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CL:0000569: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=cardiac mesenchymal cell
|name=cardiac mesenchymal cell
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000948
|part_of=UBERON:0000948

Latest revision as of 16:35, 12 September 2014

Name:cardiac mesenchymal cell
Namespace:FANTOM
Definition:"A mesenchymal cell found in the developing heart." [PMID:18816864]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000134(mesenchymal cell),CL:0002494(cardiocyte)
develops_from:CL:0000011(migratory trunk neural crest cell)
part_of:UBERON:0000948(heart)



Children


derives from:FF:0000271 (human cardiac mesenchymal precursor cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000569 (cardiac mesenchymal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data