CL:0002536: Difference between revisions
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|located_in= | |located_in= | ||
|name=amniotic epithelial cell | |name=amniotic epithelial cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-02-28T12:38:01Z | |obo_creation_date=2011-02-28T12:38:01Z | ||
|part_of=UBERON:0000305 | |part_of=UBERON:0000305 | ||
Latest revision as of 16:43, 12 September 2014
| Name: | amniotic epithelial cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "An epithelial cell that is part of the amnion." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T12:38:01Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0000349(extraembryonic cell) |
|---|---|
| part_of: | UBERON:0000305(amnion) |
Children
| derives from: | FF:0000009 (human amniotic epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
Mouse (Mus musculus)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002536 (amniotic epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:209704633..209704641,+#_066c6329507c9b02a7fa29c4baa30956 | p@chr1:209704633..209704641, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:209704633..209704641,+#_066c6329507c9b02a7fa29c4baa30956 | p@chr1:209704633..209704641, + |
| 1.56e-79 | FFCP PHASE1:Hg19::chr1:209704648..209704656,+#_5b14b07f1f57f3e8ba1fff97c8aeefca | p@chr1:209704648..209704656, + |
| 1.56e-79 | FFCP PHASE2:Hg19::chr1:209704648..209704656,+#_5b14b07f1f57f3e8ba1fff97c8aeefca | p@chr1:209704648..209704656, + |
| 2.34e-79 | FFCP PHASE1:Hg19::chr1:209704573..209704587,+#_2c1fe1a394323c4373ff5791bc8a4058 | p@chr1:209704573..209704587, + |
| 2.34e-79 | FFCP PHASE2:Hg19::chr1:209704573..209704587,+#_2c1fe1a394323c4373ff5791bc8a4058 | p@chr1:209704573..209704587, + |
| 7.41e-67 | FFCP PHASE1:Hg19::chr2:161057428..161057450,-#_232755a05166b86418a430d82741a378 | p@chr2:161057428..161057450, - |
| 7.41e-67 | FFCP PHASE1:Hg19::chr1:209704612..209704625,+#_232755a05166b86418a430d82741a378 | p@chr1:209704612..209704625, + |
| 7.41e-67 | FFCP PHASE2:Hg19::chr2:161057428..161057450,-#_232755a05166b86418a430d82741a378 | p@chr2:161057428..161057450, - |
| 7.41e-67 | FFCP PHASE2:Hg19::chr1:209704612..209704625,+#_232755a05166b86418a430d82741a378 | p@chr1:209704612..209704625, + |
| 1.04e-66 | FFCP PHASE2:Hg19::chr3:55384353..55384357,+#_f17000615815df2c43829a18b9d3df17 | p@chr3:55384353..55384357, + |
| 1.04e-66 | FFCP PHASE1:Hg19::chr3:55384353..55384357,+#_f17000615815df2c43829a18b9d3df17 | p@chr3:55384353..55384357, + |
| 2.84e-66 | FFCP PHASE1:Hg19::chr5:89143573..89143607,-#_659202826281678384e47799a903b431 | p@chr5:89143573..89143607, - |
| 2.84e-66 | FFCP PHASE2:Hg19::chr5:89143573..89143607,-#_659202826281678384e47799a903b431 | p@chr5:89143573..89143607, - |
| 1.08e-65 | FFCP PHASE2:Hg19::chr19:1584972..1584977,-#_edc04fbf55195b5d2f965523afd97e62 | p5@M77818 |
| 1.08e-65 | FFCP PHASE1:Hg19::chr19:1584972..1584977,-#_edc04fbf55195b5d2f965523afd97e62 | p5@M77818 |
| 2.02e-57 | FFCP PHASE1:Hg19::chr5:170176045..170176055,-#_bdcb9523b1d4a008b98eaa654ce7d475 | p@chr5:170176045..170176055, - |
| 2.02e-57 | FFCP PHASE2:Hg19::chr5:170176045..170176055,-#_bdcb9523b1d4a008b98eaa654ce7d475 | p@chr5:170176045..170176055, - |
| 3.58e-57 | FFCP PHASE1:Hg19::chr2:237683020..237683029,+#_f4ff4dc7955060186c44401c3466c706 | p@chr2:237683020..237683029, + |
| 3.58e-57 | FFCP PHASE2:Hg19::chr2:237683109..237683120,+#_f4ff4dc7955060186c44401c3466c706 | p@chr2:237683109..237683120, + |
| 3.58e-57 | FFCP PHASE1:Hg19::chr2:237683109..237683120,+#_f4ff4dc7955060186c44401c3466c706 | p@chr2:237683109..237683120, + |
| 3.58e-57 | FFCP PHASE2:Hg19::chr2:237683020..237683029,+#_f4ff4dc7955060186c44401c3466c706 | p@chr2:237683020..237683029, + |
| 4.77e-57 | FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_2fd07104c77a4dd9a5f8ce4607577557 | p@chr9:88126069..88126080, - |
| 4.77e-57 | FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_2fd07104c77a4dd9a5f8ce4607577557 | p@chr9:88126069..88126080, - |
| 6.36e-57 | FFCP PHASE2:Hg19::chr8:29452974..29452996,+#_81dd2bc5e11f842f462c65894afa1975 | p@chr8:29452974..29452996, + |
| 6.36e-57 | FFCP PHASE1:Hg19::chr8:29452974..29452996,+#_81dd2bc5e11f842f462c65894afa1975 | p@chr8:29452974..29452996, + |
| 8.47e-57 | FFCP PHASE2:Hg19::chr5:170239966..170239982,+#_3fb0c195c6b05980a399fd4878bf8ac7 | p@chr5:170239966..170239982, + |
| 8.47e-57 | FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_3fb0c195c6b05980a399fd4878bf8ac7 | p@chr14:104202639..104202646, - |
| 8.47e-57 | FFCP PHASE1:Hg19::chr20:61288249..61288259,+#_3fb0c195c6b05980a399fd4878bf8ac7 | p12@SLCO4A1 |
| 8.47e-57 | FFCP PHASE2:Hg19::chr20:61288249..61288259,+#_3fb0c195c6b05980a399fd4878bf8ac7 | p12@SLCO4A1 |
| 8.47e-57 | FFCP PHASE2:Hg19::chrX:48374277..48374289,+#_3fb0c195c6b05980a399fd4878bf8ac7 | p@chrX:48374277..48374289, + |
| 8.47e-57 | FFCP PHASE1:Hg19::chrX:48374277..48374289,+#_3fb0c195c6b05980a399fd4878bf8ac7 | p@chrX:48374277..48374289, + |
| 8.47e-57 | FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_3fb0c195c6b05980a399fd4878bf8ac7 | p@chr14:104202639..104202646, - |
| 8.47e-57 | FFCP PHASE1:Hg19::chr5:170239966..170239982,+#_3fb0c195c6b05980a399fd4878bf8ac7 | p@chr5:170239966..170239982, + |
| 1.13e-56 | FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_741355b57dfbacd07edf7295c0f5005d | p@chr10:131344593..131344605, + |
| 1.13e-56 | FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_741355b57dfbacd07edf7295c0f5005d | p@chr10:131344593..131344605, + |
| 8.82e-51 | FFCP PHASE2:Hg19::chr2:95983133..95983144,+#_c70ef0730ec46954e2f5e1ff273dbcac | p@chr2:95983133..95983144, + |
| 8.82e-51 | FFCP PHASE1:Hg19::chr2:95983133..95983144,+#_c70ef0730ec46954e2f5e1ff273dbcac | p@chr2:95983133..95983144, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_2b1449cf9d62cdb046a61eb0a9ddcb63 | p@chr2:237683203..237683210, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_2b1449cf9d62cdb046a61eb0a9ddcb63 | p@chr2:237683203..237683210, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr12:8802094..8802097,-#_c713ba9fb5613e4d534ddc59676044c0 | p@chr12:8802094..8802097, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr12:8802094..8802097,-#_c713ba9fb5613e4d534ddc59676044c0 | p@chr12:8802094..8802097, - |
| 4.0e-50 | FFCP PHASE2:Hg19::chr11:5626359..5626406,+#_456505379a7a29f6ba9d31375dfc9e81 | p8@TRIM6 |
| 4.0e-50 | FFCP PHASE1:Hg19::chr11:5626359..5626406,+#_456505379a7a29f6ba9d31375dfc9e81 | p8@TRIM6 |
| 5.15e-50 | FFCP PHASE1:Hg19::chr3:146323019..146323049,-#_543b761cb5504eac123d87f8fb6d5826 | p1@PLSCR5 |
| 5.15e-50 | FFCP PHASE1:Hg19::chr4:177592751..177592777,-#_543b761cb5504eac123d87f8fb6d5826 | p@chr4:177592751..177592777, - |
| 5.15e-50 | FFCP PHASE2:Hg19::chr4:177592751..177592777,-#_543b761cb5504eac123d87f8fb6d5826 | p@chr4:177592751..177592777, - |
| 5.15e-50 | FFCP PHASE2:Hg19::chr3:146323019..146323049,-#_543b761cb5504eac123d87f8fb6d5826 | p1@PLSCR5 |
| 1.22e-44 | FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_67bc33a05364f2f9c2856ccbd0ca46a3 | p@chr19:36592910..36592917, + |
| 1.22e-44 | FFCP PHASE2:Hg19::chr3:123512689..123512717,-#_67bc33a05364f2f9c2856ccbd0ca46a3 | p36@MYLK |
| 1.22e-44 | FFCP PHASE2:Hg19::chr2:25862154..25862172,-#_67bc33a05364f2f9c2856ccbd0ca46a3 | p14@DTNB |
| 1.22e-44 | FFCP PHASE1:Hg19::chr3:123512689..123512717,-#_67bc33a05364f2f9c2856ccbd0ca46a3 | p36@MYLK |
| 1.22e-44 | FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_67bc33a05364f2f9c2856ccbd0ca46a3 | p@chr19:36592910..36592917, + |
| 1.22e-44 | FFCP PHASE1:Hg19::chr2:25862154..25862172,-#_67bc33a05364f2f9c2856ccbd0ca46a3 | p14@DTNB |
| 2.98e-44 | FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_4ab3695feee7face5e4d3ac51ca2f172 | p@chr2:237682972..237682977, + |
| 2.98e-44 | FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_4ab3695feee7face5e4d3ac51ca2f172 | p@chr2:237682972..237682977, + |
| 3.72e-44 | FFCP PHASE1:Hg19::chr2:191897854..191897865,-#_17f858212328a22ff89c70ad8a2b5ff1 | p@chr2:191897854..191897865, - |
| 3.72e-44 | FFCP PHASE2:Hg19::chr2:191897854..191897865,-#_17f858212328a22ff89c70ad8a2b5ff1 | p@chr2:191897854..191897865, - |
| 8.98e-41 | FFCP PHASE2:Hg19::chr1:147232729..147232730,-#_f547c02980519224a6e5334fb1451b3e | p9@GJA5 |
| 8.98e-41 | FFCP PHASE1:Hg19::chr1:147232729..147232730,-#_f547c02980519224a6e5334fb1451b3e | p9@GJA5 |
| 8.98e-41 | FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_f547c02980519224a6e5334fb1451b3e | p3@GRAMD2 |
| 8.98e-41 | FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_f547c02980519224a6e5334fb1451b3e | p3@GRAMD2 |
| 1.34e-40 | FFCP PHASE2:Hg19::chr2:237683038..237683048,+#_bd4d8edeea314a2a5d3a590758a9cc10 | p@chr2:237683038..237683048, + |
| 1.34e-40 | FFCP PHASE1:Hg19::chr2:237683038..237683048,+#_bd4d8edeea314a2a5d3a590758a9cc10 | p@chr2:237683038..237683048, + |
| 1.34e-40 | FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_bd4d8edeea314a2a5d3a590758a9cc10 | p@chr19:36592959..36592975, + |
| 1.34e-40 | FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_bd4d8edeea314a2a5d3a590758a9cc10 | p@chr19:36592959..36592975, + |
| 1.64e-40 | FFCP PHASE1:Hg19::chr17:38632125..38632156,-#_cf6afe7bbd2e6d3223e5e3ff012ff7b7 | p@chr17:38632125..38632156, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr17:38632125..38632156,-#_cf6afe7bbd2e6d3223e5e3ff012ff7b7 | p@chr17:38632125..38632156, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_cf6afe7bbd2e6d3223e5e3ff012ff7b7 | p@chr19:36592982..36592993, + |
| 1.64e-40 | FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_cf6afe7bbd2e6d3223e5e3ff012ff7b7 | p@chr19:36592982..36592993, + |
| 3.01e-40 | FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_8df20f6d20e43de135437c69882e7d9d | p@chr18:6286777..6286797, + |
| 3.01e-40 | FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_8df20f6d20e43de135437c69882e7d9d | p@chr18:6286777..6286797, + |
| 4.73e-37 | FFCP PHASE1:Hg19::chr16:81679150..81679182,+#_47973a2623425b908af566675d6a5fd9 | p17@CMIP |
| 4.73e-37 | FFCP PHASE2:Hg19::chr16:81679150..81679182,+#_47973a2623425b908af566675d6a5fd9 | p17@CMIP |
| 5.69e-37 | FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_cd7c0a895cf9def9e902093af2564aa1 | p@chr2:28853455..28853476, + |
| 5.69e-37 | FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_cd7c0a895cf9def9e902093af2564aa1 | p@chr2:28853455..28853476, + |
| 1.18e-36 | FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_19857938300699242eace3c01a4c78bf | p@chr6:12161831..12161855, + |
| 1.18e-36 | FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_19857938300699242eace3c01a4c78bf | p@chr6:12161831..12161855, + |
| 1.42e-36 | FFCP PHASE2:Hg19::chr2:75796837..75796849,-#_f5223f8cf79dd2f2e793304b95c6277e | p6@FAM176A |
| 1.42e-36 | FFCP PHASE1:Hg19::chr2:75796837..75796849,-#_f5223f8cf79dd2f2e793304b95c6277e | p6@FAM176A |
| 1.42e-36 | FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_f5223f8cf79dd2f2e793304b95c6277e | p4@SLCO4A1 |
| 1.42e-36 | FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_f5223f8cf79dd2f2e793304b95c6277e | p4@SLCO4A1 |
| 1.42e-36 | FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_f5223f8cf79dd2f2e793304b95c6277e | p@chr2:62257232..62257274, + |
| 1.42e-36 | FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_f5223f8cf79dd2f2e793304b95c6277e | p@chr2:62257232..62257274, + |
| 2.18e-34 | FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_850526cb2172774dd8ab722526c65802 | p@chr2:237683156..237683171, + |
| 2.18e-34 | FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_850526cb2172774dd8ab722526c65802 | p@chr2:237683156..237683171, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:170210042..170210086,-#_75fc1c951a91a3d1879fe7925d4136a5 | p@chr5:170210042..170210086, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:170210042..170210086,-#_75fc1c951a91a3d1879fe7925d4136a5 | p@chr5:170210042..170210086, - |
| 5.07e-34 | FFCP PHASE1:Hg19::chr5:153855212..153855222,-#_99d63b39d781b0b8fd0760ef0cc5e1a6 | p@chr5:153855212..153855222, - |
| 5.07e-34 | FFCP PHASE2:Hg19::chr5:153855212..153855222,-#_99d63b39d781b0b8fd0760ef0cc5e1a6 | p@chr5:153855212..153855222, - |
| 6.0e-34 | FFCP PHASE2:Hg19::chr2:43266741..43266748,-#_8262b961901ee30a9d8ec7657493b8dd | p2@ENST00000449766 |
| 6.0e-34 | FFCP PHASE1:Hg19::chr2:43266741..43266748,-#_8262b961901ee30a9d8ec7657493b8dd | p2@ENST00000449766 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:107729876..107729881,-#_bd561f2bf9e80ab9125edb44eae7e4af | p10@SLC35F2 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:107729876..107729881,-#_bd561f2bf9e80ab9125edb44eae7e4af | p10@SLC35F2 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr14:61952109..61952155,+#_bd561f2bf9e80ab9125edb44eae7e4af | p@chr14:61952109..61952155, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr14:61952109..61952155,+#_bd561f2bf9e80ab9125edb44eae7e4af | p@chr14:61952109..61952155, + |
| 1.39e-33 | FFCP PHASE1:Hg19::chr5:153858071..153858085,+#_a0697d7738d2c91f1da616997615dd1a | p@chr5:153858071..153858085, + |
| 1.39e-33 | FFCP PHASE2:Hg19::chr5:153858071..153858085,+#_a0697d7738d2c91f1da616997615dd1a | p@chr5:153858071..153858085, + |
| 1.93e-33 | FFCP PHASE1:Hg19::chr13:114542805..114542816,-#_e42cb4fd49a99917d0e1fa5ea6e09c02 | p@chr13:114542805..114542816, - |
| 1.93e-33 | FFCP PHASE2:Hg19::chr13:114542805..114542816,-#_e42cb4fd49a99917d0e1fa5ea6e09c02 | p@chr13:114542805..114542816, - |
