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|located_in=
|located_in=
|name=mature NK T cell
|name=mature NK T cell
|namespace=cell;;efo
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:37, 12 September 2014

Name:mature NK T cell
Namespace:FANTOM
Definition:"A mature alpha-beta T cell of a distinct lineage that bears natural killer markers and a T cell receptor specific for a limited set of ligands. NK T cells have activation and regulatory roles particularly early in an immune response." [GOC:add, ISBN:0781735149]
Synonyms: "mature natural killer T cell" EXACT []
"mature natural killer T lymphocyte" EXACT []
"mature natural killer T-cell" EXACT []
"mature natural killer T-lymphocyte" EXACT []
"mature NK T lymphocyte" EXACT []
"mature NK T-cell" EXACT []
"mature NK T-lymphocyte" EXACT []
"mature NKT cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000791(mature alpha-beta T cell),CL:0002127(innate effector T cell)
develops_from:CL:0002042(immature NK T cell stage IV)



Children


is a:FF:10768-110F3 (),FF:10777-110G3 (NK T cell leukemia cell line:KHYG-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000814 (mature NK T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data