CL:0000878: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=central nervous system macrophage | |name=central nervous system macrophage | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001017 | |part_of=UBERON:0001017 | ||
Latest revision as of 16:38, 12 September 2014
| Name: | central nervous system macrophage |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A tissue-resident macrophage found in the central nervous system." [GO_REF:0000031, PMID:16322748] |
| Synonyms: | "CNS macrophage" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000864(tissue-resident macrophage),CL:0002319(neural cell) |
|---|---|
| part_of: | UBERON:0001017(central nervous system) |
Children
| is a: | CL:0000129 (microglial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11501-119F7
- 11641-122D3 (Mouse Microglia, donor3)
- 11662-122F6
- 11718-123C8 (Mouse Microglia, donor1)
- 11736-123E8 (Mouse Microglia, donor2)
Mouse (Mus musculus)
- 11501-119F7
- 11641-122D3 (Mouse Microglia, donor3)
- 11662-122F6
- 11718-123C8 (Mouse Microglia, donor1)
- 11736-123E8 (Mouse Microglia, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000878 (central nervous system macrophage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:112646729..112646768,+#_0000aedb54d2e39a1b038d271ff4dea4 | p@chr12:112646729..112646768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:113227136..113227143,+#_0000aedb54d2e39a1b038d271ff4dea4 | p@chr8:113227136..113227143, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:112646729..112646768,+#_0000aedb54d2e39a1b038d271ff4dea4 | p@chr12:112646729..112646768, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:113227136..113227143,+#_0000aedb54d2e39a1b038d271ff4dea4 | p@chr8:113227136..113227143, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr10:75403311..75403323,-#_6f7b5471adfdca3a201363b0e108014e | p3@ENSMUST00000059658, p3@uc007fts.1 |
| 1.68e-58 | FFCP PHASE2:Mm9::chr10:75403311..75403323,-#_6f7b5471adfdca3a201363b0e108014e | p3@ENSMUST00000059658, p3@uc007fts.1 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr15:88808274..88808289,-#_e374ee7b6103cf1754d65a25e7f69f12 | p@chr15:88808274..88808289, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr11:102749101..102749112,-#_e374ee7b6103cf1754d65a25e7f69f12 | p@chr11:102749101..102749112, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr15:88808274..88808289,-#_e374ee7b6103cf1754d65a25e7f69f12 | p@chr15:88808274..88808289, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr10:59862550..59862553,+#_e374ee7b6103cf1754d65a25e7f69f12 | p3@Gm17455 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr11:102749101..102749112,-#_e374ee7b6103cf1754d65a25e7f69f12 | p@chr11:102749101..102749112, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr10:59862550..59862553,+#_e374ee7b6103cf1754d65a25e7f69f12 | p3@Gm17455 |
| 2.75e-44 | FFCP PHASE1:Mm9::chr4:135525988..135526004,-#_4f88612466ab3fc6149c7514a2da4c49 | p@chr4:135525988..135526004, - |
| 2.75e-44 | FFCP PHASE2:Mm9::chr4:135525988..135526004,-#_4f88612466ab3fc6149c7514a2da4c49 | p@chr4:135525988..135526004, - |
| 4.55e-44 | FFCP PHASE1:Mm9::chr17:48934179..48934192,-#_b6506777b3a92b1ad8cdcc9f5ac0f0ad | p@chr17:48934179..48934192, - |
| 4.55e-44 | FFCP PHASE2:Mm9::chr17:48934179..48934192,-#_b6506777b3a92b1ad8cdcc9f5ac0f0ad | p@chr17:48934179..48934192, - |
| 7.52e-44 | FFCP PHASE1:Mm9::chr11:94506584..94506586,+#_4ebb798cac8043ce2cecb13241809d4b | p@chr11:94506584..94506586, + |
| 7.52e-44 | FFCP PHASE2:Mm9::chr11:94506584..94506586,+#_4ebb798cac8043ce2cecb13241809d4b | p@chr11:94506584..94506586, + |
| 4.23e-36 | FFCP PHASE1:Mm9::chr11:102749254..102749263,-#_92d754aabdc5e5d7d2b89fb8117c3dbf | p@chr11:102749254..102749263, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr11:102749254..102749263,-#_92d754aabdc5e5d7d2b89fb8117c3dbf | p@chr11:102749254..102749263, - |
| 2.13e-35 | FFCP PHASE1:Mm9::chr16:15895800..15895814,-#_7bf271adbaafcc0b24fd3cfeb4f67230 | p@chr16:15895800..15895814, - |
| 2.13e-35 | FFCP PHASE2:Mm9::chr16:15895800..15895814,-#_7bf271adbaafcc0b24fd3cfeb4f67230 | p@chr16:15895800..15895814, - |
| 4.75e-35 | FFCP PHASE2:Mm9::chr11:75244815..75244826,-#_65f73cafab2fb73ba70a3997de551f1d | p@chr11:75244815..75244826, - |
| 4.75e-35 | FFCP PHASE1:Mm9::chr11:75244815..75244826,-#_65f73cafab2fb73ba70a3997de551f1d | p@chr11:75244815..75244826, - |
| 1.73e-30 | FFCP PHASE1:Mm9::chr11:45567111..45567116,-#_096eef911f3979fa957430d42241f648 | p@chr11:45567111..45567116, - |
| 1.73e-30 | FFCP PHASE2:Mm9::chr11:45567111..45567116,-#_096eef911f3979fa957430d42241f648 | p@chr11:45567111..45567116, - |
| 3.41e-30 | FFCP PHASE2:Mm9::chr17:35822365..35822376,-#_f16923589134c47b64eea4006e01f8b0 | p@chr17:35822365..35822376, - |
| 3.41e-30 | FFCP PHASE1:Mm9::chr17:35822365..35822376,-#_f16923589134c47b64eea4006e01f8b0 | p@chr17:35822365..35822376, - |
| 3.41e-30 | FFCP PHASE2:Mm9::chr9:103595089..103595100,-#_f16923589134c47b64eea4006e01f8b0 | p4@Tmem108 |
| 3.41e-30 | FFCP PHASE1:Mm9::chr9:103595089..103595100,-#_f16923589134c47b64eea4006e01f8b0 | p4@Tmem108 |
| 4.77e-30 | FFCP PHASE2:Mm9::chr11:102754448..102754459,-#_16cf7d12d88051eb747a31ad85447532 | p@chr11:102754448..102754459, - |
| 4.77e-30 | FFCP PHASE1:Mm9::chr11:102754448..102754459,-#_16cf7d12d88051eb747a31ad85447532 | p@chr11:102754448..102754459, - |
| 6.69e-30 | FFCP PHASE1:Mm9::chr7:56865136..56865147,+#_1bf1a4f64578c4476148170a3d44ec8c | p@chr7:56865136..56865147, + |
| 6.69e-30 | FFCP PHASE2:Mm9::chr7:56865136..56865147,+#_1bf1a4f64578c4476148170a3d44ec8c | p@chr7:56865136..56865147, + |
| 1.31e-29 | FFCP PHASE1:Mm9::chr4:136452258..136452269,-#_4c9c1f56ec5c2281312aaf9c5e864961 | p@chr4:136452258..136452269, - |
| 1.31e-29 | FFCP PHASE2:Mm9::chr4:136452258..136452269,-#_4c9c1f56ec5c2281312aaf9c5e864961 | p@chr4:136452258..136452269, - |
| 1.78e-26 | FFCP PHASE1:Mm9::chr11:102754827..102754845,-#_f7cdfce51b04266e5af3519b6b5a2b78 | p@chr11:102754827..102754845, - |
| 1.78e-26 | FFCP PHASE2:Mm9::chr11:102754827..102754845,-#_f7cdfce51b04266e5af3519b6b5a2b78 | p@chr11:102754827..102754845, - |
| 2.38e-26 | FFCP PHASE1:Mm9::chr11:102750776..102750792,-#_0e20019a72d4509f5a28126ad910fa0b | p@chr11:102750776..102750792, - |
| 2.38e-26 | FFCP PHASE2:Mm9::chr11:102750776..102750792,-#_0e20019a72d4509f5a28126ad910fa0b | p@chr11:102750776..102750792, - |
| 4.27e-26 | FFCP PHASE1:Mm9::chr11:102807862..102807882,-#_c574b338cdecbcb46576841f68d07969 | p4@C1ql1 |
| 4.27e-26 | FFCP PHASE2:Mm9::chr11:102807862..102807882,-#_c574b338cdecbcb46576841f68d07969 | p4@C1ql1 |
| 7.61e-26 | FFCP PHASE1:Mm9::chr11:32036107..32036145,-#_493120c352bf05b58a4afc2d83a3130f | p@chr11:32036107..32036145, - |
| 7.61e-26 | FFCP PHASE2:Mm9::chr11:32036107..32036145,-#_493120c352bf05b58a4afc2d83a3130f | p@chr11:32036107..32036145, - |
| 1.02e-25 | FFCP PHASE2:Mm9::chr7:31844871..31844895,+#_4151d1e0e98406a17becea3ebbaefbdd | p9@Lgi4 |
| 1.02e-25 | FFCP PHASE1:Mm9::chr7:31844871..31844895,+#_4151d1e0e98406a17becea3ebbaefbdd | p9@Lgi4 |
| 1.35e-25 | FFCP PHASE1:Mm9::chr8:125951458..125951466,-#_327702307f67254ab2b3922949e2f78c | p@chr8:125951458..125951466, - |
| 1.35e-25 | FFCP PHASE2:Mm9::chr8:125951458..125951466,-#_327702307f67254ab2b3922949e2f78c | p@chr8:125951458..125951466, - |
| 1.35e-25 | FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_327702307f67254ab2b3922949e2f78c | p@chr8:28132545..28132551, + |
| 1.35e-25 | FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_327702307f67254ab2b3922949e2f78c | p@chr1:72873192..72873206, + |
| 1.35e-25 | FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_327702307f67254ab2b3922949e2f78c | p@chr8:28132545..28132551, + |
| 1.35e-25 | FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_327702307f67254ab2b3922949e2f78c | p@chr1:72873192..72873206, + |
| 1.8e-25 | FFCP PHASE2:Mm9::chr1:174128785..174128802,+#_aea1ba3ef9af39ffa5b9d54d265018b5 | p@chr1:174128785..174128802, + |
| 1.8e-25 | FFCP PHASE1:Mm9::chr1:174128785..174128802,+#_aea1ba3ef9af39ffa5b9d54d265018b5 | p@chr1:174128785..174128802, + |
| 1.8e-25 | FFCP PHASE2:Mm9::chr1:34754390..34754396,+#_aea1ba3ef9af39ffa5b9d54d265018b5 | p@chr1:34754390..34754396, + |
| 1.8e-25 | FFCP PHASE1:Mm9::chr1:34754390..34754396,+#_aea1ba3ef9af39ffa5b9d54d265018b5 | p@chr1:34754390..34754396, + |
| 3.19e-25 | FFCP PHASE1:Mm9::chr8:125952310..125952320,+#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125952310..125952320, + |
| 3.19e-25 | FFCP PHASE1:Mm9::chr8:125956332..125956339,-#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125956332..125956339, - |
| 3.19e-25 | FFCP PHASE1:Mm9::chr8:125951545..125951559,-#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125951545..125951559, - |
| 3.19e-25 | FFCP PHASE2:Mm9::chr8:125952002..125952012,-#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125952002..125952012, - |
| 3.19e-25 | FFCP PHASE2:Mm9::chr8:125952310..125952320,+#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125952310..125952320, + |
| 3.19e-25 | FFCP PHASE2:Mm9::chr8:125956332..125956339,-#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125956332..125956339, - |
| 3.19e-25 | FFCP PHASE2:Mm9::chr8:125951545..125951559,-#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125951545..125951559, - |
| 3.19e-25 | FFCP PHASE1:Mm9::chr8:125952002..125952012,-#_252c12ad9de4dd4dc6fe52621047ba1a | p@chr8:125952002..125952012, - |
| 5.1e-23 | FFCP PHASE2:Mm9::chr11:69414608..69414617,-#_504d308e832eb33838476916fe03ce64 | p@chr11:69414608..69414617, - |
| 5.1e-23 | FFCP PHASE1:Mm9::chr11:69414608..69414617,-#_504d308e832eb33838476916fe03ce64 | p@chr11:69414608..69414617, - |
| 8.47e-23 | FFCP PHASE2:Mm9::chr3:87067576..87067584,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p3@Fcrls |
| 8.47e-23 | FFCP PHASE1:Mm9::chr3:87067625..87067636,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p2@Fcrls |
| 8.47e-23 | FFCP PHASE1:Mm9::chr4:136452194..136452198,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p@chr4:136452194..136452198, - |
| 8.47e-23 | FFCP PHASE2:Mm9::chr4:136452194..136452198,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p@chr4:136452194..136452198, - |
| 8.47e-23 | FFCP PHASE1:Mm9::chr4:136436677..136436688,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p@chr4:136436677..136436688, - |
| 8.47e-23 | FFCP PHASE2:Mm9::chr4:136436677..136436688,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p@chr4:136436677..136436688, - |
| 8.47e-23 | FFCP PHASE2:Mm9::chr3:87067625..87067636,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p2@Fcrls |
| 8.47e-23 | FFCP PHASE1:Mm9::chr3:87067576..87067584,-#_ff9ca5b5ea0cabb399d13b7b282665c9 | p3@Fcrls |
| 9.5e-23 | FFCP PHASE2:Mm9::chr9:106363021..106363029,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p11@Pcbp4 |
| 9.5e-23 | FFCP PHASE2:Mm9::chr5:123689685..123689727,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p@chr5:123689685..123689727, + |
| 9.5e-23 | FFCP PHASE2:Mm9::chr19:6497758..6497764,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p17@Nrxn2 |
| 9.5e-23 | FFCP PHASE2:Mm9::chr17:24856898..24856901,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p3@Gm10420, p3@Gm5786, p3@Gm8842, p3@Rps2 |
| 9.5e-23 | FFCP PHASE1:Mm9::chr15:103345675..103345685,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p10@Pde1b |
| 9.5e-23 | FFCP PHASE1:Mm9::chr19:6497758..6497764,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p17@Nrxn2 |
| 9.5e-23 | FFCP PHASE1:Mm9::chr17:24856898..24856901,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p3@Gm10420, p3@Gm5786, p3@Gm8842, p3@Rps2 |
| 9.5e-23 | FFCP PHASE2:Mm9::chr15:103345675..103345685,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p10@Pde1b |
| 9.5e-23 | FFCP PHASE1:Mm9::chr8:96678044..96678046,-#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p@chr8:96678044..96678046, - |
| 9.5e-23 | FFCP PHASE1:Mm9::chr5:123689685..123689727,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p@chr5:123689685..123689727, + |
| 9.5e-23 | FFCP PHASE1:Mm9::chr9:106363021..106363029,+#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p11@Pcbp4 |
| 9.5e-23 | FFCP PHASE1:Mm9::chr8:87232404..87232415,-#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p22@Nfix |
| 9.5e-23 | FFCP PHASE2:Mm9::chr8:87232404..87232415,-#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p22@Nfix |
| 9.5e-23 | FFCP PHASE2:Mm9::chr8:96678044..96678046,-#_2354ddd9bc02a46a2a1aabe9ceab61d3 | p@chr8:96678044..96678046, - |
| 1.4e-22 | FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_49094d14597ed113696996afb683e872 | p@chr8:11006242..11006246, - |
| 1.4e-22 | FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_49094d14597ed113696996afb683e872 | p@chr8:11006242..11006246, - |
| 1.8e-22 | FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_97b3c2842158e33391cfc1f9cb9e88ca | p14@Slc3a2 |
| 1.8e-22 | FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_97b3c2842158e33391cfc1f9cb9e88ca | p14@Slc3a2 |
| 2.32e-22 | FFCP PHASE2:Mm9::chr11:69478859..69478867,-#_f24749497caeb0ab6e61560e00873b8e | p@chr11:69478859..69478867, - |
| 2.32e-22 | FFCP PHASE2:Mm9::chr6:48997958..48997979,-#_f24749497caeb0ab6e61560e00873b8e | p@chr6:48997958..48997979, - |
| 2.32e-22 | FFCP PHASE1:Mm9::chr11:69478859..69478867,-#_f24749497caeb0ab6e61560e00873b8e | p@chr11:69478859..69478867, - |
| 2.32e-22 | FFCP PHASE1:Mm9::chr6:48997958..48997979,-#_f24749497caeb0ab6e61560e00873b8e | p@chr6:48997958..48997979, - |
| 2.97e-22 | FFCP PHASE1:Mm9::chr1:173164773..173164781,-#_5e74f27acb80d8c6a8214d74a9f88d34 | p3@Fcer1g |
| 2.97e-22 | FFCP PHASE2:Mm9::chr1:173164773..173164781,-#_5e74f27acb80d8c6a8214d74a9f88d34 | p3@Fcer1g |
| 4.07e-21 | FFCP PHASE2:Mm9::chr11:102749020..102749031,-#_844b866cd3eeaf933ad4ef94fefadce2 | p@chr11:102749020..102749031, - |
| 4.07e-21 | FFCP PHASE1:Mm9::chr11:102749020..102749031,-#_844b866cd3eeaf933ad4ef94fefadce2 | p@chr11:102749020..102749031, - |
