CL:1000415: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=epithelial cell of gall bladder | |name=epithelial cell of gall bladder | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002110 | |part_of=UBERON:0002110 | ||
Latest revision as of 16:46, 12 September 2014
| Name: | epithelial cell of gall bladder | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelial cell that is part of the gallbladder." [GOC:tfm] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|---|
| part_of: | UBERON:0002110(gallbladder) |
Children
| is a: | FF:10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB),FF:10470-106I2 (gall bladder carcinoma cell line:TGBC14TKB) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)
- 10470-106I2 (gall bladder carcinoma cell line:TGBC14TKB)
Mouse (Mus musculus)
- 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)
- 10470-106I2 (gall bladder carcinoma cell line:TGBC14TKB)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000415 (epithelial cell of gall bladder), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:42157397..42157411,-#_468576932cc524f05f3c21e4536e8299 | p@chr2:42157397..42157411, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:189258158..189258183,-#_468576932cc524f05f3c21e4536e8299 | p@chr4:189258158..189258183, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:117626532..117626537,+#_468576932cc524f05f3c21e4536e8299 | p@chr4:117626532..117626537, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:4100562..4100570,+#_468576932cc524f05f3c21e4536e8299 | p4@BC027448 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:38091563..38091607,+#_468576932cc524f05f3c21e4536e8299 | p@chr14:38091563..38091607, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:38091563..38091607,+#_468576932cc524f05f3c21e4536e8299 | p@chr14:38091563..38091607, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:103952998..103953003,-#_468576932cc524f05f3c21e4536e8299 | p@chr10:103952998..103953003, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:95737958..95737978,+#_468576932cc524f05f3c21e4536e8299 | p@chr9:95737958..95737978, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:2351233..2351242,+#_468576932cc524f05f3c21e4536e8299 | p@chr18:2351233..2351242, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:145127555..145127558,+#_468576932cc524f05f3c21e4536e8299 | p@chr3:145127555..145127558, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:4100596..4100603,+#_468576932cc524f05f3c21e4536e8299 | p5@BC027448 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:103952998..103953003,-#_468576932cc524f05f3c21e4536e8299 | p@chr10:103952998..103953003, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:117626532..117626537,+#_468576932cc524f05f3c21e4536e8299 | p@chr4:117626532..117626537, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:42157172..42157179,-#_468576932cc524f05f3c21e4536e8299 | p@chr2:42157172..42157179, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:145127555..145127558,+#_468576932cc524f05f3c21e4536e8299 | p@chr3:145127555..145127558, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:95737958..95737978,+#_468576932cc524f05f3c21e4536e8299 | p@chr9:95737958..95737978, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr18:2351233..2351242,+#_468576932cc524f05f3c21e4536e8299 | p@chr18:2351233..2351242, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:42157397..42157411,-#_468576932cc524f05f3c21e4536e8299 | p@chr2:42157397..42157411, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:189258158..189258183,-#_468576932cc524f05f3c21e4536e8299 | p@chr4:189258158..189258183, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:4100562..4100570,+#_468576932cc524f05f3c21e4536e8299 | p4@BC027448 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:25649889..25649911,-#_468576932cc524f05f3c21e4536e8299 | p@chr5:25649889..25649911, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:42157172..42157179,-#_468576932cc524f05f3c21e4536e8299 | p@chr2:42157172..42157179, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:25649889..25649911,-#_468576932cc524f05f3c21e4536e8299 | p@chr5:25649889..25649911, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:4100596..4100603,+#_468576932cc524f05f3c21e4536e8299 | p5@BC027448 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr17:67559529..67559532,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr17:67559529..67559532, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr5:147645292..147645302,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr5:147645292..147645302, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr21:28226981..28227000,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr21:28226981..28227000, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr9:95737369..95737393,+#_116ac61170d3bc4bc38c45adbf17f047 | p18@FGD3 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr18:2351165..2351175,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr18:2351165..2351175, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr4:190861941..190861951,+#_116ac61170d3bc4bc38c45adbf17f047 | p3@FRG1 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr19:28401158..28401162,-#_116ac61170d3bc4bc38c45adbf17f047 | p@chr19:28401158..28401162, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr9:95737369..95737393,+#_116ac61170d3bc4bc38c45adbf17f047 | p18@FGD3 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr18:35871337..35871346,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr18:35871337..35871346, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr7:114026271..114026287,-#_116ac61170d3bc4bc38c45adbf17f047 | p@chr7:114026271..114026287, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr6:13191432..13191436,-#_116ac61170d3bc4bc38c45adbf17f047 | p@chr6:13191432..13191436, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chrX:29431271..29431280,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chrX:29431271..29431280, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr17:67559529..67559532,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr17:67559529..67559532, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr18:2351165..2351175,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr18:2351165..2351175, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr4:190861941..190861951,+#_116ac61170d3bc4bc38c45adbf17f047 | p3@FRG1 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr19:28401158..28401162,-#_116ac61170d3bc4bc38c45adbf17f047 | p@chr19:28401158..28401162, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr11:86501763..86501768,+#_116ac61170d3bc4bc38c45adbf17f047 | p33@PRSS23 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr5:147644551..147644576,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr5:147644551..147644576, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr11:86501763..86501768,+#_116ac61170d3bc4bc38c45adbf17f047 | p33@PRSS23 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr18:35871337..35871346,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr18:35871337..35871346, + |
| 2.74e-50 | FFCP PHASE2:Hg19::chr6:13191432..13191436,-#_116ac61170d3bc4bc38c45adbf17f047 | p@chr6:13191432..13191436, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr12:113448406..113448411,+#_116ac61170d3bc4bc38c45adbf17f047 | p14@OAS2 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr10:124050589..124050596,+#_116ac61170d3bc4bc38c45adbf17f047 | p15@BTBD16 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr21:28226981..28227000,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr21:28226981..28227000, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr12:113448406..113448411,+#_116ac61170d3bc4bc38c45adbf17f047 | p14@OAS2 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr5:147644551..147644576,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr5:147644551..147644576, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr5:147645292..147645302,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chr5:147645292..147645302, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr10:124050589..124050596,+#_116ac61170d3bc4bc38c45adbf17f047 | p15@BTBD16 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr7:114026271..114026287,-#_116ac61170d3bc4bc38c45adbf17f047 | p@chr7:114026271..114026287, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chrX:29431271..29431280,+#_116ac61170d3bc4bc38c45adbf17f047 | p@chrX:29431271..29431280, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr4:175184051..175184061,-#_e26a051c8084f2ef25d2dba071625578 | p18@FBXO8 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr17:68643476..68643477,+#_e26a051c8084f2ef25d2dba071625578 | p@chr17:68643476..68643477, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr19:36757642..36757645,+#_e26a051c8084f2ef25d2dba071625578 | p@chr19:36757642..36757645, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr2:120974061..120974068,-#_e26a051c8084f2ef25d2dba071625578 | p3@ENST00000455707 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:66497726..66497737,-#_e26a051c8084f2ef25d2dba071625578 | p@chr6:66497726..66497737, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr12:127102703..127102711,-#_e26a051c8084f2ef25d2dba071625578 | p@chr12:127102703..127102711, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr4:175184241..175184250,-#_e26a051c8084f2ef25d2dba071625578 | p14@FBXO8 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_e26a051c8084f2ef25d2dba071625578 | p@chr4:59982412..59982425, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr18:61420303..61420306,+#_e26a051c8084f2ef25d2dba071625578 | p17@SERPINB7 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr12:127102703..127102711,-#_e26a051c8084f2ef25d2dba071625578 | p@chr12:127102703..127102711, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr19:36757642..36757645,+#_e26a051c8084f2ef25d2dba071625578 | p@chr19:36757642..36757645, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr2:120974061..120974068,-#_e26a051c8084f2ef25d2dba071625578 | p3@ENST00000455707 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:37852067..37852074,-#_e26a051c8084f2ef25d2dba071625578 | p@chr5:37852067..37852074, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr16:34378161..34378168,+#_e26a051c8084f2ef25d2dba071625578 | p@chr16:34378161..34378168, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr14:47289644..47289662,-#_e26a051c8084f2ef25d2dba071625578 | p@chr14:47289644..47289662, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr14:47289644..47289662,-#_e26a051c8084f2ef25d2dba071625578 | p@chr14:47289644..47289662, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:66497726..66497737,-#_e26a051c8084f2ef25d2dba071625578 | p@chr6:66497726..66497737, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr4:175184241..175184250,-#_e26a051c8084f2ef25d2dba071625578 | p14@FBXO8 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr17:68643476..68643477,+#_e26a051c8084f2ef25d2dba071625578 | p@chr17:68643476..68643477, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:106851639..106851650,-#_e26a051c8084f2ef25d2dba071625578 | p@chr3:106851639..106851650, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr4:175184051..175184061,-#_e26a051c8084f2ef25d2dba071625578 | p18@FBXO8 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:37852067..37852074,-#_e26a051c8084f2ef25d2dba071625578 | p@chr5:37852067..37852074, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_e26a051c8084f2ef25d2dba071625578 | p@chr4:59982412..59982425, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr18:61420303..61420306,+#_e26a051c8084f2ef25d2dba071625578 | p17@SERPINB7 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr16:34378161..34378168,+#_e26a051c8084f2ef25d2dba071625578 | p@chr16:34378161..34378168, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:106851639..106851650,-#_e26a051c8084f2ef25d2dba071625578 | p@chr3:106851639..106851650, - |
| 1.91e-44 | FFCP PHASE2:Hg19::chr13:55820923..55820933,+#_cc695711ad8401c6f95b54e09b519bed | p@chr13:55820923..55820933, + |
| 1.91e-44 | FFCP PHASE1:Hg19::chr13:55820923..55820933,+#_cc695711ad8401c6f95b54e09b519bed | p@chr13:55820923..55820933, + |
| 3.94e-37 | FFCP PHASE1:Hg19::chr3:153807386..153807397,-#_b9fa6213bad02519b06f324c22387650 | p@chr3:153807386..153807397, - |
| 3.94e-37 | FFCP PHASE2:Hg19::chr3:153807386..153807397,-#_b9fa6213bad02519b06f324c22387650 | p@chr3:153807386..153807397, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr10:73818867..73818877,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr10:73818867..73818877, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:146261630..146261638,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr4:146261630..146261638, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr5:84867331..84867340,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr5:84867331..84867340, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr8:15939682..15939688, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr10:73818867..73818877,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr10:73818867..73818877, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr5:84867331..84867340,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr5:84867331..84867340, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr11:86501675..86501685,+#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p29@PRSS23 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr11:86501675..86501685,+#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p29@PRSS23 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:146261581..146261590,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr4:146261581..146261590, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr11:63331619..63331629,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p7@AK025029 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr11:63331619..63331629,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p7@AK025029 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:146261630..146261638,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr4:146261630..146261638, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr8:15939682..15939688, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:146261581..146261590,-#_5ee73595fdbfaa4bf8fb5c3fc773d69d | p@chr4:146261581..146261590, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:33297946..33297962,-#_afc86edc0d73fdc61ec1f452694b7e36 | p1@ENST00000510327 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr7:144570766..144570771,+#_afc86edc0d73fdc61ec1f452694b7e36 | p@chr7:144570766..144570771, + |
