CL:0000311: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=keratin accumulating cell | |name=keratin accumulating cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:32, 12 September 2014
| Name: | keratin accumulating cell |
|---|---|
| Namespace: | FANTOM |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000325(stuff accumulating cell) |
|---|
Children
| is a: | CL:0000237 (keratinizing barrier epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11251-116E9 (Keratinocyte - oral, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11349-117G8 (Keratinocyte - epidermal, donor2)
- 11421-118F8 (Keratinocyte - epidermal, donor3)
Mouse (Mus musculus)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11251-116E9 (Keratinocyte - oral, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11349-117G8 (Keratinocyte - epidermal, donor2)
- 11421-118F8 (Keratinocyte - epidermal, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000311 (keratin accumulating cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-66 | FFCP PHASE1:Hg19::chr5:64369097..64369105,+#_2c4f371c92002f939e692023d05b465b | p@chr5:64369097..64369105, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr1:201288895..201288902,+#_2c4f371c92002f939e692023d05b465b | p@chr1:201288895..201288902, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr20:49727833..49727839,-#_2c4f371c92002f939e692023d05b465b | p@chr20:49727833..49727839, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr22:27043104..27043111,+#_2c4f371c92002f939e692023d05b465b | p27@MIAT |
| 2.83e-66 | FFCP PHASE2:Hg19::chr5:64369097..64369105,+#_2c4f371c92002f939e692023d05b465b | p@chr5:64369097..64369105, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr1:216595350..216595395,-#_2c4f371c92002f939e692023d05b465b | p@chr1:216595350..216595395, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr11:79659013..79659021,-#_2c4f371c92002f939e692023d05b465b | p@chr11:79659013..79659021, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr1:242843433..242843446,-#_2c4f371c92002f939e692023d05b465b | p@chr1:242843433..242843446, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr22:27043104..27043111,+#_2c4f371c92002f939e692023d05b465b | p27@MIAT |
| 2.83e-66 | FFCP PHASE2:Hg19::chr1:216595350..216595395,-#_2c4f371c92002f939e692023d05b465b | p@chr1:216595350..216595395, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr3:66452082..66452087,-#_2c4f371c92002f939e692023d05b465b | p@chr3:66452082..66452087, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr1:242843433..242843446,-#_2c4f371c92002f939e692023d05b465b | p@chr1:242843433..242843446, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr3:66452082..66452087,-#_2c4f371c92002f939e692023d05b465b | p@chr3:66452082..66452087, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr15:46610847..46610851,+#_2c4f371c92002f939e692023d05b465b | p@chr15:46610847..46610851, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr11:79659052..79659060,-#_2c4f371c92002f939e692023d05b465b | p@chr11:79659052..79659060, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr4:6356121..6356152,-#_2c4f371c92002f939e692023d05b465b | p@chr4:6356121..6356152, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr1:216196797..216196801,-#_2c4f371c92002f939e692023d05b465b | p@chr1:216196797..216196801, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr4:6356121..6356152,-#_2c4f371c92002f939e692023d05b465b | p@chr4:6356121..6356152, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr19:39401676..39401683,-#_2c4f371c92002f939e692023d05b465b | p@chr19:39401676..39401683, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr15:46610897..46610904,+#_2c4f371c92002f939e692023d05b465b | p@chr15:46610897..46610904, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr15:46610847..46610851,+#_2c4f371c92002f939e692023d05b465b | p@chr15:46610847..46610851, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr11:79659013..79659021,-#_2c4f371c92002f939e692023d05b465b | p@chr11:79659013..79659021, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr1:216196797..216196801,-#_2c4f371c92002f939e692023d05b465b | p@chr1:216196797..216196801, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr19:39401676..39401683,-#_2c4f371c92002f939e692023d05b465b | p@chr19:39401676..39401683, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr6:112466463..112466468,+#_2c4f371c92002f939e692023d05b465b | p@chr6:112466463..112466468, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr15:46610951..46610964,+#_2c4f371c92002f939e692023d05b465b | p@chr15:46610951..46610964, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr15:46610897..46610904,+#_2c4f371c92002f939e692023d05b465b | p@chr15:46610897..46610904, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr11:79659052..79659060,-#_2c4f371c92002f939e692023d05b465b | p@chr11:79659052..79659060, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr9:139089234..139089236,-#_2c4f371c92002f939e692023d05b465b | p@chr9:139089234..139089236, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr6:112466463..112466468,+#_2c4f371c92002f939e692023d05b465b | p@chr6:112466463..112466468, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr9:139089234..139089236,-#_2c4f371c92002f939e692023d05b465b | p@chr9:139089234..139089236, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr1:40770344..40770353,-#_2c4f371c92002f939e692023d05b465b | p29@COL9A2 |
| 2.83e-66 | FFCP PHASE2:Hg19::chr9:33719626..33719633,-#_2c4f371c92002f939e692023d05b465b | p@chr9:33719626..33719633, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr9:33719626..33719633,-#_2c4f371c92002f939e692023d05b465b | p@chr9:33719626..33719633, - |
| 2.83e-66 | FFCP PHASE1:Hg19::chr1:40770344..40770353,-#_2c4f371c92002f939e692023d05b465b | p29@COL9A2 |
| 2.83e-66 | FFCP PHASE2:Hg19::chr15:46610951..46610964,+#_2c4f371c92002f939e692023d05b465b | p@chr15:46610951..46610964, + |
| 2.83e-66 | FFCP PHASE2:Hg19::chr20:49727833..49727839,-#_2c4f371c92002f939e692023d05b465b | p@chr20:49727833..49727839, - |
| 2.83e-66 | FFCP PHASE2:Hg19::chr1:201288895..201288902,+#_2c4f371c92002f939e692023d05b465b | p@chr1:201288895..201288902, + |
| 4.55e-50 | FFCP PHASE2:Hg19::chr1:16090914..16090925,+#_2ac4df2bbb5027b3547a6c956e28253e | p22@FBLIM1 |
| 4.55e-50 | FFCP PHASE1:Hg19::chr1:16090914..16090925,+#_2ac4df2bbb5027b3547a6c956e28253e | p22@FBLIM1 |
| 9.76e-45 | FFCP PHASE1:Hg19::chr1:155048171..155048179,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr1:155048171..155048179, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr1:155048171..155048179,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr1:155048171..155048179, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr16:53653257..53653264,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr16:53653257..53653264, - |
| 9.76e-45 | FFCP PHASE2:Hg19::chr9:33719660..33719671,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr9:33719660..33719671, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr9:33719660..33719671,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr9:33719660..33719671, - |
| 9.76e-45 | FFCP PHASE2:Hg19::chr11:128634589..128634606,+#_c64aea010b06654a37dab851a5aaffc0 | p14@FLI1 |
| 9.76e-45 | FFCP PHASE1:Hg19::chr1:155048200..155048207,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr1:155048200..155048207, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr1:155048200..155048207,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr1:155048200..155048207, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr5:145722450..145722456,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr5:145722450..145722456, + |
| 9.76e-45 | FFCP PHASE1:Hg19::chr12:65175253..65175283,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr12:65175253..65175283, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr5:145722450..145722456,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr5:145722450..145722456, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr16:53653257..53653264,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr16:53653257..53653264, - |
| 9.76e-45 | FFCP PHASE2:Hg19::chr9:139096224..139096231,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr9:139096224..139096231, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr9:139096224..139096231,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr9:139096224..139096231, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr5:64369069..64369083,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr5:64369069..64369083, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr12:65175253..65175283,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr12:65175253..65175283, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr22:35921483..35921490,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr22:35921483..35921490, - |
| 9.76e-45 | FFCP PHASE2:Hg19::chr5:64369069..64369083,+#_c64aea010b06654a37dab851a5aaffc0 | p@chr5:64369069..64369083, + |
| 9.76e-45 | FFCP PHASE2:Hg19::chr22:35921483..35921490,-#_c64aea010b06654a37dab851a5aaffc0 | p@chr22:35921483..35921490, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr11:128634589..128634606,+#_c64aea010b06654a37dab851a5aaffc0 | p14@FLI1 |
| 1.22e-44 | FFCP PHASE1:Hg19::chr18:13165683..13165695,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr18:13165683..13165695, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr20:49727891..49727898,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr20:49727891..49727898, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr2:3152671..3152679,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr2:3152671..3152679, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr11:31312513..31312524,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr11:31312513..31312524, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr5:14742023..14742037,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr5:14742023..14742037, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr20:49727891..49727898,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr20:49727891..49727898, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr2:3152671..3152679,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr2:3152671..3152679, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr5:14742023..14742037,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr5:14742023..14742037, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr20:31116333..31116338,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr20:31116333..31116338, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr12:54786411..54786421,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr12:54786411..54786421, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr18:13165683..13165695,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr18:13165683..13165695, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr20:31116333..31116338,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr20:31116333..31116338, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr5:145724630..145724641,+#_f78f8b982f1b0c445640095141ccc0a1 | p@chr5:145724630..145724641, + |
| 1.22e-44 | FFCP PHASE2:Hg19::chr11:31312513..31312524,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr11:31312513..31312524, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr5:145724630..145724641,+#_f78f8b982f1b0c445640095141ccc0a1 | p@chr5:145724630..145724641, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr1:216286476..216286479,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr1:216286476..216286479, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr1:216286476..216286479,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr1:216286476..216286479, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr12:54786411..54786421,-#_f78f8b982f1b0c445640095141ccc0a1 | p@chr12:54786411..54786421, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr5:145724642..145724652,+#_f78f8b982f1b0c445640095141ccc0a1 | p@chr5:145724642..145724652, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr5:145724642..145724652,+#_f78f8b982f1b0c445640095141ccc0a1 | p@chr5:145724642..145724652, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr7:1327587..1327610,+#_368dcf44bdb3b241ee46aa384ac8f842 | p@chr7:1327587..1327610, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr7:1327587..1327610,+#_368dcf44bdb3b241ee46aa384ac8f842 | p@chr7:1327587..1327610, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr7:1327611..1327629,+#_368dcf44bdb3b241ee46aa384ac8f842 | p@chr7:1327611..1327629, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr7:1327611..1327629,+#_368dcf44bdb3b241ee46aa384ac8f842 | p@chr7:1327611..1327629, + |
| 1.52e-44 | FFCP PHASE1:Hg19::chr3:77121235..77121260,+#_368dcf44bdb3b241ee46aa384ac8f842 | p@chr3:77121235..77121260, + |
| 1.52e-44 | FFCP PHASE2:Hg19::chr3:77121235..77121260,+#_368dcf44bdb3b241ee46aa384ac8f842 | p@chr3:77121235..77121260, + |
| 5.62e-43 | FFCP PHASE2:Hg19::chr2:227008823..227008831,-#_6d81cf3c06cd0825113324943695f404 | p@chr2:227008823..227008831, - |
| 5.62e-43 | FFCP PHASE1:Hg19::chr2:227008823..227008831,-#_6d81cf3c06cd0825113324943695f404 | p@chr2:227008823..227008831, - |
| 1.33e-42 | FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_0e5cc5bcb7c4d43e4bc27818456ec603 | p3@GSDMC |
| 1.33e-42 | FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_0e5cc5bcb7c4d43e4bc27818456ec603 | p3@GSDMC |
| 7.14e-38 | FFCP PHASE2:Hg19::chr4:87770202..87770211,-#_4726c5f09d6e1c06f90d93148b90bbad | p5@SLC10A6 |
| 7.14e-38 | FFCP PHASE1:Hg19::chr4:87770202..87770211,-#_4726c5f09d6e1c06f90d93148b90bbad | p5@SLC10A6 |
| 2.34e-35 | FFCP PHASE2:Hg19::chr2:28785707..28785729,+#_3bc8a3ebf458ccd008959b9c6147e80f | p@chr2:28785707..28785729, + |
| 2.34e-35 | FFCP PHASE1:Hg19::chr2:28785707..28785729,+#_3bc8a3ebf458ccd008959b9c6147e80f | p@chr2:28785707..28785729, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr9:135433343..135433346,-#_aa7752baa1d84b8b2703bfabab9a2e9b | p@chr9:135433343..135433346, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr3:182129807..182129809,-#_aa7752baa1d84b8b2703bfabab9a2e9b | p@chr3:182129807..182129809, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr3:140784752..140784757,+#_aa7752baa1d84b8b2703bfabab9a2e9b | p10@SPSB4 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr9:38414152..38414168,-#_aa7752baa1d84b8b2703bfabab9a2e9b | p@chr9:38414152..38414168, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr3:182262882..182262922,-#_aa7752baa1d84b8b2703bfabab9a2e9b | p@chr3:182262882..182262922, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr5:145808948..145808956,+#_aa7752baa1d84b8b2703bfabab9a2e9b | p@chr5:145808948..145808956, + |
