CL:0000202: Difference between revisions
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|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=auditory | |name=auditory hair cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002227 | |part_of=UBERON:0002227 | ||
Latest revision as of 16:31, 12 September 2014
| Name: | auditory hair cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A mechanoreceptor cell located in the inner ear that is sensitive to auditory stimuli. The accessory sensory structures are arranged so that appropriate stimuli cause movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [MESH:A.08.663.650.250] | ||
| Xrefs: |
| ||
| Synonyms: |
"auditory receptor cell" EXACT [] "cochlear hair cell" EXACT [] "inner ear hair cell" EXACT [GO:0060119] "inner ear receptor cell" EXACT [GO:0060119] | ||
| Comments: | In mammals these cells are located in the organ of Corti. | ||
| Alt_id: | CL:0000201 |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000006(neuronal receptor cell),CL:0002374(ear hair cell),CL:0002491(auditory epithelial cell) |
|---|---|
| part_of: | UBERON:0002227(spiral organ of cochlea) |
Children
| is a: | CL:0000589 (cochlear inner hair cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000202 (auditory hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr5:72652671..72652676, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:36966993..36966996, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr3:127520184..127520191, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:36966723..36966734, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr9:87599703..87599714, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr8:94283075..94283082, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:64684505..64684512, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr9:87599703..87599714, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_11fa8e49030c043265c7b5924e6ceeae | p11@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_11fa8e49030c043265c7b5924e6ceeae | p7@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr15:91379135..91379143, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr13:31171742..31171745, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr19:10535924..10535927, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:142906965..142906982, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:53464193..53464197, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr10:18246142..18246145, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:53464193..53464197, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:36966993..36966996, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr11:114652018..114652020, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr18:66033513..66033517, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr4:106770202..106770208, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:64684637..64684654, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:64684637..64684654, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:12032746..12032751, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_11fa8e49030c043265c7b5924e6ceeae | p8@Col11a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr18:66033513..66033517, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_11fa8e49030c043265c7b5924e6ceeae | p10@Col11a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:142907424..142907448, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr13:31171742..31171745, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr15:91379135..91379143, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_11fa8e49030c043265c7b5924e6ceeae | p1@Zpld1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr15:97828021..97828028, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:64684692..64684697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:64684692..64684697, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:180335744..180335746, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_11fa8e49030c043265c7b5924e6ceeae | p1@Zpld1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr10:18246142..18246145, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_11fa8e49030c043265c7b5924e6ceeae | p11@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr5:72652671..72652676, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr4:106770202..106770208, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr19:10535924..10535927, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_11fa8e49030c043265c7b5924e6ceeae | p7@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:142906965..142906982, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_11fa8e49030c043265c7b5924e6ceeae | p24@Dctn1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr11:94371110..94371111, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_11fa8e49030c043265c7b5924e6ceeae | p3@Plscr5 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:36966723..36966734, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_11fa8e49030c043265c7b5924e6ceeae | p3@Plscr5 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_11fa8e49030c043265c7b5924e6ceeae | p8@Col11a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr15:97828021..97828028, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr11:94371110..94371111, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr8:94283075..94283082, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr17:15466888..15466898, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr3:127520184..127520191, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:12032746..12032751, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_11fa8e49030c043265c7b5924e6ceeae | p24@Dctn1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_11fa8e49030c043265c7b5924e6ceeae | p10@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:142907424..142907448, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr6:64684505..64684512, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_11fa8e49030c043265c7b5924e6ceeae | p@chr17:15466888..15466898, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr11:114652018..114652020, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_11fa8e49030c043265c7b5924e6ceeae | p@chr2:180335744..180335746, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr16:93971357..93971363, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr1:172843796..172843799, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr5:147854240..147854249, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr1:172843796..172843799, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr6:86746562..86746579, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr15:97806034..97806061, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr4:133802857..133802884, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_4094126718b698ad3dd1a47764dbdd97 | p3@Gipc3 |
| 2.74e-44 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr14:31283085..31283097, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_4094126718b698ad3dd1a47764dbdd97 | p2@Strc |
| 2.74e-44 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr3:58626291..58626298, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_4094126718b698ad3dd1a47764dbdd97 | p1@Tmc1 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr2:53464178..53464186, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr5:3909310..3909321, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_4094126718b698ad3dd1a47764dbdd97 | p10@Otof |
| 2.74e-44 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr3:154693281..154693317, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr13:78257518..78257522, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_4094126718b698ad3dd1a47764dbdd97 | p2@Gm1322 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_4094126718b698ad3dd1a47764dbdd97 | p21@Espn |
| 2.74e-44 | FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr14:63099970..63099980, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr12:13508015..13508019, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr12:13508046..13508055, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr11:94371127..94371139, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_4094126718b698ad3dd1a47764dbdd97 | p2@Tmprss3 |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr2:53464178..53464186, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr13:78257454..78257465, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_4094126718b698ad3dd1a47764dbdd97 | p3@Kncn |
| 2.74e-44 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr1:78523144..78523177, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_4094126718b698ad3dd1a47764dbdd97 | p12@B3galt5 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_4094126718b698ad3dd1a47764dbdd97 | p3@Kncn |
| 2.74e-44 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr15:89215319..89215330, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_4094126718b698ad3dd1a47764dbdd97 | p4@Chrna10 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr7:141605556..141605563, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr17:13983102..13983126, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr15:65641779..65641790, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr1:182528371..182528385, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_4094126718b698ad3dd1a47764dbdd97 | p@chr3:154459231..154459240, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_4094126718b698ad3dd1a47764dbdd97 | p@chr18:42158627..42158630, - |
