm | 5.70e-19 | 203 |
connective tissue | 2.94e-12 | 371 |
mesoderm | 4.18e-10 | 315 |
mesoderm-derived structure | 4.18e-10 | 315 |
presumptive mesoderm | 4.18e-10 | 315 |