Personal tools

UBERON:0003497: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0003497
|alt_id=
|name=abdomen blood vessel
|namespace=
|def="A blood vessel that is part of an abdomen [Obol]." [OBOL:automatic]
|xref=MA:0000518
|is_a=UBERON:0003835
|synonym="blood vessel of abdomen" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of an abdomen [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003497
|is_a=UBERON:0003835
|is_obsolete=
|located_in=
|located_in=
|name=abdomen blood vessel
|namespace=
|obo_creation_date=
|part_of=UBERON:0000916
|part_of=UBERON:0000916
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="blood vessel of abdomen" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0000518
}}
}}

Revision as of 11:24, 12 September 2014

Name:abdomen blood vessel
Definition:"A blood vessel that is part of an abdomen [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000518
Synonyms: "blood vessel of abdomen" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003835(abdominal segment blood vessel)
part_of:UBERON:0000916(abdomen)



Children

is a:UBERON:0015796 (liver blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
  • 11831-124G4
  • 11832-124G5
  • 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
  • 13596-146E5 (liver sinusoidal endothelial cells, sham operation, biol_rep2)
  • 13597-146E6 (liver sinusoidal endothelial cells, sham operation, biol_rep3)
  • 13598-146E7 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep1)

... further results Mouse (Mus musculus)

  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
  • 11831-124G4
  • 11832-124G5
  • 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
  • 13596-146E5 (liver sinusoidal endothelial cells, sham operation, biol_rep2)
  • 13597-146E6 (liver sinusoidal endothelial cells, sham operation, biol_rep3)
  • 13598-146E7 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003497 (abdomen blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_26199b14e6e0aac5381128eb06f48d21p2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_26199b14e6e0aac5381128eb06f48d21p2@ENST00000448698
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_360ff1d377a096b2bad5a9581ec319c3p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_360ff1d377a096b2bad5a9581ec319c3p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_360ff1d377a096b2bad5a9581ec319c3p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_360ff1d377a096b2bad5a9581ec319c3p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_360ff1d377a096b2bad5a9581ec319c3p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_360ff1d377a096b2bad5a9581ec319c3p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_360ff1d377a096b2bad5a9581ec319c3p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_360ff1d377a096b2bad5a9581ec319c3p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_360ff1d377a096b2bad5a9581ec319c3p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_360ff1d377a096b2bad5a9581ec319c3p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_360ff1d377a096b2bad5a9581ec319c3p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_360ff1d377a096b2bad5a9581ec319c3p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_360ff1d377a096b2bad5a9581ec319c3p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_360ff1d377a096b2bad5a9581ec319c3p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_360ff1d377a096b2bad5a9581ec319c3p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_360ff1d377a096b2bad5a9581ec319c3p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_360ff1d377a096b2bad5a9581ec319c3p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_360ff1d377a096b2bad5a9581ec319c3p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_360ff1d377a096b2bad5a9581ec319c3p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_360ff1d377a096b2bad5a9581ec319c3p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_360ff1d377a096b2bad5a9581ec319c3p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_360ff1d377a096b2bad5a9581ec319c3p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_360ff1d377a096b2bad5a9581ec319c3p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_360ff1d377a096b2bad5a9581ec319c3p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_360ff1d377a096b2bad5a9581ec319c3p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_360ff1d377a096b2bad5a9581ec319c3p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_360ff1d377a096b2bad5a9581ec319c3p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_360ff1d377a096b2bad5a9581ec319c3p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_360ff1d377a096b2bad5a9581ec319c3p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_360ff1d377a096b2bad5a9581ec319c3p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_360ff1d377a096b2bad5a9581ec319c3p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_360ff1d377a096b2bad5a9581ec319c3p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_360ff1d377a096b2bad5a9581ec319c3p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_360ff1d377a096b2bad5a9581ec319c3p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_360ff1d377a096b2bad5a9581ec319c3p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_360ff1d377a096b2bad5a9581ec319c3p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_360ff1d377a096b2bad5a9581ec319c3p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_360ff1d377a096b2bad5a9581ec319c3p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_360ff1d377a096b2bad5a9581ec319c3p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_360ff1d377a096b2bad5a9581ec319c3p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_360ff1d377a096b2bad5a9581ec319c3p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_360ff1d377a096b2bad5a9581ec319c3p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_360ff1d377a096b2bad5a9581ec319c3p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_360ff1d377a096b2bad5a9581ec319c3p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_360ff1d377a096b2bad5a9581ec319c3p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_360ff1d377a096b2bad5a9581ec319c3p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_360ff1d377a096b2bad5a9581ec319c3p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_360ff1d377a096b2bad5a9581ec319c3p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_360ff1d377a096b2bad5a9581ec319c3p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_360ff1d377a096b2bad5a9581ec319c3p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_360ff1d377a096b2bad5a9581ec319c3p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_360ff1d377a096b2bad5a9581ec319c3p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_360ff1d377a096b2bad5a9581ec319c3p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_360ff1d377a096b2bad5a9581ec319c3p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_360ff1d377a096b2bad5a9581ec319c3p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_360ff1d377a096b2bad5a9581ec319c3p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_360ff1d377a096b2bad5a9581ec319c3p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_360ff1d377a096b2bad5a9581ec319c3p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_360ff1d377a096b2bad5a9581ec319c3p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_360ff1d377a096b2bad5a9581ec319c3p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_360ff1d377a096b2bad5a9581ec319c3p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_360ff1d377a096b2bad5a9581ec319c3p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_360ff1d377a096b2bad5a9581ec319c3p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_360ff1d377a096b2bad5a9581ec319c3p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_360ff1d377a096b2bad5a9581ec319c3p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_360ff1d377a096b2bad5a9581ec319c3p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_360ff1d377a096b2bad5a9581ec319c3p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_360ff1d377a096b2bad5a9581ec319c3p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_360ff1d377a096b2bad5a9581ec319c3p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_360ff1d377a096b2bad5a9581ec319c3p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_360ff1d377a096b2bad5a9581ec319c3p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_360ff1d377a096b2bad5a9581ec319c3p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_360ff1d377a096b2bad5a9581ec319c3p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_360ff1d377a096b2bad5a9581ec319c3p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_360ff1d377a096b2bad5a9581ec319c3p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_360ff1d377a096b2bad5a9581ec319c3p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_360ff1d377a096b2bad5a9581ec319c3p6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_360ff1d377a096b2bad5a9581ec319c3p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_360ff1d377a096b2bad5a9581ec319c3p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_360ff1d377a096b2bad5a9581ec319c3p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_360ff1d377a096b2bad5a9581ec319c3p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_360ff1d377a096b2bad5a9581ec319c3p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_360ff1d377a096b2bad5a9581ec319c3p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_360ff1d377a096b2bad5a9581ec319c3p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_360ff1d377a096b2bad5a9581ec319c3p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_360ff1d377a096b2bad5a9581ec319c3p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_360ff1d377a096b2bad5a9581ec319c3p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_360ff1d377a096b2bad5a9581ec319c3p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_360ff1d377a096b2bad5a9581ec319c3p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_360ff1d377a096b2bad5a9581ec319c3p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_360ff1d377a096b2bad5a9581ec319c3p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_360ff1d377a096b2bad5a9581ec319c3p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_360ff1d377a096b2bad5a9581ec319c3p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_360ff1d377a096b2bad5a9581ec319c3p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_360ff1d377a096b2bad5a9581ec319c3p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_360ff1d377a096b2bad5a9581ec319c3p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_360ff1d377a096b2bad5a9581ec319c3p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_360ff1d377a096b2bad5a9581ec319c3p@chrX:166418658..166418683, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003497&oldid=3274236"