CL:0000569: Difference between revisions
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|located_in= | |located_in= | ||
|name=cardiac mesenchymal cell | |name=cardiac mesenchymal cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000948 | |part_of=UBERON:0000948 |
Latest revision as of 16:35, 12 September 2014
Name: | cardiac mesenchymal cell |
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Namespace: | FANTOM |
Definition: | "A mesenchymal cell found in the developing heart." [PMID:18816864] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000134(mesenchymal cell),CL:0002494(cardiocyte) |
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develops_from: | CL:0000011(migratory trunk neural crest cell) |
part_of: | UBERON:0000948(heart) |
Children
derives from: | FF:0000271 (human cardiac mesenchymal precursor cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11752-123G6 (mesenchymal precursor cell - cardiac, donor1)
- 11753-123G7 (mesenchymal precursor cell - cardiac, donor2)
- 11754-123G8 (mesenchymal precursor cell - cardiac, donor3)
- 11755-123G9 (mesenchymal precursor cell - cardiac, donor4)
- 11839-124H3
Mouse (Mus musculus)
- 11752-123G6 (mesenchymal precursor cell - cardiac, donor1)
- 11753-123G7 (mesenchymal precursor cell - cardiac, donor2)
- 11754-123G8 (mesenchymal precursor cell - cardiac, donor3)
- 11755-123G9 (mesenchymal precursor cell - cardiac, donor4)
- 11839-124H3
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000569 (cardiac mesenchymal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data